diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm new file mode 100644 index 0000000..f340380 --- /dev/null +++ b/gnu/packages/python-xyz.scm @@ -0,0 +1,21418 @@ +;;; GNU Guix --- Functional package management for GNU +;;; Copyright © 2013 Nikita Karetnikov +;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020 Ludovic Courtès +;;; Copyright © 2013, 2014, 2015, 2016, 2019 Andreas Enge +;;; Copyright © 2014, 2015 Mark H Weaver +;;; Copyright © 2014, 2017 Eric Bavier +;;; Copyright © 2014, 2015 Federico Beffa +;;; Copyright © 2015 Omar Radwan +;;; Copyright © 2015 Pierre-Antoine Rault +;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Ricardo Wurmus +;;; Copyright © 2015, 2016, 2020 Christopher Allan Webber +;;; Copyright © 2015 Eric Dvorsak +;;; Copyright © 2015, 2016 David Thompson +;;; Copyright © 2015, 2016, 2017, 2019 Leo Famulari +;;; Copyright © 2015, 2017 Ben Woodcroft +;;; Copyright © 2015, 2016 Erik Edrosa +;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Efraim Flashner +;;; Copyright © 2015, 2017 Kyle Meyer +;;; Copyright © 2015, 2016 Chris Marusich +;;; Copyright © 2016 Danny Milosavljevic +;;; Copyright © 2016 Lukas Gradl +;;; Copyright © 2016, 2018, 2019 Hartmut Goebel +;;; Copyright © 2016 Daniel Pimentel +;;; Copyright © 2016 Sou Bunnbu +;;; Copyright © 2016, 2017 Troy Sankey +;;; Copyright © 2016, 2017 Nikita +;;; Copyright © 2016 Dylan Jeffers +;;; Copyright © 2016 David Craven +;;; Copyright © 2016, 2017, 2018, 2019, 2020 Marius Bakke +;;; Copyright © 2016, 2017 Stefan Reichör +;;; Copyright © 2016, 2017, 2019 Alex Vong +;;; Copyright © 2016, 2017, 2018 Arun Isaac +;;; Copyright © 2016, 2017, 2018, 2020 Julien Lepiller +;;; Copyright © 2016, 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice +;;; Copyright © 2016, 2017 Thomas Danckaert +;;; Copyright © 2017 Carlo Zancanaro +;;; Copyright © 2017 Frederick M. Muriithi +;;; Copyright © 2017, 2018 Adriano Peluso +;;; Copyright © 2017 Ben Sturmfels +;;; Copyright © 2017, 2018, 2019 Mathieu Othacehe +;;; Copyright © 2017 José Miguel Sánchez García +;;; Copyright © 2017, 2020 Roel Janssen +;;; Copyright © 2017, 2018, 2019 Kei Kebreau +;;; Copyright © 2017 Rutger Helling +;;; Copyright © 2017 Muriithi Frederick Muriuki +;;; Copyright © 2017, 2019 Brendan Tildesley +;;; Copyright © 2018 Ethan R. Jones +;;; Copyright © 2018 Vijayalakshmi Vedantham +;;; Copyright © 2018 Mathieu Lirzin +;;; Copyright © 2018 Adam Massmann +;;; Copyright © 2016, 2018 Tomáš Čech +;;; Copyright © 2018, 2019, 2020 Nicolas Goaziou +;;; Copyright © 2018 Oleg Pykhalov +;;; Copyright © 2018, 2019 Clément Lassieur +;;; Copyright © 2018, 2019, 2020 Maxim Cournoyer +;;; Copyright © 2018 Luther Thompson +;;; Copyright © 2018 Vagrant Cascadian +;;; Copyright © 2019, 2020 Brett Gilio +;;; Copyright © 2019 Sam +;;; Copyright © 2019 Jack Hill +;;; Copyright © 2019, 2020 Guillaume Le Vaillant +;;; Copyright © 2019, 2020 Alex Griffin +;;; Copyright © 2019, 2020 Pierre Langlois +;;; Copyright © 2019 Jacob MacDonald +;;; Copyright © 2019, 2020 Giacomo Leidi +;;; Copyright © 2019 Wiktor Żelazny +;;; Copyright © 2019, 2020 Tanguy Le Carrour +;;; Copyright © 2019 Mădălin Ionel Patrașcu +;;; Copyright © 2020 Riku Viitanen +;;; Copyright © 2020 Jakub Kądziołka +;;; Copyright © 2020 sirgazil +;;; Copyright © 2020 Sebastian Schott +;;; Copyright © 2020 Alexandros Theodotou +;;; Copyright © 2020 Josh Marshall +;;; Copyright © 2020 Alexandros Theodotou +;;; Copyright © 2020 Lars-Dominik Braun +;;; Copyright © 2020 Alex ter Weele +;;; Copyright © 2020 Matthew Kraai +;;; Copyright © 2020 Ryan Prior +;;; Copyright © 2020 Josh Holland +;;; Copyright © 2020 Yuval Kogman +;;; Copyright © 2020 Michael Rohleder +;;; Copyright © 2020 Vinicius Monego +;;; Copyright © 2020 Guy Fleury Iteriteka +;;; +;;; This file is part of GNU Guix. +;;; +;;; GNU Guix is free software; you can redistribute it and/or modify it +;;; under the terms of the GNU General Public License as published by +;;; the Free Software Foundation; either version 3 of the License, or (at +;;; your option) any later version. +;;; +;;; GNU Guix is distributed in the hope that it will be useful, but +;;; WITHOUT ANY WARRANTY; without even the implied warranty of +;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +;;; GNU General Public License for more details. +;;; +;;; You should have received a copy of the GNU General Public License +;;; along with GNU Guix. If not, see . + +(define-module (gnu packages python-xyz) + #:use-module ((guix licenses) #:prefix license:) + #:use-module (gnu packages) + #:use-module (gnu packages algebra) + #:use-module (gnu packages adns) + #:use-module (gnu packages attr) + #:use-module (gnu packages backup) + #:use-module (gnu packages bash) + #:use-module (gnu packages check) + #:use-module (gnu packages cmake) + #:use-module (gnu packages compression) + #:use-module (gnu packages crypto) + #:use-module (gnu packages databases) + #:use-module (gnu packages dbm) + #:use-module (gnu packages enchant) + #:use-module (gnu packages file) + #:use-module (gnu packages fontutils) + #:use-module (gnu packages gcc) + #:use-module (gnu packages geo) + #:use-module (gnu packages ghostscript) + #:use-module (gnu packages gl) + #:use-module (gnu packages glib) + #:use-module (gnu packages gnome) + #:use-module (gnu packages graphviz) + #:use-module (gnu packages graphics) + #:use-module (gnu packages gsasl) + #:use-module (gnu packages gstreamer) + #:use-module (gnu packages gtk) + #:use-module (gnu packages icu4c) + #:use-module (gnu packages image) + #:use-module (gnu packages imagemagick) + #:use-module (gnu packages kerberos) + #:use-module (gnu packages libevent) + #:use-module (gnu packages libffi) + #:use-module (gnu packages linux) + #:use-module (gnu packages llvm) + #:use-module (gnu packages man) + #:use-module (gnu packages maths) + #:use-module (gnu packages monitoring) + #:use-module (gnu packages multiprecision) + #:use-module (gnu packages networking) + #:use-module (gnu packages ncurses) + #:use-module (gnu packages openstack) + #:use-module (gnu packages pcre) + #:use-module (gnu packages perl) + #:use-module (gnu packages photo) + #:use-module (gnu packages pkg-config) + #:use-module (gnu packages python) + #:use-module (gnu packages python-check) + #:use-module (gnu packages python-compression) + #:use-module (gnu packages python-crypto) + #:use-module (gnu packages python-science) + #:use-module (gnu packages python-web) + #:use-module (gnu packages qt) + #:use-module (gnu packages readline) + #:use-module (gnu packages sdl) + #:use-module (gnu packages search) + #:use-module (gnu packages shells) + #:use-module (gnu packages sphinx) + #:use-module (gnu packages ssh) + #:use-module (gnu packages terminals) + #:use-module (gnu packages tex) + #:use-module (gnu packages texinfo) + #:use-module (gnu packages textutils) + #:use-module (gnu packages time) + #:use-module (gnu packages tls) + #:use-module (gnu packages version-control) + #:use-module (gnu packages video) + #:use-module (gnu packages web) + #:use-module (gnu packages base) + #:use-module (gnu packages xml) + #:use-module (gnu packages xorg) + #:use-module (gnu packages xdisorg) + #:use-module (gnu packages tcl) + #:use-module (gnu packages bdw-gc) + #:use-module (gnu packages serialization) + #:use-module (guix packages) + #:use-module (guix download) + #:use-module (guix git-download) + #:use-module (guix hg-download) + #:use-module (guix utils) + #:use-module (guix build-system gnu) + #:use-module (guix build-system cmake) + #:use-module (guix build-system python) + #:use-module (guix build-system trivial) + #:use-module (srfi srfi-1) + #:use-module (srfi srfi-26)) + +(define-public python-tenacity + (package + (name "python-tenacity") + (version "6.1.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "tenacity" version)) + (sha256 + (base32 + "1j36v9fcpmmd4985ix0cwnvcq71rkrn5cjiiv0id9vkl4kpxh0gv")))) + (build-system python-build-system) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm) + ("python-sphinx" ,python-sphinx) + ("python-tornado" ,python-tornado) + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-six" ,python-six))) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest") + #t))))) + (home-page "https://github.com/jd/tenacity") + (synopsis "Retrying library for python") + (description "Tenacity is a general-purpose python library to simplify the +task of adding retry behavior to just about anything.") + (license license:asl2.0))) + +(define-public python-colorlog + (package + (name "python-colorlog") + (version "4.1.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "colorlog" version)) + (sha256 + (base32 + "1lpk8zmfv8vz090h5d0hzb4n39wgasxdd3x3bpn3v1x1n9dfzaih")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; Extend PYTHONPATH so the built package will be found. + (setenv "PYTHONPATH" + (string-append (getcwd) "/build/lib:" + (getenv "PYTHONPATH"))) + (invoke "pytest" "-p" "no:logging") + #t))))) + (home-page "https://github.com/borntyping/python-colorlog") + (synopsis "Log formatting with colors for python") + (description "The @code{colorlog.ColoredFormatter} is a formatter for use +with Python's logging module that outputs records using terminal colors.") + (license license:expat))) + +(define-public python-pyprind + (package + (name "python-pyprind") + (version "2.11.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "PyPrind" version)) + (sha256 + (base32 + "0xg6m5hr33h9bdlrr42kc58jm2m87a9zsagy7n2m4n407d2snv64")))) + (build-system python-build-system) + (propagated-inputs + `(("python-psutil" ,python-psutil))) + (home-page "https://github.com/rasbt/pyprind") + (synopsis "Python Progress Bar and Percent Indicator Utility") + (description "The PyPrind (Python Progress Indicator) module provides a +progress bar and a percentage indicator object that let you track the progress +of a loop structure or other iterative computation.") + (license license:bsd-3))) + +(define-public python-gphoto2 + (package + (name "python-gphoto2") + (version "2.2.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "gphoto2" version)) + (sha256 + (base32 + "118zm25c8mlajfl0pzssnwz4b8lamj9dgymla9rn4nla7l244a0r")))) + (build-system python-build-system) + (native-inputs + `(("pkg-config" ,pkg-config))) + (inputs + `(("libgphoto2" ,libgphoto2))) + (home-page "https://github.com/jim-easterbrook/python-gphoto2") + (synopsis "Python interface to libgphoto2") + (description "@code{python-gphoto2} is a comprehensive Python interface +(or binding) to @code{libgphoto2}. It is built using @code{SWIG} to +automatically generate the interface code.") + (license license:gpl3+))) + +(define-public python-colour + (package + (name "python-colour") + (version "0.1.5") + (source (origin + (method url-fetch) + (uri (pypi-uri "colour" version)) + (sha256 + (base32 + "1visbisfini5j14bdzgs95yssw6sm4pfzyq1n3lfvbyjxw7i485g")))) + (build-system python-build-system) + (native-inputs + `(("python-d2to1" ,python-d2to1))) + (home-page "https://github.com/vaab/colour") + (synopsis "Convert and manipulate various color representations") + (description "Pythonic way to manipulate color representations (HSL, RVB, +web, X11, ...).") + (license license:expat))) + +(define-public python-d2to1 + (package + (name "python-d2to1") + (version "0.2.12.post1") + (source (origin + (method url-fetch) + (uri (pypi-uri "d2to1" version)) + (sha256 + (base32 + "09fq7pq1z8d006xh5z75rm2lk61v6yn2xhy53z4gsgibhqb2vvs9")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/embray/d2to1") + (synopsis "Allows for distutils2-like setup.cfg files as package metadata +in python") + (description "The python package d2to1 (the d is for distutils) allows +using distutils2-like setup.cfg files for a package's metadata with a +distribute/setuptools setup.py script.") + (license license:bsd-2))) + +(define-public python-rawkit + (package + (name "python-rawkit") + (version "0.6.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "rawkit" version)) + (sha256 + (base32 + "0vrhrpr70i61y5q5ysk341x1539ff1q1k82g59zq69lv16s0f76s")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-mock" ,python-mock))) + (inputs + `(("libraw" ,libraw))) + (home-page "https://rawkit.readthedocs.io") + (synopsis "Ctypes-based LibRaw binding for Python") + (description "The rawkit package provides two modules: rawkit and libraw. +The rawkit module provides a high-level Pythonic interface for developing raw +photos, while the libraw module provides a CTypes based interface for +interacting with the low-level LibRaw C APIs.") + (license license:expat))) + +(define-public python-easygui + (package + (name "python-easygui") + (version "0.98.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "easygui" version)) + (sha256 + (base32 + "1zmvmwgxyzvm83818skhn8b4wrci4kmnixaax8q3ia5cn7xrmj6v")))) + (build-system python-build-system) + (propagated-inputs + `(("python-tkinter" ,python "tk"))) + (home-page "https://github.com/robertlugg/easygui") + (synopsis "GUI programming module for Python") + (description "EasyGUI is a module for very simple, very easy GUI +programming in Python. EasyGUI is different from other GUI generators in that +EasyGUI is NOT event-driven. Instead, all GUI interactions are invoked by +simple function calls.") + (license license:bsd-3))) + +(define-public python-pymediainfo + (package + (name "python-pymediainfo") + (version "4.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pymediainfo" version)) + (sha256 + (base32 + "0mhpxs7vlqx8w75z93dy7nnvx89kwfdjkla03l19an15rlyqyspd")))) + (build-system python-build-system) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm) + ("python-pytest" ,python-pytest))) + (inputs + `(("libmediainfo" ,libmediainfo))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-libmediainfo + (lambda _ + (substitute* "pymediainfo/__init__.py" + (("libmediainfo.so.0") + (string-append (assoc-ref %build-inputs "libmediainfo") + "/lib/libmediainfo.so.0"))) + #t)) + (replace 'check + (lambda _ + ;; Extend PYTHONPATH so the built package will be found. + (setenv "PYTHONPATH" + (string-append (getcwd) "/build/lib:" + (getenv "PYTHONPATH"))) + ;; Skip the only failing test "test_parse_url" + (invoke "pytest" "-vv" "-k" "not test_parse_url") + #t))))) + (home-page + "https://github.com/sbraz/pymediainfo") + (synopsis + "Python wrapper for the mediainfo library") + (description + "Python wrapper for the mediainfo library to access the technical and tag +data for video and audio files.") + (license license:expat))) + +(define-public python-psutil + (package + (name "python-psutil") + (version "5.7.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "psutil" version)) + (sha256 + (base32 "1svv985vmqsls35kmvp3vhh26nsgz229324s9k29awf6qgqhm6ch")))) + (build-system python-build-system) + (arguments + ;; FIXME: some tests do not return and time out. Some tests fail because + ;; some processes survive kill(). + '(#:tests? #f)) + (home-page "https://www.github.com/giampaolo/psutil") + (synopsis "Library for retrieving information on running processes") + (description + "psutil (Python system and process utilities) is a library for retrieving +information on running processes and system utilization (CPU, memory, disks, +network) in Python. It is useful mainly for system monitoring, profiling and +limiting process resources and management of running processes. It implements +many functionalities offered by command line tools such as: ps, top, lsof, +netstat, ifconfig, who, df, kill, free, nice, ionice, iostat, iotop, uptime, +pidof, tty, taskset, pmap.") + (properties `((python2-variant . ,(delay python2-psutil)))) + (license license:bsd-3))) + +(define-public python2-psutil + (let ((base (package-with-python2 (strip-python2-variant python-psutil)))) + (package + (inherit base) + (propagated-inputs + `(("python2-enum34" ,python2-enum34) ;optional + ,@(package-propagated-inputs base)))))) + +(define-public python-shapely + (package + (name "python-shapely") + (version "1.6.4.post2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Shapely" version)) + (sha256 + (base32 + "03r42fmd9alp6r3q95ad6rldq2f7n1wimrw53zy5kpn33yv7pf64")))) + (build-system python-build-system) + (native-inputs + `(("python-cython" ,python-cython) + ("python-matplotlib" ,python-matplotlib) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov))) + (inputs + `(("geos" ,geos))) + (propagated-inputs + `(("python-numpy" ,python-numpy))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-geos-path + (lambda* (#:key inputs #:allow-other-keys) + (let ((geos (assoc-ref inputs "geos")) + (glibc (assoc-ref inputs ,(if (%current-target-system) + "cross-libc" "libc")))) + (substitute* "shapely/geos.py" + (("_lgeos = load_dll\\('geos_c', fallbacks=.*\\)") + (string-append "_lgeos = load_dll('geos_c', fallbacks=['" + geos "/lib/libgeos_c.so'])")) + (("free = load_dll\\('c'\\)\\.free") + (string-append "free = load_dll('c', fallbacks=['" + glibc "/lib/libc.so.6']).free")))) + #t))))) + (home-page "https://github.com/Toblerity/Shapely") + (synopsis "Library for the manipulation and analysis of geometric objects") + (description "Shapely is a Python package for manipulation and analysis of +planar geometric objects. It is based on the @code{GEOS} library.") + (license license:bsd-3))) + +(define-public python-shortuuid + (package + (name "python-shortuuid") + (version "0.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "shortuuid" version)) + (sha256 + (base32 + "1f8i4zwj5vmpzbz6b17bljy4399gx5aq7vsyw63sz2qgyjcd73yh")))) + (build-system python-build-system) + (native-inputs + `(("python-pep8" ,python-pep8))) + (home-page "https://github.com/skorokithakis/shortuuid") + (synopsis "Generator library for concise, unambiguous and URL-safe UUIDs") + (description + "@code{shortuuid} is a Python library for generating concise, unambiguous +and URL-safe UUIDs. UUIDs are generated using the built-in Python @code{uuid} +module and then similar looking characters are removed.") + (license license:bsd-3))) + +(define-public python-logwrap + (package + (name "python-logwrap") + (version "3.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "logwrap" version ".zip")) + (sha256 + (base32 + "1d2k0hvpbi51vl410y8fbs5m0nxnlh2k7gr2nrh3k81ibhzscsra")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six) + ("python-typing" ,python-typing))) + (native-inputs + `(("unzip" ,unzip) + ("python-cython" ,python-cython) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-runner" ,python-pytest-runner))) + (home-page "https://github.com/penguinolog/logwrap") + (synopsis "Decorator for logging function arguments") + (description "This package provides a decorator to log function arguments +and function call return values in a human-readable way.") + (license license:asl2.0))) + +(define-public python2-shapely + (package-with-python2 python-shapely)) + +(define-public python-clyent + (package + (name "python-clyent") + (version "1.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "clyent" version)) + (sha256 + (base32 + "1r9987qmy1pz3hq54160bapqsywpq14waw4w9x3ly8hmq7kpgfbj")))) + (build-system python-build-system) + (native-inputs + `(("python-mock" ,python-mock))) + (home-page "https://github.com/Anaconda-Platform/clyent") + (synopsis "Command line client library") + (description "Clyent is a Python command line utility library. It is used +by @code{binstar}, @code{binstar-build}, and @code{chalmers}.") + (license license:bsd-3))) + +(define-public python2-clyent + (package-with-python2 python-clyent)) + +(define-public python-babel + (package + (name "python-babel") + (version "2.8.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Babel" version)) + (sha256 + (base32 + "0f0f2vvs1mpdpz2c0mg1mnc3sih8bizmc1h9m67kdsnqs3i2mb0s")))) + (build-system python-build-system) + (native-inputs + `(("python-freezegun" ,python-freezegun) + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-pytz" ,python-pytz))) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest" "-vv" "-k" + (string-append + ;; XXX: These tests fail when using Pytest 4.x and + ;; Babel 2.6.0. Try removing this for later versions. + "not test_no_inherit_metazone_marker_never_in_output" + " and not test_smoke_dates" + " and not test_smoke_numbers"))))))) + (home-page "http://babel.pocoo.org/") + (synopsis + "Tools for internationalizing Python applications") + (description + "Babel is composed of two major parts: +- tools to build and work with gettext message catalogs +- a Python interface to the CLDR (Common Locale Data Repository), providing +access to various locale display names, localized number and date formatting, +etc. ") + (license license:bsd-3))) + +(define-public python2-babel + (package-with-python2 python-babel)) + +;; Sphinx < 2.0 requires this version. Remove once no longer needed. +(define-public python2-babel-2.6 + (package + (inherit python2-babel) + (version "2.6.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "Babel" version)) + (sha256 + (base32 + "08rxmbx2s4irp0w0gmn498vns5xy0fagm0fg33xa772jiks51flc")))))) + +(define-public python2-backport-ssl-match-hostname + (package + (name "python2-backport-ssl-match-hostname") + (version "3.5.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "backports.ssl_match_hostname" version)) + (sha256 + (base32 + "1wndipik52cyqy0677zdgp90i435pmvwd89cz98lm7ri0y3xjajh")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + #:tests? #f)) ; no test target + (home-page "https://bitbucket.org/brandon/backports.ssl_match_hostname") + (synopsis "Backport of ssl.match_hostname() function from Python 3.5") + (description + "This backport brings the ssl.match_hostname() function to users of +earlier versions of Python. The function checks the hostname in the +certificate returned by the server to which a connection has been established, +and verifies that it matches the intended target hostname.") + (license license:psfl))) + +(define-public python-bitarray + (package + (name "python-bitarray") + (version "1.4.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "bitarray" version)) + (sha256 + (base32 + "177fj6wbw5jln54wpp6plcqy2329wjkwqwvgz7022rrg3xfrq49g")))) + (build-system python-build-system) + (home-page "https://github.com/ilanschnell/bitarray") + (synopsis "Efficient arrays of booleans") + (description "This package provides an object type which efficiently +represents an array of booleans. Bitarrays are sequence types and behave very +much like usual lists. Eight bits are represented by one byte in a contiguous +block of memory. The user can select between two representations: +little-endian and big-endian. All of the functionality is implemented in C. +Methods for accessing the machine representation are provided. This can be +useful when bit level access to binary files is required, such as portable +bitmap image files. Also, when dealing with compressed data which uses +variable bit length encoding, you may find this module useful.") + (license license:psfl))) + +(define-public python-boolean.py + (package + (name "python-boolean.py") + (version "3.6") + (source + (origin + ;; There's no source tarball on PyPI. + (method git-fetch) + (uri (git-reference + (url "https://github.com/bastikr/boolean.py") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1wc89y73va58cj7dsx6c199zpxsy9q53dsffsdj6zmc90inqz6qs")))) + (build-system python-build-system) + (home-page "https://github.com/bastikr/boolean.py") + (synopsis "Boolean algebra in one Python module") + (description + "This is a small Python library that implements boolean algebra. +It defines two base elements, @code{TRUE} and @code{FALSE}, and a +@code{Symbol} class that can take on one of these two values. Calculations +are done only in terms of @code{AND}, @code{OR}, and @code{NOT}---other +compositions like @code{XOR} and @code{NAND} are emulated on top of them. +Expressions are constructed from parsed strings or directly in Python.") + (license license:bsd-2))) + +(define-public python-hdf4 + (package + (name "python-hdf4") + (version "0.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri name version)) + (sha256 + (base32 + "1hjiyrxvxk9817qyqky3nar4y3fs4z8wxz0n884zzb5wi6skrjks")))) + (build-system python-build-system) + (native-inputs `(("nose" ,python-nose))) + (propagated-inputs `(("numpy" ,python-numpy))) + (inputs + `(("hdf4" ,hdf4) + ("libjpeg" ,libjpeg-turbo) + ("zlib" ,zlib))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; The 'runexamples' script sets PYTHONPATH to CWD, then goes + ;; on to import numpy. Somehow this works on their CI system. + ;; Let's just manage PYTHONPATH here instead. + (substitute* "runexamples.sh" + (("export PYTHONPATH=.*") "")) + (setenv "PYTHONPATH" + (string-append (getcwd) ":" + (getenv "PYTHONPATH"))) + (invoke "./runexamples.sh") + (invoke "nosetests" "-v")))))) + (home-page "https://github.com/fhs/python-hdf4") + (synopsis "Python interface to the NCSA HDF4 library") + (description + "Python-HDF4 is a python wrapper around the NCSA HDF version 4 library, +which implements the SD (Scientific Dataset), VS (Vdata) and V (Vgroup) API’s. +NetCDF files can also be read and modified. Python-HDF4 is a fork of +@url{http://hdfeos.org/software/pyhdf.php,pyhdf}.") + (license license:expat))) + +(define-public python2-hdf4 + (package-with-python2 python-hdf4)) + +(define-public python-h5py + (package + (name "python-h5py") + (version "2.10.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "h5py" version)) + (sha256 + (base32 + "0baipzv8n93m0dq0riyi8rfhzrjrfrfh8zqhszzp1j2xjac2fhc4")))) + (build-system python-build-system) + (arguments + `(#:tests? #f ; no test target + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-hdf5-paths + (lambda* (#:key inputs #:allow-other-keys) + (let ((prefix (assoc-ref inputs "hdf5"))) + (substitute* "setup_build.py" + (("\\['/opt/local/lib', '/usr/local/lib'\\]") + (string-append "['" prefix "/lib" "']")) + (("'/opt/local/include', '/usr/local/include'") + (string-append "'" prefix "/include" "'"))) + (substitute* "setup_configure.py" + (("\\['/usr/local/lib', '/opt/local/lib'\\]") + (string-append "['" prefix "/lib" "']"))) + #t)))))) + (propagated-inputs + `(("python-six" ,python-six) + ("python-numpy" ,python-numpy))) + (inputs + `(("hdf5" ,hdf5-1.10))) + (native-inputs + `(("python-cython" ,python-cython) + ("python-pkgconfig" ,python-pkgconfig) + ("pkg-config" ,pkg-config))) + (home-page "https://www.h5py.org/") + (synopsis "Read and write HDF5 files from Python") + (description + "The h5py package provides both a high- and low-level interface to the +HDF5 library from Python. The low-level interface is intended to be a +complete wrapping of the HDF5 API, while the high-level component supports +access to HDF5 files, datasets and groups using established Python and NumPy +concepts.") + (license license:bsd-3))) + +(define-public python2-h5py + (package-with-python2 python-h5py)) + +(define-public python-sh + (package + (name "python-sh") + (version "1.12.14") + (source + (origin + (method url-fetch) + (uri (pypi-uri "sh" version)) + (sha256 + (base32 + "1z2hx357xp3v4cv44xmqp7lli3frndqpyfmpbxf7n76h7s1zaaxm")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; XXX: A Python 2 test fails when HOME=/homeless-shelter. + (setenv "HOME" "/tmp") + (invoke "python" "sh.py" "test")))))) + (native-inputs + `(("python-coverage" ,python-coverage))) + (home-page "https://github.com/amoffat/sh") + (synopsis "Python subprocess replacement") + (description "This package provides a replacement for Python's +@code{subprocess} feature.") + (license license:expat))) + +(define-public python2-sh + (package-with-python2 python-sh)) + +(define-public python-cftime + (package + (name "python-cftime") + (version "1.0.4.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cftime" version)) + (sha256 + (base32 "0w0gi6jnch38hiygl62j4xkcirv4y3dcwrvxl9p7bsk6j27lzihs")))) + (build-system python-build-system) + (propagated-inputs + `(("python-numpy" ,python-numpy))) + (native-inputs + `(("python-coveralls" ,python-coveralls) + ("python-cython" ,python-cython) + ("python-pytest-cov" ,python-pytest-cov))) + (home-page "https://github.com/Unidata/cftime") + (synopsis "Library for time handling") + (description + "This package provides time-handling functionality that used to be part +of the netcdf4 package before.") + ;; This package claims to include code under the GPLv3 but is released + ;; under ISC. + (license (list license:isc license:gpl3+)))) + +(define-public python-netcdf4 + (package + (name "python-netcdf4") + (version "1.5.