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640 Commits

Author SHA1 Message Date
Roel Janssen a38bf7c843
gnu: Add r-deconstructsigs. 
* gnu/packages/bioconductor.scm (r-deconstructsigs): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2020-01-27 22:31:19 +01:00
Ricardo Wurmus 0dfaebfa2e
gnu: r-multiassayexperiment: Update to 1.12.2. 
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.2.
 2020-01-27 20:48:36 +01:00
Ricardo Wurmus c5d75df366
gnu: r-ropls: Update to 1.18.8. 
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.18.8.
 2020-01-27 20:48:36 +01:00
Ricardo Wurmus 062cbc4f2b
gnu: r-destiny: Update to 3.0.1. 
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.0.1.
 2020-01-27 20:48:36 +01:00
Ricardo Wurmus fd6412cd2c
gnu: r-metap: Update to 1.3. 
* gnu/packages/bioconductor.scm (r-metap): Update to 1.3.
 2020-01-27 16:33:27 +01:00
Vagrant Cascadian 5b98473a1f
gnu: r-biocset: Fix spelling of "ability". 
* gnu/packages/bioconductor (r-biocset)[description]: Fix typo.
 2020-01-24 02:38:13 -08:00
Tobias Geerinckx-Rice 99db6db7be
gnu: Use HTTPS for bioconductor.org. 
* gnu/packages/bioinformatics.scm (r-homo-sapiens)[source]: Use HTTPS.
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9-masked,
r-cghcall, r-diffbind, r-cghbase, r-ripseeker, r-chippeakanno,
r-qdnaseq, r-marray, r-multtest)[home-page]: Likewise.
* gnu/packages/graph.scm (r-rgraphviz)[home-page]: Likewise.
 2020-01-21 00:43:39 +01:00
Ricardo Wurmus d1ac643062
gnu: r-variancepartition: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.16.1.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus e8ccb98a08
gnu: r-flowworkspace: Update to 3.34.1. 
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 3.34.1.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus 3f42bd81a5
gnu: r-ropls: Update to 1.18.6. 
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.18.6.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus 516fa945b3
gnu: r-mlinterfaces: Update to 1.66.2. 
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.2.
[propagated-inputs]: Remove r-rda.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus ac9a9c374c
gnu: r-clusterprofiler: Update to 3.14.3. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.14.3.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus 99e2a24978
gnu: r-inspect: Update to 1.16.2. 
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.2.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus 7a8fcdaccc
gnu: r-regioner: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.18.1.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus f8f181ae41
gnu: r-affycoretools: Update to 1.58.4. 
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.58.4.
[propagated-inputs]: Add r-glimma.
 2020-01-16 06:53:31 +01:00
Ricardo Wurmus bd824de3ad
gnu: r-inspect: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.1.
[propagated-inputs]: Add r-gdata.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus c314ff7cd4
gnu: r-multiassayexperiment: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.1.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus 0718948912
gnu: r-rgadem: Update to 2.34.1. 
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.34.1.
[propagated-inputs]: Add r-genomicranges.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus 0be4d7de9c
gnu: r-clusterprofiler: Update to 3.14.2. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.14.2.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus 7621bf2d19
gnu: r-enrichplot: Update to 1.6.1. 
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.6.1.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus eb6d1adf15
gnu: r-biocsingular: Update to 1.2.1. 
* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.2.1.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus be94400cd4
gnu: r-affycoretools: Update to 1.58.3. 
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.58.3.
 2019-12-27 21:30:26 +01:00
Ricardo Wurmus 77e2de3654
gnu: Add r-biodist. 
* gnu/packages/bioconductor.scm (r-biodist): New variable.
 2019-12-18 15:29:08 +01:00
Ricardo Wurmus 0156297f29
gnu: Add r-biocworkflowtools. 
* gnu/packages/bioconductor.scm (r-biocworkflowtools): New variable.
 2019-12-18 15:29:08 +01:00
Ricardo Wurmus 43b66e3f7c
gnu: Add r-biocset. 
* gnu/packages/bioconductor.scm (r-biocset): New variable.
 2019-12-18 15:29:08 +01:00
Ricardo Wurmus 4a18112dfb
gnu: Add r-biocpkgtools. 
* gnu/packages/bioconductor.scm (r-biocpkgtools): New variable.
 2019-12-18 15:29:08 +01:00
Ricardo Wurmus 4d12c1e335
gnu: Add r-biocor. 
* gnu/packages/bioconductor.scm (r-biocor): New variable.
 2019-12-18 15:29:08 +01:00
Ricardo Wurmus c2b36a0441
gnu: Add r-bioconcotk. 
