gnu: tabixpp: Update to 1.1.0.

* gnu/packages/bioinformatics.scm (tabixpp): Update to 1.1.0.
[source]: Add snippet to remove vendored library.
[arguments]: Adjust custom 'build phase to fix INCLUDES.
This commit is contained in:
Efraim Flashner 2020-01-08 11:30:36 +02:00
parent 2673620f24
commit 612d6a8e5b
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1 changed files with 7 additions and 2 deletions

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@ -14869,7 +14869,7 @@ mutations from scRNA-Seq data.")
(define-public tabixpp
(package
(name "tabixpp")
(version "1.0.0")
(version "1.1.0")
(source (origin
(method git-fetch)
(uri (git-reference
@ -14877,7 +14877,11 @@ mutations from scRNA-Seq data.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "08vx6nsipk971cyr8z53rnzwkvlld63kcn1fw0pwddynz91xfny8"))))
(base32 "1k2a3vbq96ic4lw72iwp5s3mwwc4xhdffjj584yn6l9637q9j1yd"))
(modules '((guix build utils)))
(snippet
`(begin
(delete-file-recursively "htslib") #t))))
(build-system gnu-build-system)
(inputs
`(("htslib" ,htslib)
@ -14893,6 +14897,7 @@ mutations from scRNA-Seq data.")
(let ((htslib-ref (assoc-ref inputs "htslib")))
(invoke "make"
(string-append "HTS_LIB=" htslib-ref "/lib/libhts.a")
(string-append "INCLUDES= -I" htslib-ref "/include/htslib")
"HTS_HEADERS=" ; No need to check for headers here.
(string-append "LIBPATH=-L. -L" htslib-ref "/include")))))
(replace 'install