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "netCDF4" version)) + (sha256 + (base32 + "1gn35mb2yc263pci720aik8ymz41lrvxlrn3z83vyjwghiashg1a")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'configure-locations + (lambda* (#:key inputs #:allow-other-keys) + (setenv "HDF5_DIR" (assoc-ref inputs "hdf5")) + #t))))) + (native-inputs + `(("python-cython" ,python-cython))) + (propagated-inputs + `(("python-numpy" ,python-numpy) + ("python-cftime" ,python-cftime))) + (inputs + `(("netcdf" ,netcdf) + ("hdf4" ,hdf4) + ("hdf5" ,hdf5))) + (home-page "https://github.com/Unidata/netcdf4-python") + (synopsis "Python/numpy interface to the netCDF library") + (description "Netcdf4-python is a Python interface to the netCDF C +library. netCDF version 4 has many features not found in earlier +versions of the library and is implemented on top of HDF5. This module +can read and write files in both the new netCDF 4 and the old netCDF 3 +format, and can create files that are readable by HDF5 clients. The +API is modelled after @code{Scientific.IO.NetCDF}, and should be familiar +to users of that module.") + ;; The software is mainly ISC, but includes some files covered + ;; by the Expat license. + (license (list license:isc license:expat)))) + +(define-public python2-netcdf4 + (package-with-python2 python-netcdf4)) + +(define-public python-license-expression + (package + (name "python-license-expression") + (version "0.999") + (source + (origin + (method url-fetch) + (uri (pypi-uri "license-expression" version)) + (sha256 + (base32 "08ppb0bxbrsxazy88sgpl9yffvdsabw6dkk1nc332wcz2mphwwyf")))) + (build-system python-build-system) + (propagated-inputs + `(("python-boolean.py" ,python-boolean.py))) + (home-page "https://github.com/nexB/license-expression") + (synopsis "Apply boolean logic to license expressions") + (description + "This Python module defines a tiny language to evaluate and compare +license expressions using boolean logic. Logical combinations of licenses can +be tested for equality, containment, and equivalence. They can be normalised +and simplified. It supports SPDX license expressions as well as other naming +conventions and aliases in the same expression.") + (license license:gpl2+))) + +(define-public python-lockfile + (package + (name "python-lockfile") + (version "0.12.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "lockfile" version)) + (sha256 + (base32 + "16gpx5hm73ah5n1079ng0vy381hl802v606npkx4x8nb0gg05vba")))) + (build-system python-build-system) + (arguments '(#:test-target "check")) + (native-inputs + `(("python-pbr" ,python-pbr))) + (home-page "https://launchpad.net/pylockfile") + (synopsis "Platform-independent file locking module") + (description + "The lockfile package exports a LockFile class which provides a simple +API for locking files.") + (license license:expat))) + +(define-public python2-lockfile + (package-with-python2 python-lockfile)) + +(define-public python-filelock + (package + (name "python-filelock") + (version "3.0.12") + (source + (origin + (method url-fetch) + (uri (pypi-uri "filelock" version)) + (sha256 + (base32 + "0ngzlvb5j8gqs2nxlp2b0jhzii792h66wsn694qm8kqixr225n0q")))) + (build-system python-build-system) + (home-page + "https://github.com/benediktschmitt/py-filelock") + (synopsis "Platform independent file lock") + (description "@code{filelock} contains a single module implementing +a platform independent file lock in Python, which provides a simple way of +inter-process communication.") + (license license:unlicense))) + +(define-public python-semantic-version + (package + (name "python-semantic-version") + (version "2.6.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "semantic_version" version)) + (sha256 + (base32 + "1h2l9xyg1zzsda6kjcmfcgycbvrafwci283vcr1v5sbk01l2hhra")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ; PyPI tarball lacks tests + (home-page "https://github.com/rbarrois/python-semanticversion") + (synopsis "Semantic versioning module for Python") + (description + "The @code{semantic_version} class is a small library for handling +@uref{https://semver.org/, semantic versioning} (@dfn{SemVer}) in Python. + +It can compare versions, generate a new version that represents a bump in one of +the version levels, and check whether any given string is a proper semantic +version identifier.") + (license license:bsd-3))) + +(define-public python2-semantic-version + (package-with-python2 python-semantic-version)) + +(define-public python-serpent + (package + (name "python-serpent") + (version "1.28") + (source + (origin + (method url-fetch) + (uri (pypi-uri "serpent" version)) + (sha256 + (base32 "1arnckykpkvv2qrp49l1k7q5mr5pisswl0rvdx98x8wsl1n361pk")))) + (build-system python-build-system) + (native-inputs + `(("python-attrs" ,python-attrs) + ("python-pytz" ,python-pytz))) + (home-page "https://github.com/irmen/Serpent") + (synopsis "Serializer for literal Python expressions") + (description + "Serpent provides @code{ast.literal_eval()}-compatible object tree +serialization. It serializes an object tree into bytes (an utf-8 encoded +string) that can be decoded and then passed as-is to @code{ast.literal_eval()} +to rebuild the original object tree. + +Because only safe literals are encoded, it is safe to send serpent data to +other machines, such as over the network.") + (properties `((python2-variant . ,(delay python2-serpent)))) + (license license:expat))) + +(define-public python2-serpent + (let ((base (package-with-python2 (strip-python2-variant python-serpent)))) + (package + (inherit base) + (propagated-inputs + `(("python-enum34" ,python2-enum34) + ,@(package-propagated-inputs base)))))) + +(define-public python-setuptools + (package + (name "python-setuptools") + (version "41.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "setuptools" version ".zip")) + (sha256 + (base32 + "04sns22y2hhsrwfy1mha2lgslvpjsjsz8xws7h2rh5a7ylkd28m2")) + (modules '((guix build utils))) + (snippet + '(begin + ;; Remove included binaries which are used to build self-extracting + ;; installers for Windows. + ;; TODO: Find some way to build them ourself so we can include them. + (for-each delete-file (find-files "setuptools" "^(cli|gui).*\\.exe$")) + #t)))) + (build-system python-build-system) + ;; FIXME: Tests require pytest, which itself relies on setuptools. + ;; One could bootstrap with an internal untested setuptools. + (arguments + `(#:tests? #f)) + (home-page "https://pypi.org/project/setuptools/") + (synopsis + "Library designed to facilitate packaging Python projects") + (description + "Setuptools is a fully-featured, stable library designed to facilitate +packaging Python projects, where packaging includes: +Python package and module definitions, +distribution package metadata, +test hooks, +project installation, +platform-specific details, +Python 3 support.") + ;; TODO: setuptools now bundles the following libraries: + ;; packaging, pyparsing, six and appdirs. How to unbundle? + (license (list license:psfl ; setuptools itself + license:expat ; six, appdirs, pyparsing + license:asl2.0 ; packaging is dual ASL2/BSD-2 + license:bsd-2)))) + +(define-public python2-setuptools + (package-with-python2 python-setuptools)) + +;; The setuptools provided by Python 3.7.4 is too new for Tensorflow. +(define-public python-setuptools-for-tensorflow + (hidden-package + (package + (inherit python-setuptools) + (version "39.1.0") + (source (origin + (inherit (package-source python-setuptools)) + (uri (pypi-uri "setuptools" version ".zip")) + (sha256 + (base32 + "1mzdhvfhnv4lggxa8rjl0dzqxvfx377gg5sqs57v89wrp09lwj65"))))))) + +(define-public python-uniseg + (package + (name "python-uniseg") + (version "0.7.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "uniseg" version ".zip")) + (sha256 + (base32 + "05jsazvz6nbmh6l3v1rph5ydkqn1hzx1pyggdyvgp2qgmgrnmiz2")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; The test suite requires network access. + (native-inputs + `(("unzip" ,unzip))) + (home-page + "https://bitbucket.org/emptypage/uniseg-python") + (synopsis + "Python library to determine Unicode text segmentations") + (description + "Uniseg is a Python package used to determine Unicode text segmentations. +Supported segmentations include: +@enumerate +@item @dfn{Code point} (any value in the Unicode codespace) +@item @dfn{Grapheme cluster} (user-perceived character made of a single or +multiple Unicode code points, e.g. \"G\" + acute-accent) +@item Word break +@item Sentence break +@item Line break +@end enumerate") + (license license:expat))) + +(define-public python2-uniseg + (package-with-python2 python-uniseg)) + +(define-public python-humanfriendly + (package + (name "python-humanfriendly") + (version "8.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "humanfriendly" version)) + (sha256 + (base32 + "04ixg8b7p6xc8x8lffhi7wfl77xhszakhd0s6j0cf6a84j8yqlmz")))) + (build-system python-build-system) + (arguments + `(;; XXX: Tests depend on coloredlogs, which in turn depends on humanfriendly. + #:tests? #f)) + (home-page "https://humanfriendly.readthedocs.io") + (synopsis "Human-friendly input and output in Python") + (description + "The functions and classes in @code{humanfriendly} can be used to make +text interfaces more user-friendly. It includes tools to parse and format +numbers, file sizes, and timespans, timers for long-running operations, menus +to allow the user to choose from a list of options, and terminal interaction +helpers.") + (properties `((python2-variant . ,(delay python2-humanfriendly)))) + (license license:expat))) + +(define-public python2-humanfriendly + (let ((base (package-with-python2 + (strip-python2-variant python-humanfriendly)))) + (package (inherit base) + (propagated-inputs + `(("python2-monotonic" ,python2-monotonic) + ,@(package-propagated-inputs base)))))) + +(define-public python-textparser + (package + (name "python-textparser") + (version "0.23.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "textparser" version)) + (sha256 + (base32 + "0w5lyhrsvzs5a9q1l3sjgxgljrvd3ybf796w93kc39wayzvd02gh")))) + (build-system python-build-system) + (home-page "https://github.com/eerimoq/textparser") + (synopsis "Fast text parser for Python") + (description "This library provides a text parser written in the Python +language. It aims to be fast.") + (license license:expat))) + +(define-public python-aenum + (package + (name "python-aenum") + (version "2.2.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "aenum" version)) + (sha256 + (base32 + "1s3008rklv4n1kvmq6xdbdfyrpl0gf1rhqasmd27s5kwyjmlqcx4")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (format #t "current working dir ~s~%" (getcwd)) + (setenv "PYTHONPATH" + (string-append ".:" (getenv "PYTHONPATH"))) + ;; We must run the test suite module directly, as it + ;; fails to define the 'tempdir' variable in scope for + ;; the tests otherwise + ;; (see:https://bitbucket.org/stoneleaf/aenum/\ + ;; issues/32/running-tests-with-python-setuppy-test). + (invoke "python3" "aenum/test.py") + ;; This one fails with "NameError: name + ;; 'test_pickle_dump_load' is not defined" (see: + ;; https://bitbucket.org/stoneleaf/aenum/issues/33 + ;; /error-running-the-test_v3py-test-suite). + ;; (invoke "python3" "aenum/test_v3.py") + #t))))) + (home-page "https://bitbucket.org/stoneleaf/aenum") + (synopsis "Advanced enumerations, namedtuples and constants for Python") + (description "The aenum library includes an @code{Enum} base class, a +metaclass-based @code{NamedTuple} implementation and a @code{NamedConstant} +class.") + (license license:bsd-3))) + +(define-public python-can + (package + (name "python-can") + (version "3.3.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-can" version)) + (sha256 + (base32 + "123lz1bl6xf3d0fvxzr4bg4884yg4m9s21z6xd2m68zhnbv9rmpc")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (add-after 'unpack 'relax-version-requirements + (lambda _ + (substitute* "setup.py" + (("mock~=2\\.0") "mock") + (("coverage<5") "coverage") + (("pytest~=4\\.3") "pytest") + (("hypothesis~=4\\.56") "hypothesis")) + #t)) + (add-after 'unpack 'fix-broken-tests + ;; The tests try to run two scripts it expects should be + ;; in PATH, but they aren't at this time (see: + ;; https://github.com/hardbyte/python-can/issues/805). + (lambda _ + (substitute* "test/test_scripts.py" + (("\"can_logger\\.py --help\"") "") + (("\"can_player\\.py --help\"") "")) + #t))))) + (propagated-inputs + `(("python-aenum" ,python-aenum) + ("python-wrapt" ,python-wrapt))) + (native-inputs + `(("python-codecov" ,python-codecov) + ("python-coverage" ,python-coverage) + ("python-future" ,python-future) + ("python-hypothesis" ,python-hypothesis) + ("python-mock" ,python-mock) + ("python-pyserial" ,python-pyserial) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-runner" ,python-pytest-runner) + ("python-pytest-timeout" ,python-pytest-timeout))) + (home-page "https://github.com/hardbyte/python-can") + (synopsis "Controller Area Network (CAN) interface module for Python") + (description "This package defines the @code{can} module, which provides +controller area network (CAN) support for Python developers; providing common +abstractions to different hardware devices, and a suite of utilities for +sending and receiving messages on a CAN bus.") + (license license:lgpl3+))) + +(define-public python-diskcache + (package + (name "python-diskcache") + (version "4.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "diskcache" version)) + (sha256 + (base32 + "1q2wz5sj16zgyy1zpq516qgbnfwsavk1pl2qks0f4r62z5cmmvmw")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ;test suite not included in the release + (home-page "http://www.grantjenks.com/docs/diskcache/") + (synopsis "Disk and file backed cache library") + (description "DiskCache is a disk and file backed persistent cache.") + (license license:asl2.0))) + +(define-public python-bitstruct + (package + (name "python-bitstruct") + (version "8.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "bitstruct" version)) + (sha256 + (base32 + "1fpc1qh1vss05ap29xvhjp200fm0q4pvgcjl0qpryh7ay6xgr5vx")))) + (build-system python-build-system) + (home-page "https://github.com/eerimoq/bitstruct") + (synopsis "Python values to and C bit field structs converter") + (description "This module performs conversions between Python values and C +bit field structs represented as Python byte strings. It is intended to have +a similar interface as the @code{struct} module from Python, but working on +bits instead of primitive data types like @code{char}, @code{int}, etc.") + (license license:expat))) + +(define-public python-cantools + (package + (name "python-cantools") + (version "33.1.1") + (source + (origin + ;; We take the sources from the Git repository as the documentation is + ;; not included with the PyPI archive. + (method git-fetch) + (uri (git-reference + (url "https://github.com/eerimoq/cantools") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1aad137yd8b4jkfvlv812qsxmxcgra7g1p4wbxfsjy1cbf8fbq9q")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'build 'build-doc + (lambda _ + ;; See: https://github.com/eerimoq/cantools/issues/190. + (substitute* "README.rst" + (("https://github.com/eerimoq/cantools/raw/master\ +/docs/monitor.png") + "monitor.png")) + (with-directory-excursion "docs" + (invoke "make" "man" "info")))) + (add-after 'install 'install-doc + (lambda* (#:key outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (info (string-append out "/share/info")) + (man1 (string-append out "/share/man/man1"))) + (format #t "CWD: ~s~%" (getcwd)) + (install-file "docs/_build/texinfo/cantools.info" info) + (install-file "docs/_build/man/cantools.1" man1) + #t)))))) + (native-inputs + `(("sphinx" ,python-sphinx) + ("texinfo" ,texinfo))) + (propagated-inputs + `(("python-bitstruct" ,python-bitstruct) + ("python-can" ,python-can) + ("python-diskcache" ,python-diskcache) + ("python-textparser" ,python-textparser))) + (home-page "https://github.com/eerimoq/cantools") + (synopsis "Tools for the Controller Area Network (CAN) bus protocol") + (description "This package includes Controller Area Network (CAN) related +tools that can be used to: +@itemize +@item parse DBC, KCD, SYM, ARXML 4 and CDD files +@item encode and decode CAN messages +@item multiplex simple and extended signals +@item diagnose DID encoding and decoding +@item dump the CAN decoder output +@item test CAN nodes +@item generate C source code +@item monitor the CAN bus +@end itemize") + (license license:expat))) + +(define-public python-capturer + (package + (name "python-capturer") + (version "2.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "capturer" version)) + (sha256 + (base32 + "05d6ji4j8ipiq0br7bwam38qc6hd9l1djmfxlzrxx19ziyjl4089")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) + (propagated-inputs + `(("python-humanfriendly" ,python-humanfriendly))) + (home-page "https://capturer.readthedocs.io") + (synopsis "Capture stdout and stderr streams of the current process") + (description + "The capturer package makes it easy to capture the stdout and stderr +streams of the current process and subprocesses. Output can be relayed +to the terminal in real time but is also available to the Python program +for additional processing.") + (license license:expat))) + +(define-public python2-capturer + (package-with-python2 python-capturer)) + +(define-public python-case + (package + (name "python-case") + (version "1.5.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "case" version)) + (sha256 + (base32 + "1cagg06vfph864s6l5jb0zqliwxh647bki8j6lf4a4qrv40jnhs8")))) + (build-system python-build-system) + (propagated-inputs + `(("python-mock" ,python-mock) + ("python-nose" ,python-nose) + ("python-six" ,python-six) + ("python-unittest2" ,python-unittest2))) + (native-inputs + `(("python-coverage" ,python-coverage))) + (home-page "https://github.com/celery/case") + (synopsis "Unittest utilities and convenience methods") + (description + "The @code{case} package provides utilities on top of unittest, including +some helpful Python 2 compatibility convenience methods.") + (license license:bsd-3))) + +(define-public python-verboselogs + (package + (name "python-verboselogs") + (version "1.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "verboselogs" version)) + (sha256 + (base32 + "09z4d1jiasn7k1hs5af2ckmnrd0i1d1m04bhfjhv7z6svzfdwgg3")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; Do not run pylint plugin test, as astroid is an old + ;; unsupported version. + (invoke "pytest" "-v" "-k" "not test_pylint_plugin" + "verboselogs/tests.py")))))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest))) + (home-page "https://verboselogs.readthedocs.io") + (synopsis "Verbose logging level for Python's logging module") + (description + "The @code{verboselogs} package extends Python's @code{logging} module to +add the log levels NOTICE, SPAM, SUCCESS and VERBOSE.") + (license license:expat))) + +(define-public python2-verboselogs + (package-with-python2 python-verboselogs)) + +(define-public python-coloredlogs + (package + (name "python-coloredlogs") + (version "10.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "coloredlogs" version)) + (sha256 + (base32 + "0dkw6xp0r1dwgz4s2f58npx5nxfq51wf4l6qkm5ib27slgfs4sdq")))) + (build-system python-build-system) + (arguments + `(;Tests require some updated modules + #:tests? #f)) + (propagated-inputs + `(("python-capturer" ,python-capturer))) + (home-page "https://coloredlogs.readthedocs.io") + (synopsis "Colored stream handler for Python's logging module") + (description + "The @code{coloredlogs} package enables colored terminal output for +Python's logging module. The @code{ColoredFormatter} class inherits from +@code{logging.Formatter} and uses ANSI escape sequences to render your logging +messages in color.") + (license license:expat))) + +(define-public python2-coloredlogs + (package-with-python2 python-coloredlogs)) + +(define-public python-editorconfig + (package + (name "python-editorconfig") + (version "0.12.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "EditorConfig" version)) + (sha256 + (base32 + "0v55z351p9qkyp3bbspwywwn28sbcknhirngjbj779n3z52z63hv")))) + (build-system python-build-system) + (home-page "https://editorconfig.org/") + (synopsis "EditorConfig bindings for python") + (description "The EditorConfig project consists of a file format for +defining coding styles and a collection of text editor plugins that enable +editors to read the file format and adhere to defined styles. EditorConfig +files are easily readable and they work nicely with version control systems.") + ;; "fnmatch.py" and "ini.py" are licensed under psfl, the rest is bsd-2. + (license (list license:bsd-2 license:psfl)))) + +(define-public python-et-xmlfile + (package + (name "python-et-xmlfile") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "et_xmlfile" version)) + (sha256 + (base32 + "0nrkhcb6jdrlb6pwkvd4rycw34y3s931hjf409ij9xkjsli9fkb1")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest")))))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-lxml" ,python-lxml))) ;used for the tests + (home-page "https://bitbucket.org/openpyxl/et_xmlfile") + (synopsis "Low memory implementation of @code{lxml.xmlfile}") + (description "This Python library is based upon the @code{xmlfile} module +from @code{lxml}. It aims to provide a low memory, compatible implementation +of @code{xmlfile}.") + (license license:expat))) + +(define-public python2-et-xmlfile + (package-with-python2 python-et-xmlfile)) + +(define-public python-openpyxl + (package + (name "python-openpyxl") + (version "2.6.2") + (source + (origin + ;; We use the upstream repository, as the tests are not included in the + ;; PyPI releases. + (method hg-fetch) + (uri (hg-reference + (url "https://bitbucket.org/openpyxl/openpyxl") + (changeset version))) + (file-name (string-append name "-" version "-checkout")) + (sha256 + (base32 "1qhij6kcvdxqjy4g6193nsv4q7fy8n4fwyd3c2z047idlm6s3j4w")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest")))))) + (native-inputs + ;; For the test suite. + `(("python-lxml" ,python-lxml) + ("python-pillow" ,python-pillow) + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-et-xmlfile" ,python-et-xmlfile) + ("python-jdcal" ,python-jdcal))) + (home-page "https://openpyxl.readthedocs.io") + (synopsis "Python library to read/write Excel 2010 XLSX/XLSM files") + (description "This Python library allows reading and writing to the Excel XLSX, XLSM, +XLTX and XLTM file formats that are defined by the Office Open XML (OOXML) +standard.") + (license license:expat))) + +(define-public python-eventlet + (package + (name "python-eventlet") + (version "0.25.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "eventlet" version)) + (sha256 + (base32 + "1hgz8jq19wlz8vwqj900ry8cjv578nz4scc91mlc8944yid6573c")))) + (build-system python-build-system) + (propagated-inputs + `(("python-greenlet" ,python-greenlet))) + (arguments + ;; TODO: Requires unpackaged 'enum-compat'. + '(#:tests? #f)) + (home-page "https://eventlet.net") + (synopsis "Concurrent networking library for Python") + (description + "Eventlet is a concurrent networking library for Python that +allows you to change how you run your code, not how you write it. +It uses @code{epoll} or @code{libevent} for highly scalable non-blocking I/O. +Coroutines ensure that the developer uses a blocking style of programming +that is similar to threading, but provide the benefits of non-blocking I/O. +The event dispatch is implicit, which means you can easily use @code{Eventlet} +from the Python interpreter, or as a small part of a larger application.") + (license license:expat))) + +(define-public python2-eventlet + (let ((base (package-with-python2 + (strip-python2-variant python-eventlet)))) + (package (inherit base) + (propagated-inputs + `(("python2-enum34" ,python2-enum34) + ,@(package-propagated-inputs base)))))) + +(define-public python-six + (package + (name "python-six") + (version "1.14.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "six" version)) + (sha256 + (base32 + "02lw67hprv57hyg3cfy02y3ixjk3nzwc0dx3c4ynlvkfwkfdnsr3")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "py.test" "-v")))))) + (native-inputs + `(("python-pytest" ,python-pytest-bootstrap))) + (home-page "https://pypi.org/project/six/") + (synopsis "Python 2 and 3 compatibility utilities") + (description + "Six is a Python 2 and 3 compatibility library. It provides utility +functions for smoothing over the differences between the Python versions with +the goal of writing Python code that is compatible on both Python versions. +Six supports every Python version since 2.5. It is contained in only one +Python file, so it can be easily copied into your project.") + (license license:x11))) + +(define-public python2-six + (package-with-python2 python-six)) + +(define-public python-six-bootstrap + (package + (inherit python-six) + (name "python-six-bootstrap") + (native-inputs `()) + (arguments `(#:tests? #f)))) + +(define-public python2-six-bootstrap + (package-with-python2 python-six-bootstrap)) + +(define-public python-schedule + (package + (name "python-schedule") + (version "0.4.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "schedule" version)) + (sha256 + (base32 + "0vplyjcbfrq50sphlwya749z8p2pcyi2nycw3518i0qpd9a6189i")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-mock" ,python-mock))) + (home-page "https://github.com/dbader/schedule") + (synopsis "Schedule periodic function calls in Python") + (description + "Schedule is an in-process scheduler for periodic jobs that uses the +builder pattern for configuration. Schedule lets you run Python functions (or +any other callable) periodically at pre-determined intervals using a simple, +human-friendly syntax.") + (license license:expat))) + +(define-public python2-schedule + (package-with-python2 python-schedule)) + +(define-public python-mechanize + (package + (name "python-mechanize") + (version "0.4.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "mechanize" version)) + (sha256 + (base32 + "1z9kqcwb8gfq2l6i42z624kxpd8692a0c8gw2x5bbm7n848w2mb3")))) + (build-system python-build-system) + (propagated-inputs + `(("python-html5lib" ,python-html5lib))) + (home-page "https://github.com/python-mechanize/mechanize") + (synopsis + "Stateful programmatic web browsing in Python") + (description + "Mechanize implements stateful programmatic web browsing in Python, +after Andy Lester’s Perl module WWW::Mechanize.") + (license license:bsd-3))) + +(define-public python2-mechanize + (package-with-python2 python-mechanize)) + +(define-public python-simplejson + (package + (name "python-simplejson") + (version "3.17.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "simplejson" version)) + (sha256 + (base32 + "108yf3252fy4ndqab7h46raksxfhcn113bzy2yd8369vidrjnjrb")))) + (build-system python-build-system) + (home-page "http://simplejson.readthedocs.org/en/latest/") + (synopsis + "Json library for Python") + (description + "JSON (JavaScript Object Notation) is a subset of JavaScript +syntax (ECMA-262 3rd edition) used as a lightweight data interchange +format. + +Simplejson exposes an API familiar to users of the standard library marshal +and pickle modules. It is the externally maintained version of the json +library contained in Python 2.6, but maintains compatibility with Python 2.5 +and (currently) has significant performance advantages, even without using +the optional C extension for speedups. Simplejson is also supported on +Python 3.3+.") + (license license:x11))) + +(define-public python2-simplejson + (package-with-python2 python-simplejson)) + + +(define-public python-pyicu + (package + (name "python-pyicu") + (version "2.4.