* gnu/packages/bioconductor.scm (r-bioconcotk): New variable.
 2019-12-18 15:29:08 +01:00
Ricardo Wurmus 0678479391
gnu: Add r-multiassayexperiment. 
* gnu/packages/bioconductor.scm (r-multiassayexperiment): New variable.
 2019-12-18 15:29:08 +01:00
Ricardo Wurmus 244270e6ae
gnu: Add r-experimenthub. 
* gnu/packages/bioconductor.scm (r-experimenthub): New variable.
 2019-12-18 15:29:07 +01:00
Ricardo Wurmus 49f0860be0
gnu: Add r-biocgraph. 
* gnu/packages/bioconductor.scm (r-biocgraph): New variable.
 2019-12-18 15:29:07 +01:00
Ricardo Wurmus f180be2923
gnu: Add r-bioccasestudies. 
* gnu/packages/bioconductor.scm (r-bioccasestudies): New variable.
 2019-12-18 15:29:07 +01:00
Ricardo Wurmus 21afe920f1
gnu: Add r-ebarrays. 
* gnu/packages/bioconductor.scm (r-ebarrays): New variable.
 2019-12-18 15:29:07 +01:00
Ricardo Wurmus f388834e11
gnu: Add r-reactomepa. 
* gnu/packages/bioconductor.scm (r-reactomepa): New variable.
 2019-12-18 15:29:07 +01:00
Ricardo Wurmus c373223e63
gnu: Add r-graphite. 
* gnu/packages/bioconductor.scm (r-graphite): New variable.
 2019-12-18 15:29:07 +01:00
Ricardo Wurmus ff1146b9b1
gnu: Add r-curatedtcgadata. 
* gnu/packages/bioconductor.scm (r-curatedtcgadata): New variable.
 2019-12-18 15:29:07 +01:00
Ricardo Wurmus 6f15ea2415
gnu: Add r-reactome-db. 
* gnu/packages/bioconductor.scm (r-reactome-db): New variable.
 2019-12-18 15:29:07 +01:00
Ricardo Wurmus 29fd736a66
gnu: Add r-biobroom. 
* gnu/packages/bioconductor.scm (r-biobroom): New variable.
 2019-12-17 20:02:18 +01:00
Ricardo Wurmus 48bcbef07a
gnu: Add r-bioassayr. 
* gnu/packages/bioconductor.scm (r-bioassayr): New variable.
 2019-12-17 20:02:18 +01:00
Ricardo Wurmus 991554fc92
gnu: Add r-chemminer. 
* gnu/packages/bioconductor.scm (r-chemminer): New variable.
 2019-12-17 20:02:18 +01:00
Ricardo Wurmus d38775b13f
gnu: Add r-bigpint. 
* gnu/packages/bioconductor.scm (r-bigpint): New variable.
 2019-12-17 20:02:18 +01:00
Ricardo Wurmus 820373dbc8
gnu: Add r-bigmemoryextras. 
* gnu/packages/bioconductor.scm (r-bigmemoryextras): New variable.
 2019-12-17 20:02:18 +01:00
Ricardo Wurmus 6ca6f8663b
gnu: Add r-biggr. 
* gnu/packages/bioconductor.scm (r-biggr): New variable.
 2019-12-17 20:02:17 +01:00
Ricardo Wurmus 5aef09bd0e
gnu: Add r-hyperdraw. 
* gnu/packages/bioconductor.scm (r-hyperdraw): New variable.
 2019-12-17 20:02:17 +01:00
Ricardo Wurmus 75a8bb3185
gnu: Add r-hypergraph. 
* gnu/packages/bioconductor.scm (r-hypergraph): New variable.
 2019-12-17 20:02:17 +01:00
Ricardo Wurmus e823337c6e
gnu: Add r-rsbml. 
* gnu/packages/bioconductor.scm (r-rsbml): New variable.
 2019-12-17 20:02:17 +01:00
Ricardo Wurmus 40fe63ad8a
gnu: Add r-bifet. 
* gnu/packages/bioconductor.scm (r-bifet): New variable.
 2019-12-17 20:02:17 +01:00
Ricardo Wurmus de9374b73c
gnu: Add r-bicare. 
* gnu/packages/bioconductor.scm (r-bicare): New variable.
 2019-12-17 20:02:17 +01:00
Ricardo Wurmus 6bd50acf41
gnu: Add r-bhc. 
* gnu/packages/bioconductor.scm (r-bhc): New variable.
 2019-12-17 20:02:16 +01:00
Ricardo Wurmus 75eb1149f3
gnu: Add r-bgx. 
* gnu/packages/bioconductor.scm (r-bgx): New variable.
 2019-12-17 20:02:16 +01:00