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "PyICU" version)) + (sha256 + (base32 + "075bw66b3w0nw6mc5k32fwmrhyrmq3d7da3q2mw212qfmm0pgjn0")))) + (build-system python-build-system) + (inputs + `(("icu4c" ,icu4c))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-six" ,python-six))) + (home-page "https://github.com/ovalhub/pyicu") + (synopsis "Python extension wrapping the ICU C++ API") + (description + "PyICU is a python extension wrapping the ICU C++ API.") + (license license:x11))) + +(define-public python2-pyicu + (package-with-python2 python-pyicu)) + +(define-public python-dogtail + (package + (name "python-dogtail") + (version "0.9.11") + (source (origin + (method url-fetch) + (uri + (string-append + "https://gitlab.com/dogtail/dogtail/-/raw/released/" + "dogtail-" version ".tar.gz")) + (sha256 + (base32 + "0sr38z7b2n12bvfd4xw4b5dnnhkn5zl3h0ymmnnzavcihfqia6l0")))) + (build-system python-build-system) + (arguments + `(#:tests? #f ; TODO Launching dbus for the tests + ; fails + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (system "Xvfb :1 &") + (setenv "DISPLAY" ":1") + (invoke "dbus-run-session" "--" "nosetests" "-v" "tests/")) + #t))))) + (propagated-inputs + `(("python-pygobject" ,python-pygobject) + ("python-pycairo" ,python-pycairo) + ("python-pyatspi" ,python-pyatspi))) + (native-inputs + `(("python-nose" ,python-nose) + ("gtk+" ,gtk+) + ("xvfb" ,xorg-server) + ("dbus" ,dbus) + ("gsettings-desktop-schemas" ,gsettings-desktop-schemas) + ("gobject-introspection" ,gobject-introspection))) + (home-page "https://gitlab.com/dogtail/dogtail/") + (synopsis "GUI test tool and automation framework written in Python") + (description + "Dogtail is a GUI test tool and automation framework written in Python. +It uses Accessibility (a11y) technologies to communicate with desktop +applications. dogtail scripts are written in Python and executed like any +other Python program.") + (license license:gpl2+))) + +(define-public python2-dogtail + (package-with-python2 python-dogtail)) + +(define-public python-empy + (package + (name "python-empy") + (version "3.3.3") + (source (origin + (method url-fetch) + (uri (string-append "http://www.alcyone.com/software/empy/empy-" + version ".tar.gz")) + (sha256 + (base32 + "1mxfy5mgp473ga1pgz2nvm8ds6z4g3hdky8523z6jzvcs9ny6hcq")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ; python2 only + (home-page "http://www.alcyone.com/software/empy/") + (synopsis "Templating system for Python") + (description + "EmPy is a system for embedding Python expressions and statements in +template text; it takes an EmPy source file, processes it, and produces +output. This is accomplished via expansions, which are special signals to the +EmPy system and are set off by a special prefix (by default the at sign, @@). +EmPy can expand arbitrary Python expressions and statements in this way, as +well as a variety of special forms. Textual data not explicitly delimited in +this way is sent unaffected to the output, allowing Python to be used in +effect as a markup language. Also supported are callbacks via hooks, +recording and playback via diversions, and dynamic, chainable filters. The +system is highly configurable via command line options and embedded +commands.") + (license license:lgpl2.1+))) + +(define-public python2-empy + (let ((base (package-with-python2 (strip-python2-variant python-empy)))) + (package + (inherit base) + (arguments `(,@(package-arguments base) + #:tests? #t))))) + +(define-public python2-element-tree + (package + (name "python2-element-tree") + (version "1.2.6") + (source (origin + (method url-fetch) + (uri (string-append + "http://effbot.org/media/downloads/elementtree-" + version "-20050316.tar.gz")) + (sha256 + (base32 + "016bphqnlg0l4vslahhw4r0aanw95bpypy65r1i1acyb2wj5z7dj")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 ; seems to be part of Python 3 + #:tests? #f)) ; no 'test' sub-command + (synopsis "Toolkit for XML processing in Python") + (description + "ElementTree is a Python library supporting lightweight XML processing.") + (home-page "https://effbot.org/zone/element-index.htm") + (license (license:x11-style + "http://docs.python.org/2/license.html" + "Like \"CWI LICENSE AGREEMENT FOR PYTHON 0.9.0 THROUGH 1.2\".")))) + +(define-public python2-pybugz + (package + (name "python2-pybugz") + (version "0.6.11") + (source (origin + (method url-fetch) + (uri (string-append + "http://bits.liquidx.net/projects/pybugz/pybugz-" + version ".tar.gz")) + (sha256 + (base32 + "17ni00p08gp5lkxlrrcnvi3x09fmajnlbz4da03qcgl9q21ym4jd")) + (patches (search-patches "pybugz-stty.patch" + "pybugz-encode-error.patch")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 ; SyntaxError with Python 3 + #:tests? #f)) ; no 'test' sub-command + (propagated-inputs + `(("element-tree" ,python2-element-tree))) + (synopsis "Python and command-line interface to Bugzilla") + (description + "PyBugz is a Python library and command-line tool to query the Bugzilla +bug tracking system. It is meant as an aid to speed up interaction with the +bug tracker.") + (home-page "http://www.liquidx.net/pybugz/") + (license license:gpl2))) + +(define-public python2-enum + (package + (name "python2-enum") + (version "0.4.6") + (source (origin + (method url-fetch) + (uri (pypi-uri "enum" version)) + (sha256 + (base32 + "13lk3yrwj42vl30kw3c194f739nrfrdg64s6i0v2p636n4k8brsl")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (home-page "https://pypi.org/project/enum/") + (synopsis "Robust enumerated type support in Python") + (description + "This provides a module for robust enumerations in Python. It has +been superseded by the Python standard library and is provided only for +compatibility.") + ;; Choice of either license. + (license (list license:gpl3+ license:psfl)))) + +(define-public python-enum34 + (package + (name "python-enum34") + (version "1.1.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "enum34" version)) + (sha256 + (base32 + "1cgm5ng2gcfrkrm3hc22brl6chdmv67b9zvva9sfs7gn7dwc9n4a")))) + (build-system python-build-system) + (home-page "https://pypi.org/project/enum34/") + (synopsis "Backported Python 3.4 Enum") + (description + "Enum34 is the new Python stdlib enum module available in Python 3.4 +backported for previous versions of Python from 2.4 to 3.3.") + (license license:bsd-3))) + +(define-public python2-enum34 + (package-with-python2 python-enum34)) + +(define-public python-parse-type + (package + (name "python-parse-type") + (version "0.4.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "parse_type" version)) + (sha256 + (base32 + "0g3b6gsdwnm8dpkh2vn34q6dzxm9gl908ggyzcv31n9xbp3vv5pm")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six) + ("python-parse" ,python-parse))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner))) + (home-page "https://github.com/jenisys/parse_type") + (synopsis "Extended parse module") + (description + "Parse_type extends the python parse module.") + (properties + `((python2-variant . ,(delay python2-parse-type)))) + (license license:bsd-3))) + +(define-public python2-parse-type + (let ((base (package-with-python2 + (strip-python2-variant python-parse-type)))) + (package (inherit base) + (propagated-inputs + `(("python2-enum34" ,python2-enum34) + ,@(package-propagated-inputs base)))))) + +(define-public python-parse + (package + (name "python-parse") + (version "1.8.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "parse" version)) + (sha256 + (base32 + "0f8997xr8nq2nq35iiviq8ningd1zvy59fg503xfpbi2dwhgdkf3")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (invoke "python" "test_parse.py")))))) + (home-page "https://github.com/r1chardj0n3s/parse") + (synopsis "Parse strings") + (description + "Parse strings using a specification based on the Python @code{format()} +syntax.") + (license license:x11))) + +(define-public python-polib + (package + (name "python-polib") + (version "1.0.8") + (source (origin + (method url-fetch) + (uri (pypi-uri "polib" version)) + (sha256 + (base32 + "1pq2hbm3m2q0cjdszk8mc4qa1vl3wcblh5nfyirlfnzb2pcy7zss")))) + (build-system python-build-system) + (home-page "https://bitbucket.org/izi/polib/wiki/Home") + (synopsis "Manipulate, create and modify gettext files") + (description "Polib can manipulate any gettext format (po, pot and mo) +files. It can be used to create po files from scratch or to modify +existing ones.") + (license license:expat))) + +(define-public python2-polib + (let ((base (package-with-python2 (strip-python2-variant python-polib)))) + (package + (inherit base) + (arguments `(,@(package-arguments base) + ;; Tests don't work with python2. + #:tests? #f))))) + +(define-public python-poyo + (package + (name "python-poyo") + (version "0.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "poyo" version)) + (sha256 + (base32 + "1pflivs6j22frz0v3dqxnvc8yb8fb52g11lqr88z0i8cg2m5csg2")))) + (build-system python-build-system) + (home-page "https://github.com/hackebrot/poyo") + (synopsis "Lightweight YAML Parser for Python") + (description + "This package provides a lightweight YAML Parser for Python. It supports +only a chosen subset of the YAML format that is required to parse cookiecutter +user configuration files. It does not have support for serializing into YAML +and is not compatible with JSON.") + (license license:expat))) + +(define-public scons + (package + (name "scons") + (version "3.0.4") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/SCons/scons") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1xy8jrwz87y589ihcld4hv7wn122sjbz914xn8h50ww77wbhk8hn")))) + (build-system python-build-system) + (arguments + `(#:use-setuptools? #f ; still relies on distutils + #:tests? #f ; no 'python setup.py test' command + #:phases + (modify-phases %standard-phases + (add-before 'build 'bootstrap + (lambda _ + (substitute* "src/engine/SCons/compat/__init__.py" + (("sys.modules\\[new\\] = imp.load_module\\(old, \\*imp.find_module\\(old\\)\\)") + "sys.modules[new] = __import__(old)")) + (substitute* "src/engine/SCons/Platform/__init__.py" + (("mod = imp.load_module\\(full_name, file, path, desc\\)") + "mod = __import__(full_name)")) + (invoke "python" "bootstrap.py" "build/scons" "DEVELOPER=guix") + (chdir "build/scons") + #t))))) + (home-page "https://scons.org/") + (synopsis "Software construction tool written in Python") + (description + "SCons is a software construction tool. Think of SCons as an improved, +cross-platform substitute for the classic Make utility with integrated +functionality similar to autoconf/automake and compiler caches such as ccache. +In short, SCons is an easier, more reliable and faster way to build +software.") + (license license:x11))) + +(define-public scons-python2 + (package + (inherit (package-with-python2 scons)) + (name "scons-python2"))) + +(define-public python-extras + (package + (name "python-extras") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "extras" version)) + (sha256 + (base32 + "0khvm08rcwm62wc47j8niyl6h13f8w51c8669ifivjdr23g3cbhk")))) + (build-system python-build-system) + (arguments + ;; FIXME: Circular dependency on testtools. + '(#:tests? #f)) + (home-page "https://github.com/testing-cabal/extras") + (synopsis "Useful extensions to the Python standard library") + (description + "Extras is a set of extensions to the Python standard library.") + (license license:expat))) + +(define-public python2-extras + (package-with-python2 python-extras)) + +(define-public python-mimeparse + (package + (name "python-mimeparse") + (version "1.6.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-mimeparse" version)) + (sha256 + (base32 + "0y2g6cl660bpz11srgqyvvm8gmywpgyx8g0xfvbiyr0af0yv1r3n")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "./mimeparse_test.py")))))) + (home-page + "https://github.com/dbtsai/python-mimeparse") + (synopsis "Python library for parsing MIME types") + (description + "Mimeparse provides basic functions for parsing MIME type names and +matching them against a list of media-ranges.") + (license license:expat))) + +(define-public python2-mimeparse + (package-with-python2 python-mimeparse)) + +(define-public python-miniboa + (package + (name "python-miniboa") + (version "1.0.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "miniboa" version)) + (sha256 + (base32 + "09jh3pn4rh7kh7jayanf8jzy6gp03791b5a193w6148cf3i6k9m3")))) + (build-system python-build-system) + (home-page "https://github.com/shmup/miniboa") + (synopsis "Simple, single-threaded Telnet server") + (description + "Miniboa is a simple, asynchronous, single-threaded, poll-based Telnet +server.") + (license license:asl2.0))) + +(define-public python2-miniboa + (package-with-python2 python-miniboa)) + +(define-public python-pafy + (package + (name "python-pafy") + (version "0.5.3.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pafy" version)) + (sha256 + (base32 + "1a7dxi95m1043rxx1r5x3ngb66nwlq6aqcasyqqjzmmmjps4zrim")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ; Currently pafy can not find itself in the tests + (propagated-inputs + ;; Youtube-dl is a python package which is imported in the file + ;; "backend_youtube_dl.py", therefore it needs to be propagated. + `(("youtube-dl" ,youtube-dl))) + (home-page "https://np1.github.io/pafy/") + (synopsis "Retrieve YouTube content and metadata") + (description + "@code{pafy} is a python library to retrieve YouTube content and metadata.") + (license license:lgpl3+))) + +(define-public python2-funcsigs + (package + (name "python2-funcsigs") + (version "1.0.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "funcsigs" version)) + (sha256 + (base32 + "0l4g5818ffyfmfs1a924811azhjj8ax9xd1cffr1mzd3ycn0zfx7")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (native-inputs + `(("python2-unittest2" ,python2-unittest2))) + (home-page "http://funcsigs.readthedocs.org") + (synopsis "Python function signatures from PEP362") + (description + "Backport of @code{funcsigs} which was introduced in Python 3.3.") + (license license:asl2.0))) + +(define-public python2-funcsigs-bootstrap + (package + (inherit python2-funcsigs) + (name "python2-funcsigs-bootstrap") + (native-inputs `()) + (arguments + `(#:tests? #f + ,@(package-arguments python2-funcsigs))))) + +(define-public python-py + (package + (name "python-py") + (version "1.8.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "py" version)) + (sha256 + (base32 + "1ajjazg3913n0sp3vjyva9c2qh5anx8ziryng935f89604a0h9sy")))) + (build-system python-build-system) + (arguments + ;; FIXME: "ImportError: 'test' module incorrectly imported from + ;; '/gnu/store/...-python-pytest-mimimal-3.0.5/lib/python3.5/site-packages'. + ;; Expected '/tmp/guix-build-python-py-1.4.31.drv-0/py-1.4.31/py'. + ;; Is this module globally installed?" + '(#:tests? #f)) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm))) + (home-page "https://github.com/pytest-dev/py") + (synopsis "Python library for parsing, I/O, instrospection, and logging") + (description + "Py is a Python library for file name parsing, .ini file parsing, I/O, +code introspection, and logging.") + (license license:expat))) + +(define-public python2-py + (package-with-python2 python-py)) + +;; Recent versions of python-fixtures and python-testrepository need +;; python-pbr for packaging, which itself needs these two packages for +;; testing. +;; To fix this circular dependency, we use a build of python-pbr, based on the +;; same source, just without any test dependencies and with tests disabled. +;; python-pbr-minmal is then used to package python-fixtures and +;; python-testrepository. +;; Strictly speaking we currently could remove the test-requirements from the +;; normal python-pbr package (and save this package) since test are disabled +;; there anyway. But this may change in future. +(define-public python-pbr-minimal + (package + (name "python-pbr-minimal") + (version "3.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pbr" version)) + (sha256 + (base32 + "14fs5acnalnb3h62s7q7av239j541fk0n0z0lawh4h09b1s93s6p")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) + (home-page "https://docs.openstack.org/pbr/latest/") + (synopsis "Minimal build of python-pbr used for bootstrapping") + (description + "Used only for bootstrapping python2-pbr, you should not need this.") + (license license:asl2.0))) + +(define-public python2-pbr-minimal + (package-with-python2 python-pbr-minimal)) + +(define-public python-pbr + (package + (inherit python-pbr-minimal) + (name "python-pbr") + (arguments + `(#:tests? #f)) ;; Most tests seem to use the Internet. + (propagated-inputs + `(("git" ,git))) ;; pbr actually uses the "git" binary. + (native-inputs + `(("python-fixtures" ,python-fixtures-bootstrap) + ;; discover, coverage, hacking, subunit + ("python-mock" ,python-mock) + ("python-six" ,python-six) + ("python-sphinx" ,python-sphinx) + ("python-testrepository" ,python-testrepository-bootstrap) + ("python-testresources" ,python-testresources-bootstrap) + ("python-testscenarios" ,python-testscenarios-bootstrap) + ("python-testtools" ,python-testtools-bootstrap) + ("python-virtualenv" ,python-virtualenv))) + (synopsis "Enhance the default behavior of Python’s setuptools") + (description + "Python Build Reasonableness (PBR) is a library that injects some useful +and sensible default behaviors into your setuptools run. It will set +versions, process requirements files and generate AUTHORS and ChangeLog file +from git information. +"))) + +(define-public python2-pbr + (package-with-python2 python-pbr)) + +(define-public python-pyrsistent + (package + (name "python-pyrsistent") + (version "0.16.0") + (home-page "https://github.com/tobgu/pyrsistent") + (source (origin + (method url-fetch) + (uri (pypi-uri "pyrsistent" version)) + (sha256 + (base32 + "1lrsjgblnapfimd0alsi1as5nz2lfqv97131l7d6anbjzq2rjri8")))) + (build-system python-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + ;; The package works fine with newer Pytest and Hypothesis, but + ;; has pinned older versions to stay compatible with Python 2. + (add-before 'check 'loosen-pytest-requirement + (lambda _ + (substitute* "setup.py" + (("pytest<5") "pytest") + (("hypothesis<5") "hypothesis")) + #t))))) + (native-inputs + `(("python-hypothesis" ,python-hypothesis) + ("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner))) + (propagated-inputs + `(("python-six" ,python-six))) + (synopsis "Persistent data structures for Python") + (description + "Pyrsistent is a number of persistent collections (by some referred to as +functional data structures). Persistent in the sense that they are immutable. + +All methods on a data structure that would normally mutate it instead return a +new copy of the structure containing the requested updates. The original +structure is left untouched.") + (license license:expat))) + +(define-public python2-pyrsistent + (package-with-python2 python-pyrsistent)) + +(define-public python-exif-read + (package + (name "python-exif-read") + (version "2.1.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "ExifRead" version)) + (sha256 + (base32 + "1b90jf6m9vxh9nanhpyvqdq7hmfx5iggw1l8kq10jrs6xgr49qkr")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) ; no tests + (home-page "https://github.com/ianare/exif-py") + (synopsis "Python library to extract EXIF data from image files") + (description + "ExifRead is a Python library to extract EXIF data from tiff and jpeg +files.") + (license license:bsd-3))) + +(define-public python2-exif-read + (package-with-python2 python-exif-read)) + +(define-public python-pyld + (package + (name "python-pyld") + (version "1.0.5") + (source (origin + (method url-fetch) + (uri (pypi-uri "PyLD" version)) + (sha256 + (base32 + "1ywbdbsrkg533qh8xn9ifjh2mvam6v5msrjyqq73jfpvcp89qvff")))) + (build-system python-build-system) + (home-page "https://github.com/digitalbazaar/pyld") + (synopsis "Python implementation of the JSON-LD specification") + (description + "PyLD is an implementation of the JSON-LD specification.") + (license license:bsd-3))) + +(define-public python2-pyld + (package-with-python2 python-pyld)) + +(define-public python-cli-helpers + (package + (name "python-cli-helpers") + (version "2.0.1") + (source + (origin + ;; There's no source tarball on PyPI. + (method git-fetch) + (uri (git-reference + (url "https://github.com/dbcli/cli_helpers") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1bg2iw9l5dip0kbs00hajdk2v18wvhssbnq8hdf71278qf0wks5l")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-wcwidth" ,python-wcwidth) + ("python-configobj" ,python-configobj) + ("python-tabulate" ,python-tabulate) + ("python-terminaltables" ,python-terminaltables))) + (home-page "https://github.com/dbcli/cli_helpers") + (synopsis "Helpers for building command-line apps") + (description + "CLI Helpers is a Python package that makes it easy to perform common +tasks when building command-line apps. It's a helper library for command-line +interfaces.") + (license license:bsd-3))) + +(define-public python-click + (package + (name "python-click") + (version "7.1.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "click" version)) + (sha256 + (base32 + "06kbzd6sjfkqan3miwj9wqyddfxc2b6hi7p5s4dvqjb3gif2bdfj")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-paths + (lambda* (#:key inputs #:allow-other-keys) + (let ((glibc (assoc-ref inputs ,(if (%current-target-system) + "cross-libc" "libc")))) + (substitute* "src/click/_unicodefun.py" + (("'locale'") + (string-append "'" glibc "/bin/locale'")))) + #t)) + (replace 'check + (lambda _ + (setenv "PYTHONPATH" (string-append "./src:" (getenv "PYTHONPATH"))) + (invoke "python" "-m" "pytest")))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://palletsprojects.com/p/click/") + (synopsis "Command line library for Python") + (description + "Click is a Python package for creating command line interfaces in a +composable way with as little code as necessary. Its name stands for +\"Command Line Interface Creation Kit\". It's highly configurable but comes +with sensible defaults out of the box.") + (license license:bsd-3))) + +(define-public python2-click + (package-with-python2 python-click)) + +(define-public python-click-5 + (package (inherit python-click) + (name "python-click") + (version "5.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "click" version)) + (sha256 + (base32 "0njsm0wn31l21bi118g5825ma5sa3rwn7v2x4wjd7yiiahkri337")))) + (arguments `()))) + +(define-public python-wheel + (package + (name "python-wheel") + (version "0.33.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "wheel" version)) + (sha256 + (base32 + "0ii6f34rvpjg3nmw4bc2h7fhdsy38y1h93hghncfs5akfrldmj8h")))) + (build-system python-build-system) + (arguments + ;; FIXME: The test suite runs "python setup.py bdist_wheel", which in turn + ;; fails to find the newly-built bdist_wheel library, even though it is + ;; available on PYTHONPATH. What search path is consulted by setup.py? + '(#:tests? #f)) + (home-page "https://bitbucket.org/pypa/wheel/") + (synopsis "Format for built Python packages") + (description + "A wheel is a ZIP-format archive with a specially formatted filename and +the @code{.whl} extension. It is designed to contain all the files for a PEP +376 compatible install in a way that is very close to the on-disk format. Many +packages will be properly installed with only the @code{Unpack} step and the +unpacked archive preserves enough information to @code{Spread} (copy data and +scripts to their final locations) at any later time. Wheel files can be +installed with a newer @code{pip} or with wheel's own command line utility.") + (license license:expat))) + +(define-public python2-wheel + (package-with-python2 python-wheel)) + +(define-public python-vcversioner + (package + (name "python-vcversioner") + (version "2.16.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "vcversioner" version)) + (sha256 + (base32 + "16z10sm78jd7ca3jbkgc3q5i8a8q7y1h21q1li21yy3rlhbhrrns")))) + (build-system python-build-system) + (synopsis "Python library for version number discovery") + (description "Vcversioner is a Python library that inspects tagging +information in a variety of version control systems in order to discover +version numbers.") + (home-page "https://github.com/habnabit/vcversioner") + (license license:isc))) + +(define-public python2-vcversioner + (package-with-python2 python-vcversioner)) + +(define-public python-jdcal + (package + (name "python-jdcal") + (version "1.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jdcal" version)) + (sha256 + (base32 + "1ja6j2xq97bsl6rv09mhdx7n0xnrsfx0mj5xqza0mxghqmkm02pa")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest")))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/phn/jdcal") + (synopsis "Functions to convert between Julian dates Gregorian dates") + (description "This Python library provides functions for converting +between Julian dates and Gregorian dates.") + (license license:bsd-2))) + +(define-public python2-jdcal + (package-with-python2 python-jdcal)) + +(define-public python-jsondiff + (package + (name "python-jsondiff") + (version "1.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jsondiff" version)) + (sha256 + (base32 + "00v3689175aqzdscrxpffm712ylp8jvcpqdg51ca22ni6721p51l")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose) + ("python-nose-random" ,python-nose-random))) + (home-page + "https://github.com/fzumstein/jsondiff") + (synopsis "Compare JSON and JSON-like structures in Python") + (description "@code{jsondiff} is a Python library which lets you +compare, diff, and patch JSON and JSON-like structures in Python.") + (license license:expat))) + +(define-public python-jsonschema + (package + (name "python-jsonschema") + (version "3.2.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "jsonschema" version)) + (sha256 + (base32 + "0ykr61yiiizgvm3bzipa3l73rvj49wmrybbfwhvpgk3pscl5pa68")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (setenv "PYTHONPATH" (string-append ".:" (getenv "PYTHONPATH"))) + (invoke "trial" "jsonschema")))))) + (native-inputs + `(("python-setuptools_scm" ,python-setuptools-scm) + ("python-twisted" ,python-twisted))) + (propagated-inputs + `(("python-attrs" ,python-attrs) + ("python-importlib-metadata" ,python-importlib-metadata) ;; python < 3.8 + ("python-pyrsistent" ,python-pyrsistent) + ("python-six" ,python-six))) + (home-page "https://github.com/Julian/jsonschema") + (synopsis "Implementation of JSON Schema for Python") + (description + "Jsonschema is an implementation of JSON Schema for Python.") + (license license:expat) + (properties `((python2-variant . ,(delay python2-jsonschema)))))) + +(define-public python2-jsonschema + (let ((jsonschema (package-with-python2 + (strip-python2-variant python-jsonschema)))) + (package (inherit jsonschema) + (propagated-inputs + `(("python2-functools32" ,python2-functools32) + ,@(package-propagated-inputs jsonschema)))))) + +(define-public python-schema + (package + (name "python-schema") + (version "0.6.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "schema" version)) + (sha256 + (base32 + "1lw28j9w9vxyigg7vkfkvi6ic9lgjkdnfvnxdr7pklslqvzmk2vm")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/keleshev/schema") + (synopsis "Simple data validation library") + (description + "@code{python-schema} is a library for validating Python data +structures, such as those obtained from config-files, forms, external +services or command-line parsing, converted from JSON/YAML (or +something else) to Python data-types.") + (license license:psfl))) + +(define-public python2-schema + (package-with-python2 python-schema)) + +(define-public python-schema-0.5 + (package (inherit python-schema) + (version "0.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "schema" version)) + (sha256 + (base32 + "10zqvpaky51kgb8nd42bk7jwl8cn2zvayxjpdc1wwmpybj92x67s")))))) + +(define-public python2-schema-0.5 + (package-with-python2 python-schema-0.5)) + +(define-public python-kitchen + (package + (name "python-kitchen") + (version "1.2.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "kitchen" version)) + (sha256 + (base32 + "1zakh6l0yjvwic9p0nkvmbidpnkygkxbigh2skmb5gccyrhbp7xg")))) + (build-system python-build-system) + (propagated-inputs + `(("python-chardet" ,python-chardet))) + (home-page "https://github.com/fedora-infra/kitchen") + (synopsis "Python API for snippets") + (description "@code{kitchen} module provides a python API for all sorts of +little useful snippets of code that everybody ends up writing for their projects +but never seem big enough to build an independent release. Use kitchen and stop +cutting and pasting that code over and over.") + (license (list license:lgpl2.1+ + ;; subprocess.py, test_subprocess.py, + ;; kitchen/pycompat25/defaultdict.py: + license:psfl)))) + +(define-public python2-kitchen + (package-with-python2 python-kitchen)) + +(define-public python-unidecode + (package + (name "python-unidecode") + (version "1.1.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "Unidecode" version)) + (sha256 + (base32 + "1s6cp2lv4m0f00hjckjz8p6m7d3n3v16jvg353llf5ia1iqsnsib")))) + (build-system python-build-system) + (home-page "https://pypi.org/project/Unidecode/") + (synopsis "ASCII transliterations of Unicode text") + (description + "Unidecode provides ASCII transliterations of Unicode text. Unidecode is +useful when integrating with legacy code that doesn't support Unicode, or for +ease of entry of non-Roman names on a US keyboard, or when constructing ASCII +machine identifiers from human-readable Unicode strings that should still be +somewhat intelligible.") + (license license:gpl2+))) + +(define-public python2-unidecode + (package-with-python2 python-unidecode)) + +(define-public python-text-unidecode + (package + (name "python-text-unidecode") + (version "1.3") + (source (origin + (method url-fetch) + (uri (pypi-uri "text-unidecode" version)) + (sha256 + (base32 + "14xb99fdv52j21dsljgsbmbaqv10ps4b453p229r29sdn4xn1mms")))) + (build-system python-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (setenv "PYTHONPATH" + (string-append "./build/lib:" + (getenv "PYTHONPATH"))) + (invoke "pytest" "-vv")))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/kmike/text-unidecode/") + (synopsis "Decode Unicode data") + (description + "@code{text-unidecode} is a basic Python port of the @code{Text::Unidecode} +Perl library. It can create ASCII representations of Unicode data. In general +users should prefer the @code{python-unidecode} package which offers better +memory usage and transliteration quality.") + ;; The user can choose either license. + (license (list license:clarified-artistic license:gpl2+)))) + +(define-public python2-text-unidecode + (package-with-python2 python-text-unidecode)) + +(define-public python-pyjwt + (package + (name "python-pyjwt") + (version "1.7.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "PyJWT" version)) + (sha256 + (base32 + "15hflax5qkw1v6nssk1r0wkj83jgghskcmn875m3wgvpzdvajncd")) + (modules '((guix build utils))) + (snippet + '(begin + (for-each delete-file-recursively + (find-files "." "\\.pyc$")) + #t)))) + (build-system python-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; Mimic upstream commit 3a20892442b34c7 to get + ;; rid of dependency on pytest-runner < 5.0. + ;; Remove substitution for PyJWT > 1.7.1. + (substitute* "setup.py" + ((".*pytest-runner.*") + "")) + (invoke "pytest" "-vv")))))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov))) + (home-page "https://github.com/progrium/pyjwt") + (synopsis "JSON Web Token implementation in Python") + (description + "PyJWT is a JSON Web Token implementation written in Python.") + (license license:expat))) + +(define-public python2-pyjwt + (package-with-python2 python-pyjwt)) + +(define-public python-pykka + (package + (name "python-pykka") + (version "1.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Pykka" version)) + (sha256 + (base32 + "049w3r0mdnnw7xv19jiq7rvls9k7xs73x05b4qs5d6z4vvmgyiz8")))) + (build-system python-build-system) + (native-inputs + `(("python-mock" ,python-mock) + ("python-nose" ,python-nose) + ("python-gevent" ,python-gevent) + ("python-eventlet" ,python-eventlet))) + (home-page "https://www.pykka.org/") + (synopsis "Pykka is a Python implementation of the actor model") + (description + "Pykka is a Python implementation of the actor model. +The actor model introduces some simple rules to control the sharing +of state and cooperation between execution units, which makes it +easier to build concurrent applications.") + (license license:asl2.0))) + +(define-public python2-pykka + (package-with-python2 python-pykka)) + +(define-public python-pymsgbox + (package + (name "python-pymsgbox") + (version "1.0.6") + (source + (origin + (method git-fetch) + (uri (git-reference + ;; LICENSE.txt is not present on pypi + (url "https://github.com/asweigart/PyMsgBox") + (commit "55926b55f46caa969c5ddb87990ebea2737bd66f"))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0zy7rjfpwlrd8b64j7jk2lb8m2npc21rnpwakpfvwgl4nxdy80rg")))) + (arguments + ;; Circular dependency to run tests: + ;; Tests need pyautogui, which depends on pymsgbox. + '(#:tests? #f)) + (build-system python-build-system) + (home-page "https://github.com/asweigart/PyMsgBox") + (synopsis "Python module for JavaScript-like message boxes") + (description + "PyMsgBox is a simple, cross-platform, pure Python module for +JavaScript-like message boxes. Types of dialog boxes include: +@enumerate +@item alert +@item confirm +@item prompt +@item password +@end enumerate +") + (license license:bsd-3))) + +(define-public python-pympler + (package + (name "python-pympler") + (home-page "https://pythonhosted.org/Pympler/") + (version "0.8") + (source (origin + (method url-fetch) + (uri (pypi-uri "Pympler" version)) + (sha256 + (base32 + "08mrpnb6cv2nvfncvr8a9a8bpwhnasa924anapnjvnaw5jcd4k7p")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (invoke "python" "setup.py" "test")))))) + (synopsis "Measure, monitor and analyze memory behavior") + (description + "Pympler is a development tool to measure, monitor and analyze +the memory behavior of Python objects in a running Python application. + +By pympling a Python application, detailed insight in the size and the +lifetime of Python objects can be obtained. Undesirable or unexpected +runtime behavior like memory bloat and other @samp{pymples} can easily +be identified. + +A web profiling frontend exposes process statistics, garbage +visualisation and class tracker statistics.") + (license license:asl2.0))) + +(define-public python2-pympler + (package-with-python2 python-pympler)) + +(define-public python-itsdangerous + (package + (name "python-itsdangerous") + (version "1.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "itsdangerous" version)) + (sha256 + (base32 + "068zpbksq5q2z4dckh2k1zbcq43ay74ylqn77rni797j0wyh66rj")))) + (build-system python-build-system) + (home-page "https://palletsprojects.com/p/itsdangerous/") + (synopsis "Python library for passing data to/from untrusted environments") + (description + "Itsdangerous provides various helpers to pass trusted data to untrusted +environments and back.") + (license license:bsd-3))) + +(define-public python2-itsdangerous + (package-with-python2 python-itsdangerous)) + +(define-public python-pyyaml + (package + (name "python-pyyaml") + (version "5.3.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "PyYAML" version)) + (sha256 + (base32 + "0pb4zvkfxfijkpgd1b86xjsqql97ssf1knbd1v53wkg1qm9cgsmq")))) + (build-system python-build-system) + (inputs + `(("libyaml" ,libyaml))) + (home-page "https://pyyaml.org") + (synopsis "YAML parser and emitter for Python") + (description + "PyYAML is a YAML parser and emitter for Python. PyYAML features a +complete YAML 1.1 parser, Unicode support, pickle support, capable extension +API, and sensible error messages. PyYAML supports standard YAML tags and +provides Python-specific tags that represent an arbitrary Python object.") + (license license:expat))) + +(define-public python2-pyyaml + (package-with-python2 python-pyyaml)) + +(define-public python-vine + (package + (name "python-vine") + (version "1.1.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "vine" version)) + (sha256 + (base32 + "0wkskb2hb494v9gixqnf4bl972p4ibcmxdykzpwjlfa5picns4aj")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-case" ,python-case))) + (home-page "https://github.com/celery/vine") + (synopsis "Promises for Python") + (description + "@code{vine} provides a special implementation of promises in that it can +be used both for \"promise of a value\" and lazy evaluation. The biggest +upside for this is that everything in a promise can also be a promise, +e.g. filters, callbacks and errbacks can all be promises.") + (license license:bsd-3))) + +(define-public python-virtualenv + (package + (name "python-virtualenv") + (version "20.0.10") + (source + (origin + (method url-fetch) + (uri (pypi-uri "virtualenv" version)) + (sha256 + (base32 + "0y6x41l3ja891993i4adylbbyly0r4m52n2d0a0y9y4h3lzyh4l5")))) + (build-system python-build-system) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest) + ;; NOTE: guix lint remarks that "python-setuptools should probably not + ;; be an input at all". However, removing the input makes the build error: + ;; File "setup.py", line 4, in + ;; raise RuntimeError("setuptools >= 41 required to build") + ("python-setuptools" ,python-setuptools) + ("python-setuptools-scm" ,python-setuptools-scm))) + (propagated-inputs + `(("python-appdirs" ,python-appdirs) + ("python-distlib" ,python-distlib) + ("python-filelock" ,python-filelock) + ("python-six" ,python-six) + ("python-importlib-metadata" ,python-importlib-metadata))) + (home-page "https://virtualenv.pypa.io/") + (synopsis "Virtual Python environment builder") + (description + "Virtualenv is a tool to create isolated Python environments.") + (properties `((python2-variant . ,(delay python2-virtualenv)))) + (license license:expat))) + +(define-public python2-virtualenv + (let ((base (package-with-python2 (strip-python2-variant python-virtualenv)))) + (package + (inherit base) + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + (add-after 'set-paths 'adjust-PYTHONPATH + (lambda* (#:key inputs #:allow-other-keys) + (let* ((python (assoc-ref inputs "python")) + (python-sitedir (string-append python "/lib/python2.7" + "/site-packages"))) + ;; XXX: 'python2' always comes first on PYTHONPATH + ;; and shadows the 'setuptools' input. Move python2 + ;; last: this should be fixed in python-build-system + ;; in a future rebuild cycle. + (setenv "PYTHONPATH" + (string-append (string-join (delete python-sitedir + (string-split + (getenv "PYTHONPATH") + #\:)) + ":") + ":" python-sitedir)) + (format #t "environment variable `PYTHONPATH' changed to `~a'~%" + (getenv "PYTHONPATH")) + #t)))))) + (propagated-inputs + `(("python-contextlib2" ,python2-contextlib2) + ,@(package-propagated-inputs base)))))) + +(define-public python-markupsafe + (package + (name "python-markupsafe") + (version "1.1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "MarkupSafe" version)) + (sha256 + (base32 + "0sqipg4fk7xbixqd8kq6rlkxj664d157bdwbh93farcphf92x1r9")))) + (build-system python-build-system) + (arguments + `(#:modules ((ice-9 ftw) + (srfi srfi-1) + (srfi srfi-26) + (guix build utils) + (guix build python-build-system)) + #:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (let ((cwd (getcwd)) + (libdir (find (cut string-prefix? "lib." <>) + (scandir "build")))) + (setenv "PYTHONPATH" + (string-append cwd "/build/" libdir ":" + (getenv "PYTHONPATH"))) + (invoke "pytest" "-vv"))))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/mitsuhiko/markupsafe") + (synopsis "XML/HTML/XHTML markup safe string implementation for Python") + (description + "Markupsafe provides an XML/HTML/XHTML markup safe string implementation +for Python.") + (license license:bsd-3))) + +(define-public python2-markupsafe + (package-with-python2 python-markupsafe)) + +(define-public python-jinja2 + (package + (name "python-jinja2") + (version "2.11.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Jinja2" version)) + (sha256 + (base32 + "1c1v3djnr0ymp5xpy1h3h60abcaqxdlm4wsqmls9rxby88av5al9")))) + (build-system python-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (if tests? + (begin + (setenv "PYTHONPATH" + (string-append "./build/lib:" + (getenv "PYTHONPATH"))) + (invoke "pytest" "-vv")) + (format #t "test suite not run~%")) + #t))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-markupsafe" ,python-markupsafe))) + (home-page "http://jinja.pocoo.org/") + (synopsis "Python template engine") + (description + "Jinja2 is a small but fast and easy to use stand-alone template engine +written in pure Python.") + (license license:bsd-3))) + +(define-public python2-jinja2 + (package-with-python2 python-jinja2)) + +(define-public python-jinja2-time + (package + (name "python-jinja2-time") + (version "0.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jinja2-time" version)) + (sha256 + (base32 + "0h0dr7cfpjnjj8bgl2vk9063a53649pn37wnlkd8hxjy656slkni")))) + (build-system python-build-system) + (propagated-inputs + `(("python-arrow" ,python-arrow) + ("python-jinja2" ,python-jinja2))) + (home-page + "https://github.com/hackebrot/jinja2-time") + (synopsis "Jinja2 Extension for Dates and Times") + (description + "This package provides an extension for the template engine Jinja2. It +adds a 'now' tag providing a convenient access to the arrow.now() API from +templates. A format string can be provided to control the output.") + (license license:expat))) + +(define-public python-pystache + (package + (name "python-pystache") + (version "0.5.4") + (source (origin + (method url-fetch) + (uri (pypi-uri "pystache" version)) + (sha256 + (base32 + "0nmqsfmiw4arjxqkmf9z66ml950pcdjk6aq4gin4sywmzdjw5fzp")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; FIXME: Python 3 tests are failing. + (home-page "http://defunkt.io/pystache/") + (synopsis "Python logic-less template engine") + (description + "Pystache is a Python implementation of the framework agnostic, +logic-free templating system Mustache.") + (license license:expat) + (properties `((python2-variant . ,(delay python2-pystache)))))) + +(define-public python2-pystache + (package (inherit (package-with-python2 + (strip-python2-variant python-pystache))) + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "python" "test_pystache.py")))))))) + +(define-public python-joblib + (package + (name "python-joblib") + (version "0.14.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "joblib" version)) + (sha256 + (base32 + "1j464w137w6s367gl697j1l63g52akydrxgv4czlck36ynjfwc06")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (invoke "pytest" "-v" "joblib")))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://joblib.readthedocs.io/") + (synopsis "Using Python functions as pipeline jobs") + (description + "Joblib is a set of tools to provide lightweight pipelining in Python. +In particular, joblib offers: transparent disk-caching of the output values +and lazy re-evaluation (memoize pattern), easy simple parallel computing +logging and tracing of the execution.") + (license license:bsd-3))) + +(define-public python2-joblib + (package-with-python2 python-joblib)) + +(define-public python-daemon + (package + (name "python-daemon") + (version "2.2.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-daemon" version)) + (sha256 + (base32 + "09fcjdjzk9ywmpnrj62iyxqgcygzdafsz41qlrk2dknzbagcmzmg")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'disable-tests + (lambda _ + ;; FIXME: Determine why test fails + (substitute* "test/test_daemon.py" + (("test_detaches_process_context") + "skip_test_detaches_process_context")) + #t))))) + (propagated-inputs + `(("python-lockfile" ,python-lockfile))) + (native-inputs + `(("python-unittest2" ,python-unittest2) + ("python-testtools" ,python-testtools) + ("python-testscenarios" ,python-testscenarios) + ("python-mock" ,python-mock) + ("python-docutils" ,python-docutils))) + (home-page "https://pagure.io/python-daemon/") + (synopsis "Python library for making a Unix daemon process") + (description "Python-daemon is a library that assists a Python program to +turn itself into a well-behaved Unix daemon process, as specified in PEP 3143. + +This library provides a @code{DaemonContext} class that manages the following +important tasks for becoming a daemon process: +@enumerate +@item Detach the process into its own process group. +@item Set process environment appropriate for running inside a chroot. +@item Renounce suid and sgid privileges. +@item Close all open file descriptors. +@item Change the working directory, uid, gid, and umask. +@item Set appropriate signal handlers. +@item Open new file descriptors for stdin, stdout, and stderr. +@item Manage a specified PID lock file. +@item Register cleanup functions for at-exit processing. +@end enumerate") + ;; Only setup.py is gpl3+, everything else is apache 2.0 licensed. + (license (list license:asl2.0 license:gpl3+)))) + +(define-public python-anytree + (package + (name "python-anytree") + (version "2.8.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "anytree" version)) + (sha256 + (base32 + "1aycpc387wqz7h9w2p53qxn43qsh3m6by6ak4kkc66x9aprr63rz")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six))) + (native-inputs + `(;; For tests. + ("graphviz" ,graphviz) ;for 'dot' + ("python-nose" ,python-nose))) + (home-page "https://github.com/c0fec0de/anytree") + (synopsis "Lightweight tree data library") + (description + "@code{anytree} is a simple, lightweight, and extensible tree data +structure for Python.") + (license license:asl2.0))) + +(define-public python-docutils + (package + (name "python-docutils") + (version "0.16") + (source + (origin + (method url-fetch) + (uri (pypi-uri "docutils" version)) + (sha256 + (base32 + "1z3qliszqca9m719q3qhdkh0ghh90g500avzdgi7pl77x5h3mpn2")))) + (build-system python-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (if tests? + (invoke "python" "test/alltests.py") + (format #t "test suite not run~%")) + #t))))) + (home-page "http://docutils.sourceforge.net/") + (synopsis "Python Documentation Utilities") + (description + "Docutils is a modular system for processing documentation into useful +formats, such as HTML, XML, and LaTeX. For input Docutils supports +reStructuredText.") + ;; Most of the source code is public domain, but some source files are + ;; licensed under the PFSL, BSD 2-clause, and GPLv3+ licenses. + (license (list license:public-domain license:psfl license:bsd-2 license:gpl3+)))) + +(define-public python2-docutils + (package-with-python2 python-docutils)) + +;; python2-sphinx fails its test suite with newer versions. +(define-public python2-docutils-0.14 + (package + (inherit python2-docutils) + (version "0.14") + (source (origin + (method url-fetch) + (uri (pypi-uri "docutils" version)) + (sha256 + (base32 + "0x22fs3pdmr42kvz6c654756wja305qv6cx1zbhwlagvxgr4xrji")))))) + +(define-public python-restructuredtext-lint + (package + (name "python-restructuredtext-lint") + (version "1.3.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "restructuredtext-lint" version)) + (sha256 + (base32 + "026rdy5h82ng4vqxk8fnprii9d6qxf7hkygiv0a8afjvdlsxmcwp")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs tests? #:allow-other-keys) + (when tests? + (add-installed-pythonpath inputs outputs) + (invoke "nosetests" "-v")) + #t))))) + (propagated-inputs + `(("python-docutils" ,python-docutils))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/twolfson/restructuredtext-lint") + (synopsis "reStructuredText linter") + (description "This package provides a linter for the reStructuredText +format.") + (license license:unlicense))) + +(define-public python-doc8 + (package + (name "python-doc8") + (version "0.8.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "doc8" version)) + (sha256 + (base32 + "0hw5w8mpgsp51qg8nnq28p7y1jiksvz7a0axnn5bkgss3af9zy1d")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs tests? #:allow-other-keys) + (when tests? + (add-installed-pythonpath inputs outputs) + (invoke "pytest" "-v")) + #t))))) + (propagated-inputs + `(("python-chardet" ,python-chardet) + ("python-docutils" ,python-docutils) + ("python-restructuredtext-lint" ,python-restructuredtext-lint) + ("python-six" ,python-six) + ("python-stevedore" ,python-stevedore))) + (native-inputs + `(("python-testtools" ,python-testtools) + ("python-pytest" ,python-pytest))) + (home-page "https://launchpad.net/doc8") + (synopsis + "Style checker for Sphinx (or other) RST documentation") + (description + "Doc8 is an opinionated style checker for reStructured Text and plain +text styles of documentation.") + (license license:asl2.0))) + +(define-public python-pygments + (package + (name "python-pygments") + (version "2.5.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Pygments" version)) + (sha256 + (base32 + "1zmhnswy0wxfn0xprs9aqsvx2c3kmzfn2wx14q8cv3vpkxdamj4q")))) + (build-system python-build-system) + (arguments + ;; FIXME: Tests require sphinx, which depends on this. + '(#:tests? #f)) + (home-page "https://pygments.org/") + (synopsis "Syntax highlighting") + (description + "Pygments is a syntax highlighting package written in Python.") + (license license:bsd-2))) + +(define-public python2-pygments + (package-with-python2 python-pygments)) + +(define-public python-bumpversion + (package + (name "python-bumpversion") + (version "0.5.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "bumpversion" version)) + (sha256 + (base32 + "0zn7694yfipxg35ikkfh7kvgl2fissha3dnqad2c5bvsvmrwhi37")))) + (build-system python-build-system) + (home-page "https://github.com/peritus/bumpversion") + (synopsis "Tool to bump software version") + (description "This tool provides a command-line interface (CLI) to bump a +software version simply.") + (license license:expat))) + +(define-public python-deprecated + (package + (name "python-deprecated") + (version "1.2.5") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/tantale/deprecated") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "14909glxxwwc4b9qpz2b9jdriwzi5n65ichw85xqppap5f79wcwz")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest")))))) + (propagated-inputs + `(("python-wrapt" ,python-wrapt))) + (native-inputs + `(("python-bumpversion" ,python-bumpversion) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-sphinx" ,python-sphinx) + ("python-tox" ,python-tox))) + (home-page "https://github.com/tantale/deprecated") + (synopsis "Python decorator to deprecate classes, functions or methods") + (description "The @code{deprecated} decorator provides a convenient way to deprecate +to deprecate classes, functions or methods.") + (license license:expat))) + +(define-public python-pygithub + (package + (name "python-pygithub") + (version "1.43.8") + (source + ;; We fetch from the Git repo because there are no tests in the PyPI + ;; archive. + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/PyGithub/PyGithub") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1625v558xga5mwhl9jqmibywy5qafmg1vqrirqz6zfq1la1d22mw")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + ;; Some tests rely on the network. + (add-after 'unpack 'disable-failing-tests + (lambda _ + (substitute* "tests/Issue142.py" + (("testDecodeJson") "disabled_testDecodeJson")) + #t)) + (add-before 'check 'prepare-for-tests + (lambda _ + (for-each (lambda (f) + (chmod f #o666)) + (find-files "./tests")) + (system* "python" "-m" "lib2to3" "-w" "-n" "tests") + (setenv "PYTHONPATH" + (string-append "./tests:" (getenv "PYTHONPATH"))) + #t))))) + (propagated-inputs + `(("python-deprecated" ,python-deprecated) + ("python-pyjwt" ,python-pyjwt) + ("python-requests" ,python-requests))) + (native-inputs `(("python-httpretty" ,python-httpretty))) + (home-page "https://pygithub.readthedocs.io/en/latest/") + (synopsis "Python library for the GitHub API") + (description "This library allows managing GitHub resources such as +repositories, user profiles, and organizations in your Python applications, +using version 3 of the GitHub application programming interface (API).") + (license license:lgpl3+))) + +(define-public python-rellu + (package + (name "python-rellu") + (version "0.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rellu" version)) + (sha256 + (base32 + "1w0arpj1sm7vh29nrbnca4pnp8sx42l07r17inwqcjjf9bhng66x")))) + (build-system python-build-system) + (propagated-inputs + `(("python-invoke" ,python-invoke) + ("python-pygithub" ,python-pygithub))) + (home-page "https://github.com/robotframework/rellu") + (synopsis "Utilities to create PyPI releases") + (description "This collection of utilities contains tooling and templates +to assist in creating releases on GitHub and publishing them on PyPI. It is +designed to be used by Robot Framework and tools and libraries in its +ecosystem, but can naturally be used also by other projects.") + (license license:asl2.0))) + +(define-public python-robotframework + (package + (name "python-robotframework") + (version "3.1.2") + ;; There are no tests in the PyPI archive. + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/robotframework/robotframework") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "16gnxy0qinh8fhs0qvhff5z2xh49c3cqgm0d7bfjw120df6x7fym")) + (patches (search-patches + "python-robotframework-honor-source-date-epoch.patch")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (add-before 'build 'build-and-install-doc + (lambda* (#:key outputs #:allow-other-keys) + (let* ((doc-output (assoc-ref outputs "doc")) + (doc (string-append doc-output "/share/" + ,name "-" ,version "/"))) + (invoke "invoke" "library-docs" "all") + (mkdir-p doc) + (copy-recursively "doc/libraries" + (string-append doc "/libraries")) + #t))) + (replace 'check + (lambda _ + (invoke "python" "utest/run.py")))))) + (native-inputs + `(("python-invoke" ,python-invoke) + ("python-rellu" ,python-rellu) + ("python:tk" ,python "tk"))) ;used when building the HTML doc + (outputs '("out" "doc")) + (home-page "https://robotframework.org") + (synopsis "Generic automation framework") + (description "Robot Framework is a generic automation framework for +acceptance testing, acceptance test driven development (ATDD), and robotic +process automation (RPA).") + (license license:asl2.0))) + +(define-public python-robotframework-lint + ;; There is no properly tagged release; the commit below seems to correspond + ;; to the 0.9 stable release available from PyPI. The tests are not + ;; included in the PyPI archive, so we fetch the sources from the upstream + ;; Git repo. + (let ((commit "e851879bab1f63e4e53b34a4dc8a67ed95102830") + (revision "1")) + (package + (name "python-robotframework-lint") + (version (git-version "0.9.0" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/boakley/robotframework-lint") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1p6fknqg5sb9qz5857ji4a877657vgfjm5v3zn45994parx6ml1m")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "python" "-m" "robot" "-A" + "tests/conf/default.args" "tests")))))) + (propagated-inputs + `(("python-robotframework" ,python-robotframework))) + (home-page "https://github.com/boakley/robotframework-lint/") + (synopsis "Static analysis tool (linter) for Robot Framework") + (description "This package provides the @code{rflint} command-line +utility, a static analysis tool (linter) for Robot Framework source files.") + (license license:asl2.0)))) + +(define-public python-robotframework-sshlibrary + (package + (name "python-robotframework-sshlibrary") + (version "3.3.0") + ;; There are no tests in the PyPI archive. + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/robotframework/SSHLibrary") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1mk6dz2jqqndbx4yji09012q6rmadnqdywi7czvj62b0s07dr3r2")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'build 'build-and-install-doc + (lambda* (#:key outputs #:allow-other-keys) + (let* ((doc-output (assoc-ref outputs "doc")) + (doc (string-append doc-output "/share/" + ,name "-" ,version "/"))) + (invoke "chmod" "-R" "+w" "docs") + (invoke "invoke" "kw-docs" "project-docs") + (mkdir-p doc) + (for-each delete-file (find-files "docs" "\\.rst")) + (copy-recursively "docs" doc) + #t))) + (replace 'check + (lambda _ + ;; Some tests require an SSH server; we remove them. + (delete-file "utest/test_client_api.py") + (delete-file "utest/test_scp.py") + (invoke "python" "utest/run.py")))))) + (propagated-inputs + `(("python-robotframework" ,python-robotframework) + ("python-paramiko" ,python-paramiko) + ("python-scp" ,python-scp))) + (native-inputs + `(("openssh" ,openssh) + ("which" ,which) + ;; To generate the documentation + ("python-docutils" ,python-docutils) + ("python-invoke" ,python-invoke) + ("python-pygments" ,python-pygments) + ("python-rellu" ,python-rellu))) + (outputs '("out" "doc")) + (home-page "https://github.com/robotframework/SSHLibrary") + (synopsis "Robot Framework library for SSH and SFTP") + (description "SSHLibrary is a Robot Framework library providing support +for SSH and SFTP. It has the following main usages: +@itemize @bullet +@item Executing commands on the remote machine, either blocking or non-blocking. +@item Writing and reading in an interactive shell. +@item Transferring files and directories over SFTP. +@item Ensuring that files and directories exist on the remote machine. +@end itemize") + (license license:asl2.0))) + +(define-public python-rstr + (package + (name "python-rstr") + (version "2.2.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rstr" version)) + (sha256 + (base32 + "197dw8mbq0pjjz1l6h1ksi62vgn7x55d373ch74y06744qiq5sjx")))) + (build-system python-build-system) + (home-page + "http://bitbucket.org/leapfrogdevelopment/rstr/overview") + (synopsis "Generate random strings in Python") + (description "This package provides a python module for generating +random strings of various types. It could be useful for fuzz testing, +generating dummy data, or other applications. It has no dependencies +outside the standard library.") + (license license:bsd-3))) + +(define-public python-scp + (package + (name "python-scp") + (version "0.13.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "scp" version)) + (sha256 + (base32 + "1crlpw9lnn58fs1c1rmh7s7s9y5gkgpgjsqlvg9qa51kq1knx7gg")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ;tests require an SSH server + (propagated-inputs + `(("python-paramiko" ,python-paramiko))) + (home-page "https://github.com/jbardin/scp.py") + (synopsis "SCP protocol module for Python and Paramiko") + (description "The scp module extends the Paramiko library to send and +receive files via the SCP1 protocol, as implemented by the OpenSSH +@command{scp} program.") + (license license:gpl2+))) + +(define-public python-rst.linker + (package + (name "python-rst.linker") + (version "1.11") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rst.linker" version)) + (sha256 + (base32 "0pqsfqqx8h0pq21k8l3k62kznrgaj2ala93c64s4d9rpbr4mgkd2")))) + (build-system python-build-system) + (propagated-inputs + `(("python-dateutil" ,python-dateutil) + ("python-six" ,python-six))) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm))) + ;; Test would require path.py, which would introduce a cyclic dependence. + (arguments `(#:tests? #f)) + ;; Note: As of version 1.7 the documentation is not worth building. + (home-page "https://github.com/jaraco/rst.linker") + (synopsis "Sphinx plugin to add links and timestamps") + (description "rst.linker automatically replaces text by a +reStructuredText external reference or timestamps. It's primary purpose is to +augment the changelog, but it can be used for other documents, too.") + (license license:expat))) + +(define-public python2-rst.linker + (package-with-python2 python-rst.linker)) + +(define-public python-feedgenerator + (package + (name "python-feedgenerator") + (version "1.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri "feedgenerator" version)) + (sha256 + (base32 + "01mirwkm7xfx539hmvj7g9da1j51gw5lsx74dr0glizskjm5vq2s")) + (modules '((guix build utils))) + (snippet + '(begin + ;; Remove pre-compiled .pyc files from source. + (for-each delete-file-recursively + (find-files "." "__pycache__" #:directories? #t)) + (for-each delete-file (find-files "." "\\.pyc$")) + #t)))) + (build-system python-build-system) + (propagated-inputs + `(("python-pytz" ,python-pytz) + ("python-six" ,python-six))) + (home-page "https://github.com/getpelican/feedgenerator") + (synopsis + "Standalone version of Django's Atom/RSS feed generator") + (description + "Feedgenerator-py3k is a standalone version of Django's feedgenerator, +which can produce feeds in RSS 2.0, RSS 0.91, and Atom formats.") + (license license:bsd-3))) + +(define-public python2-feedgenerator + (package-with-python2 python-feedgenerator)) + +(define-public python-toml + (package + (name "python-toml") + (version "0.10.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "toml" version)) + (sha256 + (base32 + "03wbqm5cn685cwx2664hjdpz370njl7lf0yal8s0dkp5w4mn2swj")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ;no tests suite in release + (home-page "https://github.com/uiri/toml") + (synopsis "Library for TOML") + (description + "@code{toml} is a library for parsing and creating Tom's Obvious, Minimal +Language (TOML) configuration files.") + (license license:expat))) + +(define-public python-jsonrpc-server + (package + (name "python-jsonrpc-server") + (version "0.3.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-jsonrpc-server" version)) + (sha256 + (base32 + "0dzya99nbi4mw7q85vmyw1wfgbx5dpmysnvm0bwx5m4xbi4zafy7")))) + (build-system python-build-system) + (propagated-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest) + ("python-ujson" ,python-ujson-1))) + (home-page + "https://github.com/palantir/python-jsonrpc-server") + (synopsis "JSON RPC 2.0 server library") + (description + "This package provides a JSON RPC 2.0 server library for Python.") + (license license:expat))) + +(define-public python-pydocstyle + (package + (name "python-pydocstyle") + (version "3.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pydocstyle" version)) + (sha256 + (base32 + "1m1xv9clkg9lgzyza6dnj359z04vh5g0h49nhzghv7lg81gchhap")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six) + ("python-snowballstemmer" ,python-snowballstemmer))) + (home-page + "https://github.com/PyCQA/pydocstyle/") + (synopsis "Python docstring style checker") + (description + "This package provides a style checker for the Python Language +Server (PLS).") + (license license:expat))) + +(define-public python-language-server + (package + (name "python-language-server") + (version "0.34.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-language-server" version)) + (sha256 + (base32 + "0gfjjlj7yg2nf8wkbrshwaljkwlqja4n7s1x949f495anmkg8vxr")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pluggy" ,python-pluggy) + ("python-jsonrpc-server" ,python-jsonrpc-server) + ("python-jedi" ,python-jedi) + ("python-yapf" ,python-yapf) + ("python-pyflakes" ,python-pyflakes) + ("python-pydocstyle" ,python-pydocstyle) + ("python-pycodestyle" ,python-pycodestyle) + ("python-mccabe" ,python-mccabe) + ("python-rope" ,python-rope) + ("python-autopep8" ,python-autopep8) + ("python-flake8" ,python-flake8) + ("python-pylint" ,python-pylint))) + (home-page "https://github.com/palantir/python-language-server") + (synopsis "Python implementation of the Language Server Protocol") + (description + "The Python Language Server (pyls) is an implementation of the Python 3 +language specification for the Language Server Protocol (LSP). This tool is +used in text editing environments to provide a complete and integrated +feature-set for programming Python effectively.") + (license license:expat))) + +(define-public python-pathspec + (package + (name "python-pathspec") + (version "0.7.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pathspec" version)) + (sha256 + (base32 + "15lvs4awlg8xzl0l4gk9y53xx4yqmqvsv44pglv39m70y85afajn")))) + (build-system python-build-system) + (home-page "https://github.com/cpburnz/python-path-specification") + (synopsis "Utility library for gitignore style pattern matching of file paths") + (description + "This package provides a utility library for gitignore style pattern +matching of file paths.") + (license license:mpl2.0))) + +(define-public python-black + (package + (name "python-black") + (version "19.10b0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "black" version)) + (sha256 + (base32 + "0f8mr0yzj78q1dx7v6ggbgfir2wv0n5z2shfbbvfdq7910xbgvf2")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'patch-source-shebangs 'patch-extra-shebangs + (lambda _ + (let ((python3 (which "python3"))) + (substitute* '("tests/data/fmtonoff.py" + "tests/data/string_prefixes.py" + "tests/data/function.py" + "tests/data/python37.py") + (("#!/usr/bin/env python3(\\.[0-9]+)?" _ minor-version) + (string-append "#!" python3 (if (string? minor-version) + minor-version + ""))))) + #t)) + (add-after 'unpack 'disable-broken-tests + (lambda _ + ;; These tests are supposed to be skipped when the blackd + ;; dependencies are missing, but this doesn't quite work. + (substitute* "tests/test_black.py" + (("( *)class BlackDTestCase.*" match indent) + (string-append indent "@unittest.skip(\"no blackd deps\")\n" + indent "class BlackDTestCase(unittest.TestCase):\n")) + (("web.Application") "False") + (("@unittest_run_loop") "")) + + ;; Patching the above file breaks the self test + (substitute* "tests/test_black.py" + (("( *)def test_self" match indent) + (string-append indent "@unittest.skip(\"guix\")\n" match))) + #t))))) + (propagated-inputs + `(("python-click" ,python-click) + ("python-attrs" ,python-attrs) + ("python-appdirs" ,python-appdirs) + ("python-pathspec" ,python-pathspec) + ("python-regex" ,python-regex) + ("python-toml" ,python-toml) + ("python-typed-ast" ,python-typed-ast))) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm))) + (home-page "https://github.com/ambv/black") + (synopsis "The uncompromising code formatter") + (description "Black is the uncompromising Python code formatter.") + (license license:expat))) + +(define-public python-blinker + (package + (name "python-blinker") + (version "1.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "blinker" version)) + (sha256 + (base32 + "1dpq0vb01p36jjwbhhd08ylvrnyvcc82yxx3mwjx6awrycjyw6j7")))) + (build-system python-build-system) + (home-page "https://pythonhosted.org/blinker/") + (synopsis "Fast, simple object-to-object and broadcast signaling") + (description + "Blinker provides a fast dispatching system that allows any number of +interested parties to subscribe to events, or \"signals\".") + (license license:expat))) + +(define-public python2-blinker + (package-with-python2 python-blinker)) + +(define-public pelican + (package + (name "pelican") + (version "4.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pelican" version)) + (sha256 + (base32 + "0mp7hjyhs38ag1hyfcy882g400z0babqi72pnli46dqijfhajzmy")))) + (build-system python-build-system) + (propagated-inputs + `(("python-blinker" ,python-blinker) + ("python-dateutil" ,python-dateutil) + ("python-docutils" ,python-docutils) + ("python-feedgenerator" ,python-feedgenerator) + ("python-jinja2" ,python-jinja2) + ("python-markdown" ,python-markdown) + ("python-pygments" ,python-pygments) + ("python-pytz" ,python-pytz) + ("python-six" ,python-six) + ("python-unidecode" ,python-unidecode))) + (home-page "https://getpelican.com/") + (arguments + `(;; XXX Requires a lot more packages to do unit tests :P + #:tests? #f)) + (synopsis "Python-based static site publishing system") + (description + "Pelican is a tool to generate a static blog from reStructuredText, +Markdown input files, and more. Pelican uses Jinja2 for templating +and is very extensible.") + (license license:agpl3+))) + +(define-public mallard-ducktype + (package + (name "mallard-ducktype") + (version "1.0.2") + (source + (origin + (method git-fetch) + ;; git-reference because tests are not included in pypi source tarball + ;; https://issues.guix.gnu.org/issue/36755#2 + (uri (git-reference + (url "https://github.com/projectmallard/mallard-ducktype") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1jk9bfz7g04ip78s03b0xak6d54rj4h9zpgadkziy1ji216g6y4c")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (with-directory-excursion "tests" + (invoke "sh" "runtests"))))))) + (home-page "http://projectmallard.org") + (synopsis "Convert Ducktype to Mallard documentation markup") + (description + "Ducktype is a lightweight syntax that can represent all the semantics +of the Mallard XML documentation system. Ducktype files can be converted to +Mallard using the @command{ducktype} tool. The yelp-tools package +provides additional functionality on the produced Mallard documents.") + (license license:expat))) + +(define-public python-cython + (package + (name "python-cython") + (version "0.29.17") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Cython" version)) + (sha256 + (base32 + "1wnaz40hdw4mg5acz5gqb6bhjhn4cvfxg0xdzfy7aa6qn665hqb3")))) + (build-system python-build-system) + ;; we need the full python package and not just the python-wrapper + ;; because we need libpython3.3m.so + (inputs + `(("python" ,python))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'set-HOME + ;; some tests require access to "$HOME/.cython" + (lambda _ (setenv "HOME" "/tmp") #t)) + (replace 'check + (lambda _ + ;; Disable compiler optimizations to greatly reduce the running + ;; time of the test suite. + (setenv "CFLAGS" "-O0") + + (invoke "python" "runtests.py" "-vv" + "-j" (number->string (parallel-job-count)) + ;; XXX: On 32-bit architectures, running the parallel tests + ;; fails on many-core systems, see + ;; . + ,@(if (not (target-64bit?)) + '("-x" "run.parallel") + '()))))))) + (home-page "https://cython.org/") + (synopsis "C extensions for Python") + (description "Cython is an optimising static compiler for both the Python +programming language and the extended Cython programming language. It makes +writing C extensions for Python as easy as Python itself.") + (license license:asl2.0) + (properties `((python2-variant . ,(delay python2-cython)))))) + +(define-public python2-cython + (let ((base (package-with-python2 (strip-python2-variant python-cython)))) + (package + (inherit base) + (name "python2-cython") + (inputs + `(("python-2" ,python-2))) ;this is not automatically changed + (arguments + (substitute-keyword-arguments (package-arguments base) + ((#:phases phases) + `(modify-phases ,phases + (add-before 'check 'adjust-test_embed + (lambda _ + (substitute* "runtests.py" + ;; test_embed goes great lengths to find the static libpythonX.Y.a + ;; so it can give the right -L flag to GCC when embedding static + ;; builds of Python. It is unaware that the Python "config" + ;; directory (where the static library lives) was renamed in + ;; Python 3, and falls back to sysconfig.get_config_var('LIBDIR'), + ;; which works fine, because that is where the shared library is. + ;; + ;; It also appears to be unaware that the Makefile in Demos/embed + ;; already unconditionally pass the static library location to GCC, + ;; after checking sysconfig.get_config_var('LIBPL). + ;; + ;; The effect is that the linker is unable to resolve libexpat + ;; symbols when building for Python 2, because neither the Python 2 + ;; shared library nor Expat is available. To fix it, we can either + ;; add Expat as an input and make it visible to the linker, or just + ;; prevent it from overriding the Python shared library location. + ;; The end result is identical, so we take the easy route. + ((" or libname not in os\\.listdir\\(libdir\\)") + "")) + #t))))))))) + +;; The RPython toolchain currently does not support Python 3. +(define-public python2-rpython + (package + (name "python2-rpython") + (version "0.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rpython" version)) + (sha256 + (base32 + "02z9cvxf0y41dcvwnvf2zn0albhhw1drvjjbq27m6i1piw1k6fc0")))) + (build-system python-build-system) + (arguments `(#:python ,python-2)) + (native-inputs + `(("python2-pytest" ,python2-pytest))) ; needed for running tests + (home-page "https://rpython.readthedocs.org") + (synopsis "Framework for implementing interpreters and virtual machines") + (description "RPython is a translation and support framework for +producing implementations of dynamic languages, emphasizing a clean separation +between language specification and implementation aspects.") + (license license:expat))) + +;; NOTE: when upgrading numpy please make sure that python-pandas and +;; python-scipy still build, as these three packages are often used together. +(define-public python-numpy + (package + (name "python-numpy") + (version "1.17.3") + (source + (origin + (method url-fetch) + (uri (string-append + "https://github.com/numpy/numpy/releases/download/v" + version "/numpy-" version ".tar.gz")) + (sha256 + (base32 + "1ak9dmjja0q90a7fsxli51ypcwssh8c4pb6f8wkrsnf2xgdk6dy9")))) + (build-system python-build-system) + (inputs + `(("openblas" ,openblas) + ("lapack" ,lapack))) + (native-inputs + `(("python-cython" ,python-cython) + ("python-pytest" ,python-pytest) + ("gfortran" ,gfortran))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'build 'configure-blas-lapack + (lambda* (#:key inputs #:allow-other-keys) + (call-with-output-file "site.cfg" + (lambda (port) + (format port + "[openblas] +libraries = openblas +library_dirs = ~a/lib +include_dirs = ~a/include + +# backslash-n to make emacs happy +\n[lapack] +lapack_libs = lapack +library_dirs = ~a/lib +include_dirs = ~a/include +" + (assoc-ref inputs "openblas") + (assoc-ref inputs "openblas") + (assoc-ref inputs "lapack") + (assoc-ref inputs "lapack")))) + #t)) + (add-before 'build 'fix-executable-paths + (lambda* (#:key inputs #:allow-other-keys) + ;; Make /gnu/store/...-bash-.../bin/sh the default shell, + ;; instead of /bin/sh. + (substitute* "numpy/distutils/exec_command.py" + (("(os.environ.get\\('SHELL', ')(/bin/sh'\\))" match match-start match-end) + (string-append match-start (assoc-ref inputs "bash") match-end))) + ;; Use "gcc" executable, not "cc". + (substitute* "numpy/distutils/system_info.py" + (("c = distutils\\.ccompiler\\.new_compiler\\(\\)") + "c = distutils.ccompiler.new_compiler(); c.set_executables(compiler='gcc',compiler_so='gcc',linker_exe='gcc',linker_so='gcc -shared')")) + #t)) + ;; Tests can only be run after the library has been installed and not + ;; within the source directory. + (delete 'check) + (add-after 'install 'check + (lambda* (#:key outputs inputs #:allow-other-keys) + ;; Make installed package available for running the tests + (add-installed-pythonpath inputs outputs) + ;; Make sure "f2py" etc is found. + (setenv "PATH" (string-append (assoc-ref outputs "out") "/bin" + ":" (getenv "PATH"))) + (with-directory-excursion "/tmp" + (invoke "python" "-c" + "import numpy; numpy.test(verbose=2)"))))))) + (home-page "https://numpy.org") + (synopsis "Fundamental package for scientific computing with Python") + (description "NumPy is the fundamental package for scientific computing +with Python. It contains among other things: a powerful N-dimensional array +object, sophisticated (broadcasting) functions, tools for integrating C/C++ +and Fortran code, useful linear algebra, Fourier transform, and random number +capabilities.") + (properties `((python2-variant . ,(delay python2-numpy)))) + (license license:bsd-3))) + +;; Numpy 1.16.x are the last versions that support Python 2. +(define-public python2-numpy + (let ((numpy (package-with-python2 + (strip-python2-variant python-numpy)))) + (package/inherit + numpy + (version "1.16.5") + (source (origin + (method url-fetch) + (uri (string-append + "https://github.com/numpy/numpy/releases/download/v" + version "/numpy-" version ".tar.gz")) + (sha256 + (base32 + "0lg1cycxzi4rvvrd5zxinpdz0ni792fpx6xjd75z1923zcac8qrb"))))))) + +;; NOTE: NumPy 1.8 is packaged only for Python 2 because it is of +;; interest only for legacy code going back to NumPy's predecessor +;; Numeric. +(define-public python2-numpy-1.8 + (package (inherit python2-numpy) + (version "1.8.2") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/numpy/numpy") + (commit (string-append "v" version)))) + (file-name (git-file-name "numpy" version)) + (sha256 + (base32 + "0ikgi15rsqwbkfsjjxrwh40lqyal2wvyp3923y6w6ch3dcr82sfk")))) + (arguments + (substitute-keyword-arguments (package-arguments python2-numpy) + ((#:phases phases) + `(modify-phases ,phases + (replace 'configure-blas-lapack + (lambda* (#:key inputs #:allow-other-keys) + (call-with-output-file "site.cfg" + (lambda (port) + (format port + "[openblas] +libraries = openblas,lapack +library_dirs = ~a/lib:~a/lib +include_dirs = ~a/include:~a/include +" + (assoc-ref inputs "openblas") + (assoc-ref inputs "lapack") + (assoc-ref inputs "openblas") + (assoc-ref inputs "lapack")))) + #t)))))) + (native-inputs + `(("python2-nose" ,python2-nose))) + (description "NumPy is the fundamental package for scientific computing +with Python. It contains among other things: a powerful N-dimensional array +object, sophisticated (broadcasting) functions, tools for integrating C/C++ +and Fortran code, useful linear algebra, Fourier transform, and random number +capabilities. Version 1.8 is the last one to contain the numpy.oldnumeric API +that includes the compatibility layer numpy.oldnumeric with NumPy's predecessor +Numeric.") + (license license:bsd-3))) + +(define-public python-munch + (package + (name "python-munch") + (version "2.0.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "munch" version)) + (sha256 + (base32 + "1cmqg91xnqx8gvnh4pmp0bfl1dfcm65d5p9mg73zz8pkjhx6h80l")))) + (build-system python-build-system) + (home-page "https://github.com/Infinidat/munch") + (synopsis "Dot-accessible dictionary") + (description "Munch is a dot-accessible dictionary similar to JavaScript +objects.") + (license license:expat))) + +(define-public python2-munch + (package-with-python2 python-munch)) + +(define-public python-colormath + (package + (name "python-colormath") + (version "3.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "colormath" version)) + (sha256 + (base32 + "05qjycgxp3p2f9n6lmic68sxmsyvgnnlyl4z9w7dl9s56jphaiix")))) + (build-system python-build-system) + (propagated-inputs + `(("python-networkx" ,python-networkx) + ("python-numpy" ,python-numpy))) + (home-page "https://github.com/gtaylor/python-colormath") + (synopsis "Color math and conversion library") + (description + "This is a Python library for color math and conversions.") + (license license:bsd-3))) + +(define-public python2-colormath + (package-with-python2 python-colormath)) + +(define-public python-spectra + (package + (name "python-spectra") + (version "0.0.11") + (source + (origin + (method url-fetch) + (uri (pypi-uri "spectra" version)) + (sha256 + (base32 + "1f322x914bhkg6r5gv1vmnir3iy0k5kih0fd2gp3rdkw32jn5cwf")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (invoke "nosetests" "-v")))))) + (propagated-inputs + `(("python-colormath" ,python-colormath))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/jsvine/spectra") + (synopsis "Color scales and color conversion") + (description + "This package provides a Python library intended to make color math, +color scales, and color space conversion easy. It has support for: + +@enumerate +@item Color scales +@item Color ranges +@item Color blending +@item Brightening/darkening colors +@item Saturating/desaturating colors +@item Conversion to/from multiple color spaces. +@end enumerate\n") + (license license:expat))) + +(define-public python2-spectra + (package-with-python2 python-spectra)) + +(define-public python-numpy-documentation + (package + (name "python-numpy-documentation") + (version (package-version python-numpy)) + (source (package-source python-numpy)) + (build-system python-build-system) + (native-inputs + `(("python-matplotlib" ,python-matplotlib) + ("python-numpy" ,python-numpy) + ("pkg-config" ,pkg-config) + ("python-sphinx" ,python-sphinx) + ("python-numpydoc" ,python-numpydoc) + ("texlive" ,(texlive-union (list texlive-fonts-cm-super + texlive-fonts-ec + texlive-generic-ifxetex + texlive-generic-pdftex + texlive-amsfonts + texlive-latex-capt-of + texlive-latex-cmap + texlive-latex-environ + texlive-latex-eqparbox + texlive-latex-etoolbox + texlive-latex-expdlist + texlive-latex-fancyhdr + texlive-latex-fancyvrb + texlive-latex-fncychap + texlive-latex-float + texlive-latex-framed + texlive-latex-geometry + texlive-latex-graphics + texlive-latex-hyperref + texlive-latex-mdwtools + texlive-latex-multirow + texlive-latex-needspace + texlive-latex-oberdiek + texlive-latex-parskip + texlive-latex-preview + texlive-latex-tabulary + texlive-latex-threeparttable + texlive-latex-titlesec + texlive-latex-trimspaces + texlive-latex-ucs + texlive-latex-upquote + texlive-latex-url + texlive-latex-varwidth + texlive-latex-wrapfig))) + ("texinfo" ,texinfo) + ("perl" ,perl) + ("scipy-sphinx-theme" + ,(origin ; The build script expects scipy-sphinx-theme as a git submodule + (method git-fetch) + (uri (git-reference + (url "https://github.com/scipy/scipy-sphinx-theme") + (commit "c466764e2231ba132c09826b5b138fffa1cfcec3"))) + (sha256 + (base32 + "0q2y87clwlsgc7wvlsn9pzyssybcq10plwhq2w1ydykfsyyqbmkl")))) + ,@(package-native-inputs python-numpy))) + (arguments + `(#:tests? #f ; we're only generating the documentation + #:phases + (modify-phases %standard-phases + (delete 'build) + (replace 'install + (lambda* (#:key inputs outputs #:allow-other-keys) + (let* ((data (string-append (assoc-ref outputs "out") "/share")) + (doc (string-append + data "/doc/" ,name "-" + ,(package-version python-numpy))) + (info-reader (string-append data "/info")) + (html (string-append doc "/html")) + (scipy-sphinx-theme "scipy-sphinx-theme") + (sphinx-theme-checkout (assoc-ref inputs scipy-sphinx-theme)) + (pyver ,(string-append "PYVER="))) + + ;; FIXME: this is needed to for texlive-union to generate + ;; fonts, which are not found. + (setenv "HOME" "/tmp") + + (with-directory-excursion "doc" + (copy-recursively sphinx-theme-checkout scipy-sphinx-theme) + (mkdir-p html) + (invoke "make" "html" pyver) + (invoke "make" "latex" "PAPER=a4" pyver) + (invoke "make" "-C" "build/latex" + "all-pdf" "PAPER=a4" pyver) + ;; FIXME: Generation of the info file fails. + ;; (invoke "make" "info" pyver) + ;; (mkdir-p info) + ;; (copy-file "build/texinfo/numpy.info" + ;; (string-append info "/numpy.info")) + (for-each (lambda (file) + (copy-file (string-append "build/latex" file) + (string-append doc file))) + '("/numpy-ref.pdf" "/numpy-user.pdf")) + (with-directory-excursion "build/html" + (for-each (lambda (file) + (let* ((dir (dirname file)) + (tgt-dir (string-append html "/" dir))) + (unless (equal? "." dir) + (mkdir-p tgt-dir)) + (install-file file html))) + (find-files "." ".*"))))) + #t))))) + (home-page (package-home-page python-numpy)) + (synopsis "Documentation for the python-numpy package") + (description (package-description python-numpy)) + (license (package-license python-numpy)))) + +(define-public python2-numpy-documentation + (let ((numpy-documentation (package-with-python2 python-numpy-documentation))) + (package + (inherit numpy-documentation) + (native-inputs `(("python2-functools32" ,python2-functools32) + ,@(package-native-inputs numpy-documentation)))))) + +(define-public python-pygit2 + (package + (name "python-pygit2") + (version "1.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pygit2" version)) + (sha256 + (base32 "1hs0pqqzn1yjxqk86nq7p0lvsklwnlyi5xwyzr7d5nrs19dmsjbg")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; tests don't run correctly in our environment + (propagated-inputs + `(("python-cached-property" ,python-cached-property) + ("python-cffi" ,python-cffi) + ("libgit2" ,libgit2))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/libgit2/pygit2") + (synopsis "Python bindings for libgit2") + (description "Pygit2 is a set of Python bindings to the libgit2 shared +library, libgit2 implements Git plumbing.") + ;; GPL2.0 only, with linking exception. + (license license:gpl2))) + +(define-public python-patiencediff + (package + (name "python-patiencediff") + (version "0.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "patiencediff" version)) + (sha256 + (base32 + "0yjk50lsd4gnllxls925xbcdxwvmda37w2a1shk0p1nvl3fcha6q")))) + (build-system python-build-system) + (home-page "https://www.breezy-vcs.org/") + (synopsis "Python implementation of the patiencediff algorithm") + (description + "This package contains a Python implementation of the @code{patiencediff} +algorithm. Patiencediff provides a good balance of performance, nice output for +humans, and implementation simplicity.") + (license license:gpl2))) + +(define-public python-pyparsing + (package + (name "python-pyparsing") + (version "2.4.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyparsing" version)) + (sha256 + (base32 "17wn5zlijc9m9zj26gy3f541y7smpj8rfhl51d025c2gm210b0sc")))) + (build-system python-build-system) + (outputs '("out" "doc")) + (arguments + `(#:tests? #f ; no test target + #:phases + (modify-phases %standard-phases + (add-after 'install 'install-doc + (lambda* (#:key outputs #:allow-other-keys) + (let* ((doc (string-append (assoc-ref outputs "doc") + "/share/doc/" ,name "-" ,version)) + (html-doc (string-append doc "/html")) + (examples (string-append doc "/examples"))) + (mkdir-p html-doc) + (mkdir-p examples) + (for-each + (lambda (dir tgt) + (map (lambda (file) + (install-file file tgt)) + (find-files dir ".*"))) + (list "docs" "htmldoc" "examples") + (list doc html-doc examples)) + #t)))))) + (home-page "https://github.com/pyparsing/pyparsing") + (synopsis "Python parsing class library") + (description + "The pyparsing module is an alternative approach to creating and +executing simple grammars, vs. the traditional lex/yacc approach, or the use +of regular expressions. The pyparsing module provides a library of classes +that client code uses to construct the grammar directly in Python code.") + (license license:expat))) + +(define-public python2-pyparsing + (package-with-python2 python-pyparsing)) + +(define-public python-numpydoc + (package + (name "python-numpydoc") + (version "0.8.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "numpydoc" version)) + (sha256 + (base32 + "1zazxg3m8j4fksv3f7v7vpf4bj9qb1vj3r326am0vdip141vzx31")))) + (build-system python-build-system) + (propagated-inputs + `(("python-sphinx" ,python-sphinx))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://pypi.org/project/numpydoc/") + (synopsis + "Numpy's Sphinx extensions") + (description + "Sphinx extension to support docstrings in Numpy format.") + (license license:bsd-2))) + +(define-public python2-numpydoc + (package-with-python2 python-numpydoc)) + +(define-public python-numexpr + (package + (name "python-numexpr") + (version "2.6.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "numexpr" version)) + (sha256 + (base32 + "1frnbcwmsi312154x274xl28xazr1k8vjby83fwyla2n10a81bgq")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) ; no tests included + (propagated-inputs + `(("python-numpy" ,python-numpy))) + (home-page "https://github.com/pydata/numexpr") + (synopsis "Fast numerical expression evaluator for NumPy") + (description + "Numexpr is a fast numerical expression evaluator for NumPy. With it, +expressions that operate on arrays are accelerated and use less memory than +doing the same calculation in Python. In addition, its multi-threaded +capabilities can make use of all your cores, which may accelerate +computations, most specially if they are not memory-bounded (e.g. those using +transcendental functions).") + (license license:expat))) + +(define-public python2-numexpr + (package-with-python2 python-numexpr)) + +(define-public python-cycler + (package + (name "python-cycler") + (version "0.10.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "cycler" version)) + (sha256 + (base32 + "1n69n23fak1gjxlrbhqisi2b9pv3ckrfj98llx3p53953082syyd")))) + (build-system python-build-system) + (arguments + ;; XXX: The current version requires 'coveralls' which we don't have. + ;; Enable this for the next release which uses 'python-pytest'. + '(#:tests? #f)) + (propagated-inputs + `(("python-six" ,python-six))) + (home-page "http://matplotlib.org/cycler/") + (synopsis "Composable keyword argument iterator") + (description + "When using @code{matplotlib} and plotting more than one line, it is +common to want to be able to want to be able to cycle over one or more artist +styles; but the plotting logic can quickly become involved. +To address this and enable easy cycling over arbitrary @code{kwargs}, the +@code{Cycler} class was developed.") + (license license:bsd-3))) + +(define-public python2-cycler + (package-with-python2 python-cycler)) + +(define-public python-colorspacious + (package + (name "python-colorspacious") + (version "1.1.2") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/njsmith/colorspacious") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0x7nkphr6g5ql5fvgss8l56rgiyjgh6fm8zzs73i94ci9wzlm63w")))) + (build-system python-build-system) + (propagated-inputs + `(("python-numpy" ,python-numpy))) + (native-inputs + `(("python-nose" ,python-nose))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "nosetests" "--all-modules" "-v" "colorspacious")))))) + (home-page "https://github.com/njsmith/colorspacious") + (synopsis "Python library for colorspace conversions") + (description "@code{colorspacious} is a Python library that lets you +convert between colorspaces like sRGB, XYZ, CIEL*a*b*, CIECAM02, CAM02-UCS, etc.") + (license license:expat))) + +(define-public python2-colorspacious + (package-with-python2 python-colorspacious)) + +(define-public python-matplotlib + (package + (name "python-matplotlib") + (version "3.1.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "matplotlib" version)) + (sha256 + (base32 + "1nmshfqh7wyg15i16hx1yiylcvzkws29ivn66n3i0wyqwcpjr3lf")))) + (build-system python-build-system) + (propagated-inputs ; the following packages are all needed at run time + `(("python-cycler" ,python-cycler) + ("python-kiwisolver" ,python-kiwisolver) + ("python-pyparsing" ,python-pyparsing) + ("python-pygobject" ,python-pygobject) + ("gobject-introspection" ,gobject-introspection) + ("python-tkinter" ,python "tk") + ("python-dateutil" ,python-dateutil) + ("python-numpy" ,python-numpy) + ("python-pillow" ,python-pillow) + ("python-pytz" ,python-pytz) + ("python-six" ,python-six) + ;; From version 1.4.0 'matplotlib' makes use of 'cairocffi' instead of + ;; 'pycairo'. However, 'pygobject' makes use of a 'pycairo' 'context' + ;; object. For this reason we need to import both libraries. + ;; https://cairocffi.readthedocs.io/en/stable/cffi_api.html#converting-pycairo-wrappers-to-cairocffi + ("python-pycairo" ,python-pycairo) + ("python-cairocffi" ,python-cairocffi))) + (inputs + `(("libpng" ,libpng) + ("imagemagick" ,imagemagick) + ("freetype" ,freetype) + ("cairo" ,cairo) + ("glib" ,glib) + ;; FIXME: Add backends when available. + ;("python-wxpython" ,python-wxpython) + ("tcl" ,tcl) + ("tk" ,tk))) + (native-inputs + `(("pkg-config" ,pkg-config) + ("python-pytest" ,python-pytest) + ("python-mock" ,python-mock) + ("unzip" ,unzip) + ("jquery-ui" + ,(origin + (method url-fetch) + (uri "https://jqueryui.com/resources/download/jquery-ui-1.12.1.zip") + (sha256 + (base32 + "0kb21xf38diqgxcdi1z3s9ssq36pldvyqxy56hn6pcva6rs3c8zq")))))) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; XXX We disable all image comparison tests because we're using a + ;; newer version of FreeType than matplotlib expects. This leads to + ;; minor differences throughout the tests. + (add-after 'unpack 'fix-and-disable-failing-tests + (lambda _ + (substitute* (append (find-files "lib/matplotlib/tests/" + "test_.*\\.py$") + (find-files "lib/mpl_toolkits/tests" + "test_.*\\.py$")) + (("^from matplotlib" match) + (string-append "import pytest\n" match)) + (("( *)@image_comparison" match indent) + (string-append indent + "@pytest.mark.skip(reason=\"unknown minor image differences\")\n" + match))) + (substitute* "lib/matplotlib/tests/test_animation.py" + (("/bin/sh") (which "sh"))) + (for-each delete-file + ;; test_normal_axes, test_get_tightbbox_polar + '("lib/matplotlib/tests/test_axes.py" + ;; We don't use the webagg backend and this test forces it. + "lib/matplotlib/tests/test_backend_webagg.py" + ;; test_outward_ticks + "lib/matplotlib/tests/test_tightlayout.py" + ;; test_hidden_axes fails with minor extent + ;; differences, possibly due to the use of a + ;; different version of FreeType. + "lib/matplotlib/tests/test_constrainedlayout.py" + ;; Fontconfig returns no fonts. + "lib/matplotlib/tests/test_font_manager.py")) + #t)) + (add-before 'install 'install-jquery-ui + (lambda* (#:key outputs inputs #:allow-other-keys) + (let ((dir (string-append (assoc-ref outputs "out") + "/lib/python3.7/site-packages/matplotlib/backends/web_backend/"))) + (mkdir-p dir) + (invoke "unzip" + (assoc-ref inputs "jquery-ui") + "-d" dir)) + #t)) + (replace 'check + (lambda* (#:key outputs inputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (invoke "python" "tests.py" "-v" + "-m" "not network and not webagg"))) + (add-before 'build 'configure-environment + (lambda* (#:key outputs inputs #:allow-other-keys) + (let ((cairo (assoc-ref inputs "cairo"))) + ;; Setting this directory in the 'basedirlist' of 'setup.cfg' + ;; has not effect. + (setenv "LD_LIBRARY_PATH" (string-append cairo "/lib")) + (setenv "HOME" (getcwd)) + (call-with-output-file "setup.cfg" + (lambda (port) + (format port "[directories]~% +basedirlist = ~a,~a~% +[packages]~% +tests = True~%" + (assoc-ref inputs "tcl") + (assoc-ref inputs "tk"))))) + #t))))) + (home-page "https://matplotlib.org/") + (synopsis "2D plotting library for Python") + (description + "Matplotlib is a Python 2D plotting library which produces publication +quality figures in a variety of hardcopy formats and interactive environments +across platforms. Matplotlib can be used in Python scripts, the python and +ipython shell, web application servers, and six graphical user interface +toolkits.") + (license license:psfl) + (properties `((python2-variant . ,(delay python2-matplotlib)))))) + +(define-public python2-matplotlib + (let ((matplotlib (package-with-python2 + (strip-python2-variant python-matplotlib)))) + (package (inherit matplotlib) + (version "2.2.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "matplotlib" version)) + (sha256 + (base32 + "09i1gnrra1590brc1f8d5rh2zvnknmfgzp613ab0462qkrwj15h2")))) + (arguments + (substitute-keyword-arguments (package-arguments matplotlib) + ((#:phases phases) + `(modify-phases ,phases + (replace 'install-jquery-ui + (lambda* (#:key outputs inputs #:allow-other-keys) + (let ((dir (string-append (assoc-ref outputs "out") + "/lib/python2.7/site-packages/" + "matplotlib/backends/web_backend/"))) + (mkdir-p dir) + (invoke "unzip" + (assoc-ref inputs "jquery-ui") + "-d" dir)) + #t)) + (delete 'fix-and-disable-failing-tests) + (delete 'check))))) ; These tests weren't run the the past. + ;; Make sure to use special packages for Python 2 instead + ;; of those automatically rewritten by package-with-python2. + (propagated-inputs + `(("python2-pycairo" ,python2-pycairo) + ("python2-backports-functools-lru-cache" + ,python2-backports-functools-lru-cache) + ("python2-functools32" ,python2-functools32) + ("python2-pygobject-2" ,python2-pygobject-2) + ("python2-subprocess32" ,python2-subprocess32) + ("python2-tkinter" ,python-2 "tk") + ,@(fold alist-delete (package-propagated-inputs matplotlib) + '("python-pycairo" "python-pygobject" "python-tkinter"))))))) + +(define-public python-matplotlib-documentation + (package + (name "python-matplotlib-documentation") + (version (package-version python-matplotlib)) + (source (package-source python-matplotlib)) + (build-system python-build-system) + (native-inputs + `(("python-matplotlib" ,python-matplotlib) + ("python-colorspacious" ,python-colorspacious) + ("python-sphinx" ,python-sphinx) + ("python-sphinx-copybutton" ,python-sphinx-copybutton) + ("python-sphinx-gallery" ,python-sphinx-gallery) + ("python-numpydoc" ,python-numpydoc) + ("python-ipython" ,python-ipython) + ("python-ipykernel" ,python-ipykernel) + ("python-mock" ,python-mock) + ("graphviz" ,graphviz) + ("texlive" ,(texlive-union (list texlive-amsfonts + texlive-latex-amsmath + texlive-latex-enumitem + texlive-latex-expdlist + texlive-latex-geometry + texlive-latex-preview + texlive-latex-type1cm + texlive-latex-ucs + + texlive-generic-pdftex + + texlive-fonts-ec + texlive-fonts-adobe-times + texlive-fonts-txfonts))) + ("texinfo" ,texinfo) + ,@(package-native-inputs python-matplotlib))) + (arguments + `(#:tests? #f ; we're only generating documentation + #:phases + (modify-phases %standard-phases + ;; The tests in python-matplotlib are run after the install phase, so + ;; we need to delete the extra phase here. + (delete 'check) + (replace 'build + (lambda _ + (chdir "doc") + (setenv "PYTHONPATH" + (string-append (getenv "PYTHONPATH") + ":" (getcwd) "/../examples/units")) + (substitute* "conf.py" + ;; Don't use git. + (("^SHA = check_output.*") + (string-append "SHA = \"" ,version "\"\n")) + ;; Don't fetch intersphinx files from the Internet + (("^explicit_order_folders" m) + (string-append "intersphinx_mapping = {}\n" m)) + (("'sphinx.ext.intersphinx',") "") + ;; Disable URL embedding which requires internet access. + (("'https://docs.scipy.org/doc/numpy'") "None") + (("'https://docs.scipy.org/doc/scipy/reference'") "None")) + (invoke "make" + "SPHINXBUILD=sphinx-build" + "SPHINXOPTS=" ; don't abort on warnings + "html" "texinfo"))) + (replace 'install + (lambda* (#:key inputs outputs #:allow-other-keys) + (let* ((data (string-append (assoc-ref outputs "out") "/share")) + (doc (string-append data "/doc/python-matplotlib-" ,version)) + (info (string-append data "/info")) + (html (string-append doc "/html"))) + (mkdir-p html) + (mkdir-p info) + (copy-recursively "build/html" html) + (symlink (string-append html "/_images") + (string-append info "/matplotlib-figures")) + (with-directory-excursion "build/texinfo" + (substitute* "matplotlib.texi" + (("@image\\{([^,]*)" all file) + (string-append "@image{matplotlib-figures/" file))) + (symlink (string-append html "/_images") + "./matplotlib-figures") + (invoke "makeinfo" "--no-split" + "-o" "matplotlib.info" "matplotlib.texi")) + (install-file "build/texinfo/matplotlib.info" info)) + #t))))) + (home-page (package-home-page python-matplotlib)) + (synopsis "Documentation for the python-matplotlib package") + (description (package-description python-matplotlib)) + (license (package-license python-matplotlib)))) + +(define-public python2-matplotlib-documentation + (let ((parent (package-with-python2 python-matplotlib-documentation))) + (package + (inherit parent) + (native-inputs + (alist-delete "python-sphinx-copybutton" + (package-native-inputs parent)))))) + +(define-public python-matplotlib-venn + (package + (name "python-matplotlib-venn") + (version "0.11.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "matplotlib-venn" version ".zip")) + (sha256 + (base32 + "13w3i1wih0mij08hrgppzg0g9z50y54rc28l6gdi1r5w45l7l0dy")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; tests are not included + (propagated-inputs + `(("python-matplotlib" ,python-matplotlib) + ("python-numpy" ,python-numpy) + ("python-scipy" ,python-scipy))) + (native-inputs + `(("unzip" ,unzip))) + (home-page "https://github.com/konstantint/matplotlib-venn") + (synopsis "Plot area-proportional Venn diagrams") + (description + "This package provides tools for plotting area-proportional two- and +three-way Venn diagrams in @code{matplotlib}.") + (license license:expat))) + +(define-public python-pysnptools + (package + (name "python-pysnptools") + (version "0.4.11") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pysnptools" version)) + (sha256 + (base32 + "0gxr0bjix307wvk0qh7vkafbxbzfpdmq0wlswpxyyaymy0fwcypv")))) + (build-system python-build-system) + (arguments + `(#:tests? #f ; no test data are included + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key inputs outputs tests? #:allow-other-keys) + (if tests? + (begin + (add-installed-pythonpath inputs outputs) + (invoke "python3" "pysnptools/test.py")) + #t)))))) + (propagated-inputs + `(("python-dill" ,python-dill) + ("python-h5py" ,python-h5py) + ("python-numpy" ,python-numpy) + ("python-pandas" ,python-pandas) + ("python-psutil" ,python-psutil) + ("python-scipy" ,python-scipy))) + (native-inputs + `(("python-cython" ,python-cython))) + (home-page "http://microsoftgenomics.github.io/PySnpTools/") + (synopsis "Library for reading and manipulating genetic data") + (description + "PySnpTools is a library for reading and manipulating genetic data. It +can, for example, efficiently read whole PLINK *.bed/bim/fam files or parts of +those files. It can also efficiently manipulate ranges of integers using set +operators such as union, intersection, and difference.") + (license license:asl2.0))) + +(define-public python2-pysnptools + (package-with-python2 python-pysnptools)) + +(define-public python-wurlitzer + (package + (name "python-wurlitzer") + (version "2.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "wurlitzer" version)) + (sha256 + (base32 "0hvmbc41kdwrjns8z1s4a59a4azdvzb8q3vs7nn1li4qm4l0g3yh")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest" "-vv" "test.py")))))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest))) + (home-page "https://github.com/minrk/wurlitzer") + (synopsis "Capture C-level output in context managers") + (description + "This library helps to redirect @code{sys.stdout} to a stream or a file +while executing some piece of code, including C code running within a Python +process.") + (license license:expat))) + +(define-public python-socksipy-branch + (package + (name "python-socksipy-branch") + (version "1.01") + (source + (origin + (method url-fetch) + (uri (pypi-uri "SocksiPy-branch" version)) + (sha256 + (base32 + "01l41v4g7fy9fzvinmjxy6zcbhgqaif8dhdqm4w90fwcw9h51a8p")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ; There are no tests + (home-page "https://code.google.com/archive/p/socksipy-branch/") + (synopsis "Python SOCKS module") + (description + "SocksiPy - A Python SOCKS client module. It provides a +socket-like interface that supports connections to any TCP +service through the use of a SOCKS4, SOCKS5 or HTTP proxy. +The original version was developed by Dan Haim, this is a +branch created by Mario Vilas to address some open issues, +as the original project seems to have been abandoned circa 2007.") + (license license:bsd-3))) + +(define-public python2-socksipy-branch + (package-with-python2 python-socksipy-branch)) + +(define-public python-socksipychain + (package + (name "python-socksipychain") + (version "2.1.2") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/pagekite/PySocksipyChain") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "02pp994qmiivkdx4y6az5q80l6rzy8g6d2ipvp7kns7lsxvmc2y7")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ; Tests try to access the network. + (home-page "http://pagekite.net/wiki/Floss/PySocksipyChain/") + (synopsis "Python SOCKS module with chained proxies support") + (description + "SocksiPyChain is a modified version of the SocksiPy SOCKS module, which +adds support for arbitrary chaining of proxy servers and various modes of +TLS/SSL encryption. It was developed for use in PageKite, and also includes +a simple netcat replacement with chaining support.") + (license license:bsd-3))) + +(define-public python-pycodestyle + (package + (name "python-pycodestyle") + (version "2.6.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pycodestyle" version)) + (sha256 + (base32 + "0bhr6ia0hmgx3nhgibc9pmkzhlh1zcqk707i5fbxgs702ll7v2n5")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest" "-vv")))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://pycodestyle.readthedocs.io/") + (synopsis "Python style guide checker") + (description "@code{pycodestyle} (formerly pep8) is a tool to check +Python code against some of the style conventions in +@url{http://www.python.org/dev/peps/pep-0008/,PEP 8}.") + (license license:expat))) + +(define-public python2-pycodestyle + (package-with-python2 python-pycodestyle)) + +(define-public python-multidict + (package + (name "python-multidict") + (version "4.7.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "multidict" version)) + (sha256 + (base32 + "07ikq2c72kd263hpldw55y0px2l3g34hjk66ml9lryh1jv287qmf")))) + (build-system python-build-system) + (arguments + '(#:modules ((ice-9 ftw) + (srfi srfi-1) + (srfi srfi-26) + (guix build utils) + (guix build python-build-system)) + #:phases (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (if tests? + (begin + (let ((libdir (find (cut string-prefix? "lib." <>) + (scandir "build")))) + (setenv "PYTHONPATH" + (string-append "./build/" libdir ":" + (getenv "PYTHONPATH"))) + (invoke "pytest" "-vv"))) + (format #t "test suite not run~%")) + #t))))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov))) + (home-page "https://github.com/aio-libs/multidict/") + (synopsis "Multidict implementation") + (description "Multidict is dict-like collection of key-value pairs +where key might be occurred more than once in the container.") + (license license:asl2.0))) + +(define-public python-orderedmultidict + (package + (name "python-orderedmultidict") + (version "1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "orderedmultidict" version)) + (sha256 + (base32 + "1idjbl933avgaadscrjw1np3xkvnz3phq0l8vw5qs0rqcjx9b65q")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-tests + (lambda _ + ;; The package uses nosetest for running the tests. + ;; Adding this initfile allows to run the test suite + ;; without requiring nosetest. + (with-output-to-file "tests/__init__.py" newline) + #t))))) + (propagated-inputs + `(("python-six" ,python-six))) + (native-inputs + `(("python-pycodestyle" ,python-pycodestyle))) + (home-page "https://github.com/gruns/orderedmultidict") + (synopsis "Python Ordered Multivalue Dictionary - omdict") + (description "This package contains a library for ordered multivalue +dictionaries. A multivalue dictionary is a dictionary that can store +multiple values for the same key. An ordered multivalue dictionary is a +multivalue dictionary that retains the order of insertions and deletions.") + (license license:unlicense))) + +(define-public python2-orderedmultidict + (package-with-python2 python-orderedmultidict)) + +(define-public python-autopep8 + (package + (name "python-autopep8") + (version "1.5.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "autopep8" version)) + (sha256 + (base32 + "1w6vh627vrmgfbvrdcxrc3k4gxcldrb2lpgxv9irkdds851qrzb0")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pycodestyle" ,python-pycodestyle) + ("python-toml" ,python-toml))) + (home-page "https://github.com/hhatto/autopep8") + (synopsis "Format Python code according to the PEP 8 style guide") + (description + "@code{autopep8} automatically formats Python code to conform to +the PEP 8 style guide. It uses the pycodestyle utility to determine +what parts of the code needs to be formatted. @code{autopep8} is +capable of fixing most of the formatting issues that can be reported +by pycodestyle.") + (license (license:non-copyleft + "https://github.com/hhatto/autopep8/blob/master/LICENSE")))) + +(define-public python2-autopep8 + (package-with-python2 python-autopep8)) + +(define-public python-distlib + (package + (name "python-distlib") + (version "0.3.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "distlib" version ".zip")) + (sha256 + (base32 + "08fyi2r246733vharl2yckw20rilci28r91mzrnnvcr638inw5if")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'build 'no-/bin/sh + (lambda _ + (substitute* '("distlib/scripts.py" "tests/test_scripts.py") + (("/bin/sh") (which "sh"))) + #t)) + (add-before 'check 'prepare-test-env + (lambda _ + (setenv "HOME" "/tmp") + ;; NOTE: Any value works, the variable just has to be present. + (setenv "SKIP_ONLINE" "1") + #t))))) + (native-inputs `(("unzip" ,unzip))) + (home-page "https://bitbucket.org/pypa/distlib") + (synopsis "Distribution utilities") + (description "Distlib is a library which implements low-level functions that +relate to packaging and distribution of Python software. It is intended to be +used as the basis for third-party packaging tools.") + (license license:psfl))) + +(define-public python-distutils-extra + (package + (name "python-distutils-extra") + (version "2.38") + (source + (origin + (method url-fetch) + (uri (string-append "https://launchpad.net/python-distutils-extra/trunk/" + version "/+download/python-distutils-extra-" + version ".tar.gz")) + (sha256 + (base32 + "0lx15kcbby9zisx33p2h5hgakgwh2bvh0ibag8z0px4j6ifhs41x")))) + (build-system python-build-system) + (home-page "https://launchpad.net/python-distutils-extra/") + (synopsis "Enhancements to Python's distutils") + (description + "The python-distutils-extra module enables you to easily integrate +gettext support, themed icons, and scrollkeeper-based documentation into +Python's distutils.") + (license license:gpl2))) + +(define-public python2-distutils-extra + (package-with-python2 python-distutils-extra)) + +(define-public python2-elib.intl + (package + (name "python2-elib.intl") + (version "0.0.3") + (source + (origin + ;; This project doesn't tag releases or publish tarballs, so we take + ;; source from a (semi-arbitrary, i.e. latest as of now) git commit. + (method git-fetch) + (uri (git-reference + (url "https://github.com/dieterv/elib.intl") + (commit "d09997cfef"))) + (file-name (string-append name "-" version "-checkout")) + (sha256 + (base32 + "0y7vzff9xgbnaay7m0va1arl6g68ncwrvbgwl7jqlclsahzzb09d")))) + (build-system python-build-system) + (arguments + ;; incompatible with Python 3 (exception syntax) + `(#:python ,python-2 + #:tests? #f)) + (home-page "https://github.com/dieterv/elib.intl") + (synopsis "Enhanced internationalization for Python") + (description + "The elib.intl module provides enhanced internationalization (I18N) +services for your Python modules and applications.") + (license license:lgpl3+))) + +(define-public python-olefile + (package + (name "python-olefile") + (version "0.46") + (source + (origin + (method url-fetch) + (uri (string-append "https://github.com/decalage2/olefile/releases/" + "download/v" version "/olefile-" version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1kjxh4gr651hpqkjfv89cfzr40hyvf3vjlda7mifiail83j7j07m")))) + (build-system python-build-system) + (home-page "https://www.decalage.info/python/olefileio") + (synopsis "Read and write Microsoft OLE2 files.") + (description + "@code{olefile} can parse, read and write Microsoft OLE2 files (Structured +Storage or Compound Document, Microsoft Office). It is an improved version of +the OleFileIO module from PIL, the Python Image Library.") + (license license:bsd-3))) + +(define-public python2-olefile + (package-with-python2 python-olefile)) + +(define-public python-pillow + (package + (name "python-pillow") + (version "6.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Pillow" version)) + (sha256 + (base32 + "1c8wkzc58f5wdh006jvmwdk3wxld1xgagcbdvj7iv17qi0m9fkmz")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (inputs + `(("freetype" ,freetype) + ("lcms" ,lcms) + ("libjpeg" ,libjpeg-turbo) + ("libtiff" ,libtiff) + ("libwebp" ,libwebp) + ("openjpeg" ,openjpeg) + ("zlib" ,zlib))) + (propagated-inputs + `(("python-olefile" ,python-olefile))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-ldconfig + (lambda _ + (substitute* "setup.py" + (("\\['/sbin/ldconfig', '-p'\\]") "['true']")))) + (replace 'check + (lambda* (#:key outputs inputs tests? #:allow-other-keys) + (if tests? + (begin + (setenv "HOME" (getcwd)) + ;; Make installed package available for running the tests. + (add-installed-pythonpath inputs outputs) + (invoke "python" "selftest.py" "--installed") + (invoke "python" "-m" "pytest" "-vv")) + #t)))))) + (home-page "https://python-pillow.org") + (synopsis "Fork of the Python Imaging Library") + (description + "The Python Imaging Library adds image processing capabilities to your +Python interpreter. This library provides extensive file format support, an +efficient internal representation, and fairly powerful image processing +capabilities. The core image library is designed for fast access to data +stored in a few basic pixel formats. It should provide a solid foundation for +a general image processing tool.") + (license (license:x11-style + "http://www.pythonware.com/products/pil/license.htm" + "The PIL Software License")))) + +(define-public python2-pillow + (package-with-python2 python-pillow)) + +(define-public python-pillow-2.9 + (package + (inherit python-pillow) + (version "2.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Pillow" version)) + (sha256 + (base32 + "0ada7lf3lmbdsqm3b7ja920p1pllyfhmqndr85ikpj77fmz9s5qg")))) + (arguments + (substitute-keyword-arguments (package-arguments python-pillow) + ((#:tests? _ #f) #f))) + (properties '((hidden? #t))))) + +(define-public python-roifile + (package + (name "python-roifile") + (version "2020.5.28") + (source + (origin + (method url-fetch) + (uri (pypi-uri "roifile" version)) + (sha256 + (base32 + "1vwbwfsw745gyqymff6dllc5zqjsgqmxaw245sw4an6yw9rcbzc0")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) ; there are none + (propagated-inputs + `(("python-numpy" ,python-numpy))) + (home-page "https://www.lfd.uci.edu/~gohlke/") + (synopsis "Read and write ImageJ ROI format") + (description "Roifile is a Python library to read, write, create, and plot +ImageJ ROIs, an undocumented and ImageJ application specific format to store +regions of interest, geometric shapes, paths, text, etc for image overlays.") + (license license:bsd-3))) + +(define-public python-tifffile + (package + (name "python-tifffile") + (version "2020.6.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "tifffile" version)) + (sha256 + (base32 + "0xv3ynkbrsibqvx7250075idb7wm3canjd6lx2nzf3cbp6l07577")))) + (build-system python-build-system) + ;; Tests require lfdfiles, which depends on tifffile + (arguments `(#:tests? #f)) + (propagated-inputs + `(("python-numpy" ,python-numpy) + ;;("python-lfdfiles" ,python-lfdfiles) + ("python-roifile" ,python-roifile))) + (home-page "https://www.lfd.uci.edu/~gohlke/") + (synopsis "Read and write TIFF(r) files") + (description "This package lets you read image and metadata from many +bio-scientific formats such as plain TIFF, BigTIFF, OME-TIFF, STK, LSM, SGI, +NIH, ImageJ, MicroManager, MD GEL, and FluoView files. It also lets you write +numpy arrays to TIFF, BigTIFF, and ImageJ hyperstack compatible files.") + (license license:bsd-3))) + +(define-public python-lfdfiles + (package + (name "python-lfdfiles") + (version "2020.1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "lfdfiles" version)) + (sha256 + (base32 + "1n9bkfn4vxl0lbhzd0m35lq86ayx5fwcj3ghpfl2vbjbsnfp3h47")))) + (build-system python-build-system) + (propagated-inputs + `(("python-click" ,python-click) + ("python-numpy" ,python-numpy) + ("python-tifffile" ,python-tifffile))) + (home-page "https://www.lfd.uci.edu/~gohlke/") + (synopsis "Work with LFD data files") + (description + "Lfdfiles is a Python library and console script for reading, writing, +converting, and viewing many of the proprietary file formats used to store +experimental data and metadata at the Laboratory for Fluorescence Dynamics.") + (license license:bsd-3))) + +(define-public python-imageio + (package + (name "python-imageio") + (version "2.8.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "imageio" version)) + (sha256 + (base32 + "1ksjl523fm0fikrd85llxfba35rc1qsgwadgr6mbn9kis79xcpzv")))) + (build-system python-build-system) + (arguments + `(#:tests? #f ; many tests require online data + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key outputs inputs tests? #:allow-other-keys) + (if tests? + (begin + ;; Make installed package available for running the tests. + (add-installed-pythonpath inputs outputs) + (invoke "pytest" "-vv")) + #t)))))) + (propagated-inputs + `(("python-numpy" ,python-numpy) + ("python-pillow" ,python-pillow) + ("python-psutil" ,python-psutil))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://imageio.github.io/") + (synopsis "Library for reading and writing a wide range of image data") + (description + "Imageio is a Python library that provides an easy interface to read and +write a wide range of image data, including animated images, video, volumetric +data, and scientific formats.") + (license license:bsd-2))) + +(define-public python-pycparser + (package + (name "python-pycparser") + (version "2.20") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pycparser" version)) + (sha256 + (base32 + "1w0m3xvlrzq4lkbvd1ngfm8mdw64r1yxy6n7djlw6qj5d0km6ird")))) + (outputs '("out" "doc")) + (build-system python-build-system) + (native-inputs + `(("pkg-config" ,pkg-config))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (with-directory-excursion "tests" + (invoke "python" "all_tests.py")) + #t)) + (add-after 'install 'install-doc + (lambda* (#:key outputs #:allow-other-keys) + (let* ((data (string-append (assoc-ref outputs "doc") "/share")) + (doc (string-append data "/doc/" ,name "-" ,version)) + (examples (string-append doc "/examples"))) + (mkdir-p examples) + (for-each (lambda (file) + (copy-file (string-append "." file) + (string-append doc file))) + '("/README.rst" "/CHANGES" "/LICENSE")) + (copy-recursively "examples" examples) + #t)))))) + (home-page "https://github.com/eliben/pycparser") + (synopsis "C parser in Python") + (description + "Pycparser is a complete parser of the C language, written in pure Python +using the PLY parsing library. It parses C code into an AST and can serve as +a front-end for C compilers or analysis tools.") + (license license:bsd-3))) + +(define-public python2-pycparser + (package-with-python2 python-pycparser)) + +(define-public python-pywavelets + (package + (name "python-pywavelets") + (version "1.1.1") + (home-page "https://github.com/PyWavelets/pywt") + (source (origin + (method url-fetch) + (uri (pypi-uri "PyWavelets" version)) + (sha256 + (base32 + "1j88c0r4j1d4mb3f8qhz6nalyx21qrzmsm70rjngnkybd87v8r0s")))) + (build-system python-build-system) + (arguments + '(#:modules ((ice-9 ftw) + (srfi srfi-1) + (srfi srfi-26) + (guix build utils) + (guix build python-build-system)) + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (let ((cwd (getcwd)) + (libdir (find (cut string-prefix? "lib." <>) + (scandir "build")))) + (with-directory-excursion (string-append cwd "/build/" libdir) + (invoke "pytest" "-vv")))))))) + (native-inputs + `(("python-matplotlib" ,python-matplotlib) ;for tests + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-numpy" ,python-numpy))) + (synopsis "Wavelet transforms in Python") + (description + "PyWavelets is a library for wavelet transforms in Python. Wavelets are +mathematical basis functions that are localized in both time and frequency. +Wavelet transforms are time-frequency transforms employing wavelets. They are +similar to Fourier transforms, the difference being that Fourier transforms are +localized only in frequency instead of in time and frequency.") + (license license:expat))) + +(define-public python-pywinrm + (package + (name "python-pywinrm") + (version "0.4.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pywinrm" version)) + (sha256 + (base32 + "10gabhhg3rgacd5ahmi2r128z99fzbrbx6mz1nnq0dxmhmn5rpjf")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six) + ("python-requests_ntlm" ,python-requests_ntlm) + ("python-xmltodict" ,python-xmltodict) + ("python-kerberos" ,python-kerberos))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest))) + (home-page "https://github.com/diyan/pywinrm/") + (synopsis + "Python library for Windows Remote Management (WinRM)") + (description + "pywinrm is a Python client for the Windows Remote Management (WinRM) +service. It allows you to invoke commands on target Windows machines from +any machine that can run Python.") + (license license:expat))) + +(define-public python-xcffib + (package + (name "python-xcffib") + (version "0.6.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "xcffib" version)) + (sha256 + (base32 + "04k91yxyb3pgc5lvxmivh8w71yjrap2g57yk3s73x4rm4nvjq51n")))) + (build-system python-build-system) + (inputs + `(("libxcb" ,libxcb))) + (propagated-inputs + `(("python-cffi" ,python-cffi) ; used at run time + ("python-six" ,python-six))) + (arguments + `(;; FIXME: Tests need more work. See ".travis.yml" in the repository. + #:tests? #f + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-libxcb-path + (lambda* (#:key inputs #:allow-other-keys) + (let ((libxcb (assoc-ref inputs "libxcb"))) + (substitute* '("xcffib/__init__.py") + (("^soname = \"") (string-append "soname = \"" libxcb "/lib/"))) + #t))) + (add-after 'install 'install-doc + (lambda* (#:key outputs #:allow-other-keys) + (let ((doc (string-append (assoc-ref outputs "out") "/share" + "/doc/" ,name "-" ,version))) + (mkdir-p doc) + (copy-file "README.md" + (string-append doc "/README.md")) + #t)))))) + (home-page "https://github.com/tych0/xcffib") + (synopsis "XCB Python bindings") + (description + "Xcffib is a replacement for xpyb, an XCB Python bindings. It adds +support for Python 3 and PyPy. It is based on cffi.") + (license license:expat))) + +(define-public python2-xcffib + (package-with-python2 python-xcffib)) + +(define-public python-cairocffi + (package + (name "python-cairocffi") + (version "0.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cairocffi" version)) + (sha256 + (base32 + "0dq3k4zhqd8cwsf3nyjqvjqm8wkvrjn1wjf44rl3v0h8kqx6qf0m")) + (patches (search-patches "python-cairocffi-dlopen-path.patch")))) + (build-system python-build-system) + (outputs '("out" "doc")) + (inputs + `(("glib" ,glib) + ("gtk+" ,gtk+) + ("gdk-pixbuf" ,gdk-pixbuf) + ("cairo" ,cairo) + ("pango" ,pango))) + (native-inputs + `(("pkg-config" ,pkg-config) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-runner" ,python-pytest-runner) + ("python-sphinx" ,python-sphinx) + ("python-docutils" ,python-docutils))) + (propagated-inputs + `(("python-xcffib" ,python-xcffib))) ; used at run time + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-paths + (lambda* (#:key inputs outputs #:allow-other-keys) + (substitute* (find-files "." "\\.py$") + (("dlopen\\(ffi, 'cairo'") + (string-append "dlopen(ffi, '" (assoc-ref inputs "cairo") + "/lib/libcairo.so.2'")) + (("dlopen\\(ffi, 'gdk-3'") + (string-append "dlopen(ffi, '" (assoc-ref inputs "gtk+") + "/lib/libgtk-3.so.0'")) + (("dlopen\\(ffi, 'gdk_pixbuf-2.0'") + (string-append "dlopen(ffi, '" (assoc-ref inputs "gdk-pixbuf") + "/lib/libgdk_pixbuf-2.0.so.0'")) + (("dlopen\\(ffi, 'glib-2.0'") + (string-append "dlopen(ffi, '" (assoc-ref inputs "glib") + "/lib/libglib-2.0.so.0'")) + (("dlopen\\(ffi, 'gobject-2.0'") + (string-append "dlopen(ffi, '" (assoc-ref inputs "glib") + "/lib/libgobject-2.0.so.0'")) + (("dlopen\\(ffi, 'pangocairo-1.0'") + (string-append "dlopen(ffi, '" (assoc-ref inputs "pango") + "/lib/libpangocairo-1.0.so.0'")) + (("dlopen\\(ffi, 'pango-1.0'") + (string-append "dlopen(ffi, '" (assoc-ref inputs "pango") + "/lib/libpango-1.0.so.0'"))) + #t)) + (add-after 'install 'install-doc + (lambda* (#:key inputs outputs #:allow-other-keys) + (let* ((data (string-append (assoc-ref outputs "doc") "/share")) + (doc (string-append data "/doc/" ,name "-" ,version)) + (html (string-append doc "/html"))) + (setenv "LD_LIBRARY_PATH" + (string-append (assoc-ref inputs "cairo") "/lib" ":" + (assoc-ref inputs "gdk-pixbuf") "/lib")) + (setenv "LANG" "en_US.UTF-8") + (mkdir-p html) + (for-each (lambda (file) + (copy-file (string-append "." file) + (string-append doc file))) + '("/README.rst" "/CHANGES" "/LICENSE")) + (system* "python" "setup.py" "build_sphinx") + (copy-recursively "docs/_build/html" html) + #t)))))) + (home-page "https://github.com/Kozea/cairocffi") + (synopsis "Python bindings and object-oriented API for Cairo") + (description + "Cairocffi is a CFFI-based drop-in replacement for Pycairo, a set of +Python bindings and object-oriented API for cairo. Cairo is a 2D vector +graphics library with support for multiple backends including image buffers, +PNG, PostScript, PDF, and SVG file output.") + (license license:bsd-3))) + +(define-public python2-cairocffi + (package-with-python2 python-cairocffi)) + +(define-public python-decorator + (package + (name "python-decorator") + (version "4.3.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "decorator" version)) + (sha256 + (base32 "0308djallnh00v112y5b7nadl657ysmkp6vc8xn51d6yzc9zm7n3")))) + (build-system python-build-system) + (home-page "https://pypi.org/project/decorator/") + (synopsis "Python module to simplify usage of decorators") + (description + "The aim of the decorator module is to simplify the usage of decorators +for the average programmer, and to popularize decorators usage giving examples +of useful decorators, such as memoize, tracing, redirecting_stdout, locked, +etc. The core of this module is a decorator factory.") + (license license:expat))) + +(define-public python2-decorator + (package-with-python2 python-decorator)) + +(define-public python-drmaa + (package + (name "python-drmaa") + (version "0.7.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "drmaa" version)) + (sha256 + (base32 "0xzqriqyvk5b8hszbavsyxd29wm3sxirm8zvvdm73rs2iq7w4hkx")))) + (build-system python-build-system) + ;; The test suite requires libdrmaa which is provided by the cluster + ;; environment. At runtime the environment variable DRMAA_LIBRARY_PATH + ;; should be set to the path of the libdrmaa library. + (arguments '(#:tests? #f)) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://pypi.org/project/drmaa/") + (synopsis "Python bindings for the DRMAA library") + (description + "A Python package for Distributed Resource Management (DRM) job +submission and control. This package is an implementation of the DRMAA 1.0 +Python language binding specification.") + (license license:bsd-3))) + +(define-public python2-drmaa + (package-with-python2 python-drmaa)) + +(define-public python-grako + (package + (name "python-grako") + (version "3.99.9") + (source + (origin + (method url-fetch) + (uri + (pypi-uri "grako" version ".zip")) + (sha256 + (base32 + "0r63i68wcnv63rfjkasq1ah81frz61a6mzbcnaxhrkdpx84p7hzw")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; Test file 'grako.ebnf' is missing from archive. + (native-inputs + `(("unzip" ,unzip) + ("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner))) + (home-page "https://bitbucket.org/neogeny/grako") + (synopsis "EBNF parser generator") + (description + "Grako takes a grammar in a variation of EBNF as input, and outputs a +memoizing PEG/Packrat parser in Python.") + (license license:bsd-3))) + +(define-public python2-grako + (package-with-python2 python-grako)) + +(define-public python-gridmap + (package + (name "python-gridmap") + (version "0.14.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/pygridtools/gridmap") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0v0sgpg6pz8h61f9aqjf5xk0ipr512bbz8dxzjjylksj135qr19l")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; FIXME: Requires python-cherrypy. + (propagated-inputs + `(("python-psutil" ,python-psutil) + ("python-drmaa" ,python-drmaa) + ("python-pyzmq" ,python-pyzmq))) + (home-page "https://github.com/pygridtools/gridmap") + (synopsis "Create jobs on a cluster directly from Python") + (description + "Gridmap is a Python package to allow you to easily create jobs on the +cluster directly from Python. You can directly map Python functions onto the +cluster without needing to write any wrapper code yourself.") + (license license:gpl3+))) + +(define-public python2-gridmap + (package-with-python2 python-gridmap)) + +(define-public python-honcho + (package + (name "python-honcho") + (version "1.0.1") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/nickstenning/honcho") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "11bd87474qpif20xdcn0ra1idj5k16ka51i658wfpxwc6nzsn92b")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-mock" ,python-mock) + ("python-tox" ,python-tox) + ("which" ,which))) ;for tests + (propagated-inputs + `(("python-jinja2" ,python-jinja2))) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'check) + (add-after 'install 'check + (lambda* (#:key outputs inputs #:allow-other-keys) + ;; fix honcho path in testsuite + (substitute* "tests/conftest.py" + (("'honcho'") (string-append "'" (assoc-ref outputs "out") + "/bin/honcho" "'"))) + ;; It's easier to run tests after install. + ;; Make installed package available for running the tests + (add-installed-pythonpath inputs outputs) + (invoke "py.test" "-v")))))) + (home-page "https://github.com/nickstenning/honcho") + (synopsis "Manage Procfile-based applications") + (description + "A Procfile is a file which describes how to run an application +consisting of several processes. honcho starts all listed processes. +The output of all running processes is collected by honcho and +displayed.") + (license license:expat))) + +(define-public python2-honcho + (package-with-python2 python-honcho)) + +(define-public python-pexpect + (package + (name "python-pexpect") + (version "4.8.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pexpect" version)) + (sha256 + (base32 "032cg337h8awydgypz6f4wx848lw8dyrj4zy988x0lyib4ws8rgw")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'prepare-tests + (lambda _ + (substitute* (find-files "tests") + (("/bin/ls") (which "ls")) + (("/bin/echo") (which "echo")) + (("/bin/which") (which "which")) + ;; Many tests try to use the /bin directory which + ;; is not present in the build environment. + ;; Use one that's non-empty and unlikely to change. + (("/bin'") "/dev'") + ;; Disable failing test. See upstream bug report + ;; https://github.com/pexpect/pexpect/issues/568 + (("def test_bash") "def _test_bash")) + ;; XXX: Socket connection test gets "Connection reset by peer". + ;; Why does it not work? Delete for now. + (delete-file "tests/test_socket.py") + #t)) + (replace 'check (lambda _ (invoke "nosetests" "-v")))))) + (native-inputs + `(("python-nose" ,python-nose) + ("python-pytest" ,python-pytest) + ("man-db" ,man-db) + ("which" ,which) + ("bash-full" ,bash))) ;full Bash for 'test_replwrap.py' + (propagated-inputs + `(("python-ptyprocess" ,python-ptyprocess))) + (home-page "http://pexpect.readthedocs.org/") + (synopsis "Controlling interactive console applications") + (description + "Pexpect is a pure Python module for spawning child applications; +controlling them; and responding to expected patterns in their output. +Pexpect works like Don Libes’ Expect. Pexpect allows your script to spawn a +child application and control it as if a human were typing commands.") + (license license:isc))) + +(define-public python2-pexpect + (package-with-python2 python-pexpect)) + +(define-public python-setuptools-scm + (package + (name "python-setuptools-scm") + (version "3.4.3") + (source (origin + (method url-fetch) + (uri (pypi-uri "setuptools_scm" version)) + (sha256 + (base32 + "083k93wi7mrmp1cn28hcbnr6sivbgls0y7zz2m5qzn1wg04a3f16")))) + (build-system python-build-system) + (home-page "https://github.com/pypa/setuptools_scm/") + (synopsis "Manage Python package versions in SCM metadata") + (description + "Setuptools_scm handles managing your Python package versions in +@dfn{software configuration management} (SCM) metadata instead of declaring +them as the version argument or in a SCM managed file.") + (license license:expat))) + +(define-public python2-setuptools-scm + (package-with-python2 python-setuptools-scm)) + +(define-public python-sexpdata + (package + (name "python-sexpdata") + (version "0.0.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "sexpdata" version)) + (sha256 + (base32 + "1q4lsjyzzqrdv64l0pv4ij9nd8gqhvxqcrpxc2xpxs652sk2gj0s")))) + (build-system python-build-system) + (home-page "https://github.com/jd-boyd/sexpdata") + (synopsis "S-expression parser for Python") + (description + "Sexpdata is an S-expression parser/serializer. It has load and dump +functions like pickle, json or PyYAML module.") + (license license:bsd-3))) + +(define-public python-pathlib2 + (package + (name "python-pathlib2") + (version "2.3.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pathlib2" version)) + (sha256 + (base32 + "0hpp92vqqgcd8h92msm9slv161b1q160igjwnkf2ag6cx0c96695")))) + (build-system python-build-system) + (propagated-inputs + `(("python-scandir" ,python-scandir) + ("python-six" ,python-six))) + (home-page "https://pypi.org/project/pathlib2/") + (synopsis "Object-oriented file system paths") + (description "The goal of pathlib2 is to provide a backport of the +standard @code{pathlib} module which tracks the standard library module, so +all the newest features of the standard @code{pathlib} can be used also on +older Python versions.") + (license license:expat))) + +(define-public python-importlib-resources + (package + (name "python-importlib-resources") + (version "3.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "importlib_resources" version)) + (sha256 + (base32 + "1hq626mx5jl9zfl0wdrjkxsnh8qd98fqv322n68b9251xjk4bxqr")))) + (build-system python-build-system) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm) + ("python-toml" ,python-toml))) + (home-page "http://importlib-resources.readthedocs.io/") + (synopsis "Read resources from Python packages") + (description + "@code{importlib_resources} is a backport of Python 3's standard library +@code{importlib.resources} module for Python 2.7, and Python 3.") + (properties `((python2-variant . ,(delay python2-importlib-resources)))) + (license license:asl2.0))) + +(define-public python2-importlib-resources + (package + (name "python2-importlib-resources") + (version "1.0.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "importlib_resources" version)) + (sha256 + (base32 + "0y3hg12iby1qyaspnbisz4s4vxax7syikk3skznwqizqyv89y9yk")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + #:phases (modify-phases %standard-phases + ;; The build system tests for python-wheel, but it is + ;; not required for Guix nor the test suite. Just drop + ;; it to make bootstrapping pytest easier. + (add-after 'unpack 'drop-wheel-dependency + (lambda _ + (substitute* "setup.cfg" + (("^[[:blank:]]+wheel") + "")) + #t))))) + (propagated-inputs + `(("python-pathlib2" ,python2-pathlib2) + ("python-typing" ,python2-typing))) + (home-page "https://gitlab.com/python-devs/importlib_resources") + (synopsis "Backport of @code{importlib.resources} from Python 3.7") + (description + "This package provides an implementation of @code{importlib.resources} +for older versions of Python.") + (license license:asl2.0))) + +;; For importlib-metadata-bootstrap below. +(define-public python2-importlib-resources-bootstrap + (hidden-package + (package/inherit + python2-importlib-resources + (name "python2-importlib-resources-bootstrap") + (propagated-inputs + `(("python-pathlib2-bootstrap" ,python2-pathlib2-bootstrap) + ("python-typing" ,python2-typing)))))) + +(define-public python-importlib-metadata + (package + (name "python-importlib-metadata") + (version "1.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "importlib_metadata" version)) + (sha256 + (base32 + "00ikdj4gjhankdljnz7g5ggak4k9lql2926x0x117ir9j2lv7x86")))) + (build-system python-build-system) + (propagated-inputs + `(("python-zipp" ,python-zipp))) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm) + ("python-pyfakefs" ,python-pyfakefs) + ("python-packaging" ,python-packaging))) + (home-page "https://importlib-metadata.readthedocs.io/") + (synopsis "Read metadata from Python packages") + (description + "@code{importlib_metadata} is a library which provides an API for +accessing an installed Python package's metadata, such as its entry points or +its top-level name. This functionality intends to replace most uses of +@code{pkg_resources} entry point API and metadata API. Along with +@code{importlib.resources} in Python 3.7 and newer, this can eliminate the +need to use the older and less efficient @code{pkg_resources} package.") + (properties `((python2-variant . ,(delay python2-importlib-metadata)))) + (license license:asl2.0))) + +(define-public python2-importlib-metadata + (let ((base (package-with-python2 (strip-python2-variant + python-importlib-metadata)))) + (package/inherit + base + (name "python2-importlib-metadata") + (native-inputs + `(("python-setuptools-scm" ,python2-setuptools-scm) + ("python-pyfakefs" ,python2-pyfakefs-bootstrap) + ("python-packaging" ,python2-packaging-bootstrap))) + (propagated-inputs + `(("python-configparser" ,python2-configparser) + ("python-contextlib2" ,python2-contextlib2) + ("python-importlib-resources" ,python2-importlib-resources) + ("python-pathlib2" ,python2-pathlib2) + ,@(package-propagated-inputs base)))))) + +;; This package is used by python2-pytest, and thus must not depend on it. +(define-public python2-importlib-metadata-bootstrap + (hidden-package + (package/inherit + python2-importlib-metadata + (name "python2-importlib-metadata-bootstrap") + (arguments + `(#:tests? #f + ,@(package-arguments python2-importlib-metadata))) + (propagated-inputs + `(("python-zipp" ,python2-zipp-bootstrap) + ("python-pathlib2" ,python2-pathlib2-bootstrap) + ("python-configparser" ,python2-configparser) + ("python-contextlib2" ,python2-contextlib2-bootstrap) + ("python-importlib-resources" ,python2-importlib-resources-bootstrap)))))) + +(define-public python-importmagic + (package + (name "python-importmagic") + (version "0.1.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "importmagic" version)) + (sha256 + (base32 + "1n7qxa1snj06aw45mcfz7bxc46zp7fxj687140g2k6jcnyjmfxrz")))) + (build-system python-build-system) + (home-page "https://github.com/alecthomas/importmagic") + (synopsis "Library for adding, removing and managing Python imports") + (description + "Importmagic is a Python library for automatically managing imports by +finding unresolved symbols in Python code and their corresponding imports.") + (license license:bsd-3))) + +(define-public python-jaraco-packaging + (package + (name "python-jaraco-packaging") + (version "6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jaraco.packaging" version)) + (sha256 + (base32 + "0zimrnkh33b9g8ffw11mjh6kvs54cy5gcjw1h5cl1r7dc833dmkm")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pytest" ,python-pytest) + ("python-pytest-checkdocs" ,python-pytest-checkdocs) + ("python-pytest-flake8" ,python-pytest-flake8) + ("python-rst.linker" ,python-rst.linker) + ("python-setuptools" ,python-setuptools) + ("python-setuptools-scm" ,python-setuptools-scm) + ("python-six" ,python-six) + ("python-sphinx" ,python-sphinx))) + (home-page "https://github.com/jaraco/jaraco.packaging") + (synopsis "Tools to supplement packaging Python releases") + (description + "This package provides various tools to supplement packaging Python +releases.") + (license license:expat))) + +(define-public python-pathpy + (package + (name "python-pathpy") + (version "11.5.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "path.py" version)) + (sha256 + (base32 "0ir9j1haq2jbi7aip6k2fa9l7q1l03k4hp1awxhjhcwzsnwp3ll8")))) + (outputs '("out" "doc")) + (build-system python-build-system) + (propagated-inputs + `(("python-appdirs" ,python-appdirs) + ("python-importlib-metadata" ,python-importlib-metadata))) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm) + ("python-sphinx" ,python-sphinx) + ("python-rst.linker" ,python-rst.linker) + ("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner) + ("python-jaraco-packaging" ,python-jaraco-packaging))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'build 'build-doc + (lambda _ + (setenv "LANG" "en_US.UTF-8") + (invoke "python" "setup.py" "build_sphinx"))) + (add-after 'install 'install-doc + (lambda* (#:key outputs #:allow-other-keys) + (let* ((data (string-append (assoc-ref outputs "doc") "/share")) + (doc (string-append data "/doc/" ,name "-" ,version)) + (html (string-append doc "/html"))) + (mkdir-p html) + (for-each (lambda (file) + (copy-file file (string-append doc "/" file))) + '("README.rst" "CHANGES.rst")) + (copy-recursively "build/sphinx/html" html) + #t))) + (replace 'check + (lambda _ + ;; The import time test aborts if an import takes longer than + ;; 100ms. It may very well take a little longer than that. + (invoke "pytest" "-v" "-k" "not test_import_time")))))) + (home-page "https://github.com/jaraco/path.py") + (synopsis "Python module wrapper for built-in os.path") + (description + "@code{path.py} implements path objects as first-class entities, allowing +common operations on files to be invoked on those path objects directly.") + (license license:expat))) + +(define-public python2-pathpy + (package-with-python2 python-pathpy)) + +(define-public python-simplegeneric + (package + (name "python-simplegeneric") + (version "0.8.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "simplegeneric" version ".zip")) + (sha256 + (base32 "0wwi1c6md4vkbcsfsf8dklf3vr4mcdj4mpxkanwgb6jb1432x5yw")))) + (build-system python-build-system) + (native-inputs + `(("unzip" ,unzip))) + (home-page "http://cheeseshop.python.org/pypi/simplegeneric") + (synopsis "Python module for simple generic functions") + (description + "The simplegeneric module lets you define simple single-dispatch generic +functions, akin to Python’s built-in generic functions like @code{len()}, +@code{iter()} and so on. However, instead of using specially-named methods, +these generic functions use simple lookup tables, akin to those used by +e.g. @code{pickle.dump()} and other generic functions found in the Python +standard library.") + (license license:zpl2.1))) + +(define-public python2-simplegeneric + (package-with-python2 python-simplegeneric)) + +(define-public python-ipython-genutils + ;; TODO: This package is retired, check if can be removed, see description. + (package + (name "python-ipython-genutils") + (version "0.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ipython_genutils" version)) + (sha256 + (base32 "19l2pp1c64ansr89l3cqh19jdi2ixhssdzx0vz4n6r52a6i281is")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) ; no tests + (home-page "https://ipython.org") + (synopsis "Vestigial utilities from IPython") + (description + "This package provides retired utilities from IPython. No packages +outside IPython/Jupyter should depend on it. + +This package shouldn't exist. It contains some common utilities shared by +Jupyter and IPython projects during The Big Split. As soon as possible, those +packages will remove their dependency on this, and this package will go +away.") + (license license:bsd-3))) + +(define-public python2-ipython-genutils + (package-with-python2 python-ipython-genutils)) + +(define-public python-ipyparallel + (package + (name "python-ipyparallel") + (version "6.2.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ipyparallel" version)) + (sha256 + (base32 + "0rf0dbpxf5z82bw8lsjj45r3wdd4wc74anz4wiiaf2rbjqlb1ivn")))) + (build-system python-build-system) + (arguments + `(#:tests? #f ; RuntimeError: IO Loop failed to start + #:phases + (modify-phases %standard-phases + (add-before 'check 'prepare-for-tests + (lambda _ + (setenv "HOME" (getcwd)) + #t))))) + (propagated-inputs + `(("python-dateutil" ,python-dateutil) + ("python-decorator" ,python-decorator) + ("python-ipykernel" ,python-ipykernel) + ("python-ipython" ,python-ipython) + ("python-ipython-genutils" ,python-ipython-genutils) + ("python-jupyter-client" ,python-jupyter-client) + ("python-pyzmq" ,python-pyzmq) + ("python-tornado" ,python-tornado) + ("python-traitlets" ,python-traitlets))) + (native-inputs + `(("python-ipython" ,python-ipython) + ("python-mock" ,python-mock) + ("python-nose" ,python-nose) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-testpath" ,python-testpath))) + (home-page "https://ipython.org/") + (synopsis "Interactive Parallel Computing with IPython") + (description + "@code{ipyparallel} is a Python package and collection of CLI scripts for +controlling clusters for Jupyter. @code{ipyparallel} contains the following +CLI scripts: +@enumerate +@item ipcluster - start/stop a cluster +@item ipcontroller - start a scheduler +@item ipengine - start an engine +@end enumerate") + (license license:bsd-3))) + +(define-public python2-ipyparallel + (let ((ipyparallel (package-with-python2 python-ipyparallel))) + (package + (inherit ipyparallel) + (propagated-inputs + `(("python2-futures" ,python2-futures) + ,@(package-propagated-inputs ipyparallel)))))) + +(define-public python-ipython-cluster-helper + (package + (name "python-ipython-cluster-helper") + (version "0.6.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ipython-cluster-helper" version)) + (sha256 + (base32 + "1l6mlwxlkxpbvawfwk6qffich7ahg9hq2bxfissgz6144p3k4arj")) + (modules '((guix build utils))) + (snippet + '(begin (substitute* "requirements.txt" + (("ipython.*") "ipython\n")) + #t)))) + (build-system python-build-system) + (arguments + `(#:tests? #f ; Test suite can't find IPython. + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key inputs outputs tests? #:allow-other-keys) + (if tests? + (begin + (setenv "HOME" (getcwd)) + (add-installed-pythonpath inputs outputs) + (invoke "python" "example/example.py" "--local")) + #t)))))) + (propagated-inputs + `(("python-ipyparallel" ,python-ipyparallel) + ("python-ipython" ,python-ipython) + ("python-netifaces" ,python-netifaces) + ("python-pyzmq" ,python-pyzmq) + ("python-setuptools" ,python-setuptools) + ("python-six" ,python-six))) + (home-page "https://github.com/roryk/ipython-cluster-helper") + (synopsis + "Simplify IPython cluster start up and use for multiple schedulers") + (description + "@code{ipython-cluster-helper} creates a throwaway parallel IPython +profile, launches a cluster and returns a view. On program exit it shuts the +cluster down and deletes the throwaway profile.") + (license license:expat))) + +(define-public python2-ipython-cluster-helper + (package-with-python2 python-ipython-cluster-helper)) + +(define-public python-traitlets + (package + (name "python-traitlets") + (version "4.3.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "traitlets" version)) + (sha256 + (base32 + "1xsrwgivpkxlbr4dfndfsi098s29yqgswgjc1qqn69yxklvfw8yh")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check (lambda _ (invoke "pytest" "-vv" "traitlets")))))) + (propagated-inputs + `(("python-ipython-genutils" ,python-ipython-genutils) + ("python-decorator" ,python-decorator))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (properties `((python2-variant . ,(delay python2-traitlets)))) + (home-page "https://ipython.org") + (synopsis "Configuration system for Python applications") + (description + "Traitlets is a framework that lets Python classes have attributes with +type checking, dynamically calculated default values, and ‘on change’ +callbacks. The package also includes a mechanism to use traitlets for +configuration, loading values from files or from command line arguments. This +is a distinct layer on top of traitlets, so you can use traitlets in your code +without using the configuration machinery.") + (license license:bsd-3))) + +(define-public python2-traitlets + (let ((traitlets (package-with-python2 (strip-python2-variant python-traitlets)))) + (package + (inherit traitlets) + (propagated-inputs + `(("python2-enum34" ,python2-enum34) + ,@(package-propagated-inputs traitlets)))))) + +(define-public python-jupyter-core + (package + (name "python-jupyter-core") + (version "4.4.0") + (source + (origin + (method url-fetch) + (uri (string-append (pypi-uri "jupyter_core" version))) + (sha256 + (base32 + "1dy083rarba8prn9f9srxq3c7n7vyql02ycrqq306c40lr57aw5s")))) + (build-system python-build-system) + ;; FIXME: not sure how to run the tests + (arguments `(#:tests? #f)) + (propagated-inputs + `(("python-traitlets" ,python-traitlets))) + (home-page "http://jupyter.org/") + (synopsis "Jupyter base package") + (description + "Jupyter core is the base package on which Jupyter projects rely.") + (license license:bsd-3))) + +(define-public python2-jupyter-core + (package-with-python2 python-jupyter-core)) + +(define-public python-jupyter-client + (package + (name "python-jupyter-client") + (version "5.2.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jupyter_client" version)) + (sha256 + (base32 + "0l9mh7ccrpl3lppym3dnky8n1nk7xarzzdcxf4q2s7aw203cpydm")))) + (build-system python-build-system) + ;; Tests fail because of missing native python kernel which I assume is + ;; provided by the ipython package, which we cannot use because it would + ;; cause a dependency cycle. + (arguments + `(#:tests? #f + + #:phases (modify-phases %standard-phases + (add-after 'unpack 'set-tool-file-names + (lambda* (#:key inputs #:allow-other-keys) + (let ((iproute (assoc-ref inputs "iproute"))) + (substitute* "jupyter_client/localinterfaces.py" + (("'ip'") + (string-append "'" iproute "/sbin/ip'"))) + #t)))))) + (inputs + `(("iproute" ,iproute))) + (propagated-inputs + `(("python-pyzmq" ,python-pyzmq) + ("python-traitlets" ,python-traitlets) + ("python-jupyter-core" ,python-jupyter-core))) + (home-page "http://jupyter.org/") + (synopsis "Jupyter protocol implementation and client libraries") + (description + "The @code{jupyter_client} package contains the reference implementation +of the Jupyter protocol. It also provides client and kernel management APIs +for working with kernels, and the @code{jupyter kernelspec} entrypoint for +installing @code{kernelspec}s for use with Jupyter frontends.") + (license license:bsd-3))) + +(define-public python2-jupyter-client + (package-with-python2 python-jupyter-client)) + +(define-public python-ipykernel + (package + (name "python-ipykernel") + (version "5.1.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ipykernel" version)) + (sha256 + (base32 "1a08y677lpn80qzvv7z0smgggmr5m5ayf0bs6vds47xpxl9sss5k")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (setenv "HOME" "/tmp") + (invoke "pytest" "-v") + #t)) + (add-after 'install 'set-python-file-name + (lambda* (#:key outputs #:allow-other-keys) + ;; Record the absolute file name of the 'python' executable in + ;; 'kernel.json'. + (let ((out (assoc-ref outputs "out"))) + (substitute* (string-append out "/share/jupyter" + "/kernels/python3/kernel.json") + (("\"python\"") + (string-append "\"" (which "python") "\""))) + #t)))))) + (propagated-inputs + `(("python-ipython" ,python-ipython) + ;; imported at runtime during connect + ("python-jupyter-client" ,python-jupyter-client))) + (native-inputs + `(("python-flaky" ,python-flaky) + ("python-nose" ,python-nose) + ("python-pytest" ,python-pytest))) + (home-page "https://ipython.org") + (synopsis "IPython Kernel for Jupyter") + (description + "This package provides the IPython kernel for Jupyter.") + (properties `((python2-variant . ,(delay python2-ipykernel)))) + (license license:bsd-3))) + +;; Version 5.x and above no longer support Python 2. +(define-public python2-ipykernel + (package + (name "python2-ipykernel") + (version "4.10.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ipykernel" version)) + (sha256 + (base32 "1yzmdiy1djsszqp54jzd8ym8h4hpl67zjq83j2kxbkp0rwmlpdzf")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (propagated-inputs + `(("python2-ipython" ,python2-ipython) + ;; imported at runtime during connect + ("python2-jupyter-client" ,python2-jupyter-client) + ("python2-tornado" ,python2-tornado) + ("python2-traitlets" ,python2-traitlets))) + (native-inputs + `(("python2-mock" ,python2-mock) + ("python2-nose" ,python2-nose) + ("python2-pytest" ,python2-pytest) + ("python2-pytest-cov" ,python2-pytest-cov))) + (home-page "https://ipython.org") + (synopsis "IPython Kernel for Jupyter") + (description + "This package provides the IPython kernel for Jupyter.") + (license license:bsd-3))) + +(define-public python-pari-jupyter + (package + (name "python-pari-jupyter") + (version "1.3.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pari_jupyter" version)) + (sha256 + (base32 + "1yash0p422nnin7z58b99d0p23nx79f5m0mainc9hsjg72jhdhr6")))) + (build-system python-build-system) + (propagated-inputs + `(("python-ipykernel" ,python-ipykernel))) + (inputs + `(("pari-gp" ,pari-gp) + ("readline" ,readline))) + (arguments + `(#:tests? #f)) ; no test suite + (home-page + "https://github.com/jdemeyer/pari_jupyter") + (synopsis "A Jupyter kernel for PARI/GP") + (description "The package provides a PARI/GP kernel for Jupyter.") + (license license:gpl3+))) + +(define-public python-backcall + (package + (name "python-backcall") + (version "0.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "backcall" version)) + (sha256 + (base32 + "1r01dqch3f8fdj3n6fviw8hxqrs6w5v0qw4izmvqzry1w9dxiv1q")))) + (build-system python-build-system) + (home-page "https://github.com/takluyver/backcall/") + (synopsis "Specifications for callback functions passed in to an API") + (description + "If your code lets other people supply callback functions, it's important +to specify the function signature you expect, and check that functions support +that. Adding extra parameters later would break other peoples code unless +you're careful. The @code{backcall} package provides a way of specifying the +callback signature using a prototype function.") + (license license:bsd-3))) + +(define-public python-ipython + (package + (name "python-ipython") + (version "7.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ipython" version ".tar.gz")) + (sha256 + (base32 "103jkw18z7fnwdal1mdbijjxi1fndzn31g887lmj7ddpf2r07lyz")))) + (build-system python-build-system) + (propagated-inputs + `(("python-backcall" ,python-backcall) + ("python-pyzmq" ,python-pyzmq) + ("python-prompt-toolkit" ,python-prompt-toolkit-2) + ("python-terminado" ,python-terminado) + ("python-matplotlib" ,python-matplotlib) + ("python-numpy" ,python-numpy) + ("python-numpydoc" ,python-numpydoc) + ("python-jedi" ,python-jedi) + ("python-jinja2" ,python-jinja2) + ("python-mistune" ,python-mistune) + ("python-pexpect" ,python-pexpect) + ("python-pickleshare" ,python-pickleshare) + ("python-simplegeneric" ,python-simplegeneric) + ("python-jsonschema" ,python-jsonschema) + ("python-traitlets" ,python-traitlets) + ("python-nbformat" ,python-nbformat) + ("python-pygments" ,python-pygments))) + (inputs + `(("readline" ,readline) + ("which" ,which))) + (native-inputs + `(("graphviz" ,graphviz) + ("pkg-config" ,pkg-config) + ("python-requests" ,python-requests) ;; for tests + ("python-testpath" ,python-testpath) + ("python-nose" ,python-nose))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'make-docs-reproducible + (lambda _ + (substitute* "IPython/sphinxext/ipython_directive.py" + ((".*import datetime") "") + ((".*datetime.datetime.now\\(\\)") "") + (("%timeit") "# %timeit")) + #t)) + ;; Tests can only be run after the library has been installed and not + ;; within the source directory. + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs tests? #:allow-other-keys) + (if tests? + (begin + ;; Make installed package available for running the tests + (add-installed-pythonpath inputs outputs) + (setenv "HOME" "/tmp/") ;; required by a test + ;; We only test the core because one of the other tests + ;; tries to import ipykernel. + (invoke "python" "IPython/testing/iptest.py" + "-v" "IPython/core/tests")) + #t))) + (add-before 'check 'fix-tests + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "./IPython/utils/_process_posix.py" + (("/usr/bin/env', 'which") (which "which"))) + (substitute* "./IPython/core/tests/test_inputtransformer.py" + (("#!/usr/bin/env python") + (string-append "#!" (which "python")))) + ;; This test introduces a circular dependency on ipykernel + ;; (which depends on ipython). + (delete-file "IPython/core/tests/test_display.py") + ;; AttributeError: module 'IPython.core' has no attribute 'formatters' + (delete-file "IPython/core/tests/test_interactiveshell.py") + #t))))) + (home-page "https://ipython.org") + (synopsis "IPython is a tool for interactive computing in Python") + (description + "IPython provides a rich architecture for interactive computing with: +Powerful interactive shells, a browser-based notebook, support for interactive +data visualization, embeddable interpreters and tools for parallel +computing.") + (properties `((python2-variant . ,(delay python2-ipython)))) + (license license:bsd-3))) + +;; This is the latest release of the LTS version of ipython with support for +;; Python 2.7 and Python 3.x. Later non-LTS versions starting from 6.0 have +;; dropped support for Python 2.7. +(define-public python2-ipython + (package + (name "python2-ipython") + (version "5.8.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ipython" version ".tar.gz")) + (sha256 + (base32 "01l93i4hspf0lvhmycvc8j378bslm9rw30mwfspsl6v1ayc69b2b")))) + (build-system python-build-system) + (propagated-inputs + `(("python2-backports-shutil-get-terminal-size" + ,python2-backports-shutil-get-terminal-size) + ("python2-pathlib2" ,python2-pathlib2) + ("python2-pyzmq" ,python2-pyzmq) + ("python2-prompt-toolkit" ,python2-prompt-toolkit-1) + ("python2-terminado" ,python2-terminado) + ("python2-matplotlib" ,python2-matplotlib) + ("python2-numpy" ,python2-numpy) + ("python2-numpydoc" ,python2-numpydoc) + ("python2-jinja2" ,python2-jinja2) + ("python2-mistune" ,python2-mistune) + ("python2-pexpect" ,python2-pexpect) + ("python2-pickleshare" ,python2-pickleshare) + ("python2-simplegeneric" ,python2-simplegeneric) + ("python2-jsonschema" ,python2-jsonschema) + ("python2-traitlets" ,python2-traitlets) + ("python2-nbformat" ,python2-nbformat) + ("python2-pygments" ,python2-pygments))) + (inputs + `(("readline" ,readline) + ("which" ,which))) + (native-inputs + `(("graphviz" ,graphviz) + ("pkg-config" ,pkg-config) + ("python2-requests" ,python2-requests) ;; for tests + ("python2-testpath" ,python2-testpath) + ("python2-mock" ,python2-mock) + ("python2-nose" ,python2-nose))) + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + (add-before 'check 'delete-broken-tests + (lambda* (#:key inputs #:allow-other-keys) + ;; These tests throw errors for unknown reasons. + (delete-file "IPython/core/tests/test_displayhook.py") + (delete-file "IPython/core/tests/test_magic_terminal.py") + (delete-file "IPython/core/tests/test_profile.py") + #t))))) + (home-page "https://ipython.org") + (synopsis "IPython is a tool for interactive computing in Python") + (description + "IPython provides a rich architecture for interactive computing with: +Powerful interactive shells, a browser-based notebook, support for interactive +data visualization, embeddable interpreters and tools for parallel +computing.") + (license license:bsd-3))) + +(define-public python-ipython-documentation + (package + (inherit python-ipython) + (name "python-ipython-documentation") + (version (package-version python-ipython)) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'build) + (delete 'check) + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (let* ((data (string-append (assoc-ref outputs "out") "/share")) + (doc (string-append data "/doc/" ,name "-" ,version)) + (html (string-append doc "/html")) + (man1 (string-append data "/man/man1")) + (info (string-append data "/info")) + (examples (string-append doc "/examples")) + (python-arg (string-append "PYTHON=" (which "python")))) + (setenv "LANG" "en_US.utf8") + (with-directory-excursion "docs" + ;; FIXME: pdf fails to build + ;;(system* "make" "pdf" "PAPER=a4") + (system* "make" python-arg "html") + ;; FIXME: the generated texi file contains ^@^@, which trips + ;; up the parser. + ;; (system* "make" python-arg "info") + ) + (copy-recursively "docs/man" man1) + (copy-recursively "examples" examples) + (copy-recursively "docs/build/html" html) + ;; (copy-file "docs/build/latex/ipython.pdf" + ;; (string-append doc "/ipython.pdf")) + (mkdir-p info) + ;; (copy-file "docs/build/texinfo/ipython.info" + ;; (string-append info "/ipython.info")) + (copy-file "COPYING.rst" (string-append doc "/COPYING.rst"))) + #t))))) + (inputs + `(("python-ipython" ,python-ipython) + ("python-ipykernel" ,python-ipykernel))) + (native-inputs + `(("python-sphinx" ,python-sphinx) + ("python-sphinx-rtd-theme" ,python-sphinx-rtd-theme) + ;; FIXME: It's possible that a smaller union would work just as well. + ("texlive" ,(texlive-union (list texlive-amsfonts + texlive-fonts-ec + texlive-generic-ifxetex + texlive-generic-pdftex + texlive-latex-capt-of + texlive-latex-cmap + texlive-latex-environ + texlive-latex-eqparbox + texlive-latex-etoolbox + texlive-latex-expdlist + texlive-latex-fancyhdr + texlive-latex-fancyvrb + texlive-latex-fncychap + texlive-latex-float + texlive-latex-framed + texlive-latex-geometry + texlive-latex-graphics + texlive-latex-hyperref + texlive-latex-mdwtools + texlive-latex-multirow + texlive-latex-needspace + texlive-latex-oberdiek + texlive-latex-parskip + texlive-latex-preview + texlive-latex-tabulary + texlive-latex-threeparttable + texlive-latex-titlesec + texlive-latex-trimspaces + texlive-latex-ucs + texlive-latex-upquote + texlive-latex-url + texlive-latex-varwidth + texlive-latex-wrapfig))) + ("texinfo" ,texinfo))))) + +(define-public python-urwid + (package + (name "python-urwid") + (version "2.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "urwid" version)) + (sha256 + (base32 + "11ndnhxd41m13darf5s0c6bafdpkzq1l6mfb04wbzdmyc1hg75h8")))) + (build-system python-build-system) + (home-page "http://urwid.org") + (synopsis "Console user interface library for Python") + (description + "Urwid is a curses-based UI/widget library for Python. It includes many +features useful for text console applications.") + (license license:lgpl2.1+))) + +(define-public python2-urwid + (package-with-python2 python-urwid)) + +(define-public python-urwidtrees + (package + (name "python-urwidtrees") + (version "1.0.2") + (source + (origin + (method git-fetch) + ;; package author intends on distributing via github rather than pypi: + ;; https://github.com/pazz/alot/issues/877#issuecomment-230173331 + (uri (git-reference + (url "https://github.com/pazz/urwidtrees") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1n1kpidvkdnsqyb82vlvk78gmly96kh8351lqxn2pzgwwns6fml2")))) + (build-system python-build-system) + (arguments + '(#:use-setuptools? #f + #:tests? #f)) ; no tests + (propagated-inputs `(("python-urwid" ,python-urwid))) + (home-page "https://github.com/pazz/urwidtrees") + (synopsis "Tree widgets for urwid") + (description "Urwidtrees is a Widget Container API for the @code{urwid} +toolkit. Use it to build trees of widgets.") + (license license:gpl3+))) + +(define-public python2-urwidtrees + (package-with-python2 python-urwidtrees)) + +(define-public python-ua-parser + (package + (name "python-ua-parser") + (version "0.8.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ua-parser" version)) + (sha256 + (base32 + "1jwdf58rhchjzzrad405pviv0iq24xa2xmmmdgcm2c8s6b4wzfwp")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ;no test suite in release + (native-inputs + `(("python-pyyaml" ,python-pyyaml))) + (home-page "https://github.com/ua-parser/uap-python") + (synopsis "User agent parser") + (description + "@code{ua-parser} is a Python port of Browserscope's user agent parser.") + (license license:asl2.0))) + +(define-public python2-ua-parser + (package-with-python2 python-ua-parser)) + +(define-public python-user-agents + (package + (name "python-user-agents") + (version "1.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "user-agents" version)) + (sha256 + (base32 + "0fc00cd3j8dahq1zzn8pkgfgd7lq37bp2scmdma2n1c049vicgb4")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ;missing devices.json test file in release + (propagated-inputs + `(("python-ua-parser" ,python-ua-parser))) + (home-page "https://github.com/selwin/python-user-agents") + (synopsis "User Agent strings parsing library") + (description + "A library to identify devices (phones, tablets) and their capabilities by +parsing (browser/HTTP) user agent strings.") + (license license:expat))) + +(define-public python2-user-agents + (package-with-python2 python-user-agents)) + +(define-public python-dbus + (package + (name "python-dbus") + (version "1.2.16") + (source + (origin + (method url-fetch) + (uri (string-append "https://dbus.freedesktop.org/releases/dbus-python/" + "dbus-python-" version ".tar.gz")) + (sha256 + (base32 "196m5rk3qzw5nkmgzjl7wmq0v7vpwfhh8bz2sapdi5f9hqfqy8qi")))) + (build-system gnu-build-system) + (native-inputs + `(("pkg-config" ,pkg-config))) + (inputs + `(("python" ,python-wrapper) + ("dbus-glib" ,dbus-glib))) + (synopsis "Python bindings for D-bus") + (description "python-dbus provides bindings for libdbus, the reference +implementation of D-Bus.") + (home-page "https://www.freedesktop.org/wiki/Software/DBusBindings/") + (license license:expat))) + +(define-public python2-dbus + (package (inherit python-dbus) + (name "python2-dbus") + (inputs `(("python" ,python-2) + ,@(alist-delete "python" + (package-inputs python-dbus) + equal?))))) + +(define-public python-notify2 + (package + (name "python-notify2") + (version "0.3.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "notify2" version)) + (sha256 + (base32 + "0z8rrv9rsg1r2qgh2dxj3dfj5xnki98kgi3w839kqby4a26i1yik")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) ; tests depend on system state + (native-inputs + `(("python-dbus" ,python-dbus))) + (home-page "https://bitbucket.org/takluyver/pynotify2") + (synopsis "Python interface to D-Bus notifications") + (description + "Pynotify2 provides a Python interface for sending D-Bus notifications. +It is a reimplementation of pynotify in pure Python, and an alternative to +the GObject Introspection bindings to libnotify for non-GTK applications.") + (license (list license:bsd-2 + license:lgpl2.1+)))) + +(define-public python2-notify2 + (package-with-python2 python-notify2)) + +;; beautifulsoup4 has a totally different namespace than 3.x, +;; and pypi seems to put it under its own name, so I guess we should too +(define-public python-beautifulsoup4 + (package + (name "python-beautifulsoup4") + (version "4.9.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "beautifulsoup4" version)) + (sha256 + (base32 + "1mvzlw3pzbhsvl3z8784s5h7iiflm2hggiy1fxyrrxwnbc8lvk3k")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; The Python 2 source is the definitive source of beautifulsoup4. We + ;; must use this conversion script when building with Python 3. The + ;; conversion script also runs the tests. + ;; For more information, see the file 'convert-py3k' in the source + ;; distribution. + (replace 'check + (lambda _ (invoke "./convert-py3k")))))) + (propagated-inputs + `(("python-soupsieve" ,python-soupsieve))) + (home-page + "https://www.crummy.com/software/BeautifulSoup/bs4/") + (synopsis + "Python screen-scraping library") + (description + "Beautiful Soup is a Python library designed for rapidly setting up +screen-scraping projects. It offers Pythonic idioms for navigating, +searching, and modifying a parse tree, providing a toolkit for +dissecting a document and extracting what you need. It automatically +converts incoming documents to Unicode and outgoing documents to UTF-8.") + (license license:expat) + (properties `((python2-variant . ,(delay python2-beautifulsoup4)))))) + +(define-public python2-beautifulsoup4 + (package + (inherit (package-with-python2 + (strip-python2-variant python-beautifulsoup4))) + (arguments `(#:python ,python-2)))) + +(define-public python-soupsieve + (package + (name "python-soupsieve") + (version "2.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "soupsieve" version)) + (sha256 + (base32 + "0ch2rhvsbwfpvzm4kzy81rclbzr533yv83hzg1gx55byfa0w37d5")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) + ;;XXX: 2 tests fail currently despite claming they were to be + ;;skipped. Also, beautifulsoup4 may depend on this in the future, so we + ;;don't want to create a circular dependency. + (home-page "https://github.com/facelessuser/soupsieve") + (synopsis "CSS selector library") + (description + "Soup Sieve is a CSS selector library designed to be used with Beautiful +Soup 4. It aims to provide selecting, matching, and filtering using modern +CSS selectors. Soup Sieve currently provides selectors from the CSS level 1 +specifications up through the latest CSS level 4 drafts and beyond (though +some are not yet implemented).") + (properties `((python2-variant . ,(delay python2-soupsieve)))) + (license license:expat))) + +;; This is the last version that supports python-2 +(define-public python2-soupsieve + (let ((base (package-with-python2 (strip-python2-variant python-soupsieve)))) + (package + (inherit base) + (version "1.9.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "soupsieve" version)) + (sha256 + (base32 + "1apgqxngi1216h1cyvrvj9gy3wf45mh1lz4n76j26jf3k36bm1br")))) + (propagated-inputs + `(("python2-backports-functools-lru-cache" + ,python2-backports-functools-lru-cache) + ,@(package-propagated-inputs base)))))) + +(define-public python-netifaces + (package + (name "python-netifaces") + (version "0.10.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri "netifaces" version)) + (sha256 + (base32 + "1wxby874kcr3pp4ygzk5aiarbzhg1yi093d56s1qg4k2s7yrzvid")))) + (build-system python-build-system) + (home-page "https://github.com/al45tair/netifaces") + (synopsis + "Python module for portable network interface information") + (description + "Netifaces is a Python module providing information on network +interfaces in an easy and portable manner.") + (license license:expat))) + +(define-public python2-netifaces + (package-with-python2 python-netifaces)) + +(define-public python-networkx + (package + (name "python-networkx") + (version "2.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "networkx" version)) + (sha256 + (base32 "0r2wr7aqay9fwjrgk35fkjzk8lvvb4i4df7ndaqzkr4ndw5zzx7q")))) + (build-system python-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (if tests? + (invoke "pytest" "-vv" "--pyargs" "networkx") + (format #t "test suite not run~%")) + #t))))) + ;; python-decorator is needed at runtime. + (propagated-inputs + `(("python-decorator" ,python-decorator))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://networkx.github.io/") + (synopsis "Python module for creating and manipulating graphs and networks") + (description + "NetworkX is a Python package for the creation, manipulation, and study +of the structure, dynamics, and functions of complex networks.") + (properties `((python2-variant . ,(delay python2-networkx)))) + (license license:bsd-3))) + +;; NetworkX 2.2 is the last version with support for Python 2. +(define-public python2-networkx + (let ((base (package-with-python2 (strip-python2-variant python-networkx)))) + (package + (inherit base) + (version "2.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "networkx" version ".zip")) + (sha256 + (base32 + "12swxb15299v9vqjsq4z8rgh5sdhvpx497xwnhpnb0gynrx6zra5")))) + (arguments + `(#:python ,python-2)) + (native-inputs + `(("python-nose" ,python2-nose) + ("unzip" ,unzip)))))) + +(define-public python-datrie + (package + (name "python-datrie") + (version "0.8.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "datrie" version)) + (sha256 + (base32 + "0pbn32flkrpjiwfcknmj6398qa81ba783kbcvwan3kym73v0hnsj")))) + (build-system python-build-system) + (native-inputs + `(("python-cython" ,python-cython) + ("python-hypothesis" ,python-hypothesis) + ("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner))) + (home-page "https://github.com/kmike/datrie") + (synopsis "Fast, efficiently stored trie for Python") + (description + "This package provides a fast, efficiently stored trie implementation for +Python.") + (license license:lgpl2.1+))) + +(define-public snakemake + (package + (name "snakemake") + (version "5.7.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "snakemake" version)) + (sha256 + (base32 "1pnpvvn8n2a78cg360wz3ldmpqrsm2wzi0c0dmvki9fnsw6fxdas")))) + (build-system python-build-system) + (arguments + ;; TODO: Package missing test dependencies. + '(#:tests? #f + #:phases + (modify-phases %standard-phases + ;; For cluster execution Snakemake will call Python. Since there is + ;; no suitable PYTHONPATH set, cluster execution will fail. We fix + ;; this by calling the snakemake wrapper instead. + (add-after 'unpack 'call-wrapper-not-wrapped-snakemake + (lambda* (#:key outputs #:allow-other-keys) + (substitute* "snakemake/executors.py" + (("\\{sys.executable\\} -m snakemake") + (string-append (assoc-ref outputs "out") + "/bin/snakemake"))) + #t))))) + (propagated-inputs + `(("python-appdirs" ,python-appdirs) + ("python-configargparse" ,python-configargparse) + ("python-datrie" ,python-datrie) + ("python-docutils" ,python-docutils) + ("python-gitpython" ,python-gitpython) + ("python-jinja2" ,python-jinja2) + ("python-jsonschema" ,python-jsonschema) + ("python-networkx" ,python-networkx) + ("python-psutil" ,python-psutil) + ("python-pyyaml" ,python-pyyaml) + ("python-ratelimiter" ,python-ratelimiter) + ("python-requests" ,python-requests) + ("python-wrapt" ,python-wrapt))) + (home-page "https://snakemake.readthedocs.io") + (synopsis "Python-based execution environment for make-like workflows") + (description + "Snakemake aims to reduce the complexity of creating workflows by +providing a clean and modern domain specific specification language (DSL) in +Python style, together with a fast and comfortable execution environment.") + (license license:expat))) + +(define-public python-pyqrcode + (package + (name "python-pyqrcode") + (version "1.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "PyQRCode" version)) + (sha256 + (base32 + "1m9ln8k9v7dfbh1i81225hx5mdsh8mpf9g7r4wpbfmiyfcs7dgzx")))) + (build-system python-build-system) + (home-page + "https://github.com/mnooner256/pyqrcode") + (synopsis "QR code generator") + (description + "Pyqrcode is a QR code generator written purely in Python with +SVG, EPS, PNG and terminal output.") + (license license:bsd-3))) + +(define-public python-seaborn + (package + (name "python-seaborn") + (version "0.10.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "seaborn" version)) + (sha256 + (base32 "1ffbms4kllihfycf6j57dziq4imgdjw03sqgifh5wzcd2d743zjr")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'start-xserver + (lambda* (#:key inputs #:allow-other-keys) + (let ((xorg-server (assoc-ref inputs "xorg-server"))) + ;; There must be a running X server and make check doesn't + ;; start one. Therefore we must do it. + (system (format #f "~a/bin/Xvfb :1 &" xorg-server)) + (setenv "DISPLAY" ":1") + #t))) + (replace 'check (lambda _ (invoke "pytest" "seaborn") #t))))) + (propagated-inputs + `(("python-pandas" ,python-pandas) + ("python-matplotlib" ,python-matplotlib) + ("python-numpy" ,python-numpy) + ("python-scipy" ,python-scipy))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("xorg-server" ,xorg-server-for-tests))) + (home-page "https://seaborn.pydata.org/") + (synopsis "Statistical data visualization") + (description + "Seaborn is a library for making attractive and informative statistical +graphics in Python. It is built on top of matplotlib and tightly integrated +with the PyData stack, including support for numpy and pandas data structures +and statistical routines from scipy and statsmodels.") + (properties `((python2-variant . ,(delay python2-seaborn)))) + (license license:bsd-3))) + +;; 0.9.1 is the last release with support for Python 2. +(define-public python2-seaborn + (let ((base (package-with-python2 (strip-python2-variant python-seaborn)))) + (package + (inherit base) + (version "0.9.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "seaborn" version)) + (sha256 + (base32 + "1bjnshjz4d6z3vrwfwall1a3yh8h3a1h47c3fg7458x9426alcys"))))))) + +(define-public python-mpmath + (package + (name "python-mpmath") + (version "0.19") + (source (origin + (method url-fetch) + (uri (string-append "http://mpmath.org/files/mpmath-" + version ".tar.gz")) + (sha256 + (base32 + "08ijsr4ifrqv3cjc26mkw0dbvyygsa99in376hr4b96ddm1gdpb8")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "python" "mpmath/tests/runtests.py" "-local")))))) + (home-page "http://mpmath.org") + (synopsis "Arbitrary-precision floating-point arithmetic in python") + (description + "@code{mpmath} can be used as an arbitrary-precision substitute for +Python's float/complex types and math/cmath modules, but also does much +more advanced mathematics.") + (license license:bsd-3))) + +(define-public python2-mpmath + (package-with-python2 python-mpmath)) + +(define-public python-bigfloat + (package + (name "python-bigfloat") + (version "0.3.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "bigfloat" version)) + (sha256 + (base32 "0xd7q4l7v0f463diznjv4k9wlaks80pn9drdqmfifi7zx8qvybi6")))) + (build-system python-build-system) + (inputs + `(("mpfr" ,mpfr))) + (home-page "https://github.com/mdickinson/bigfloat") + (synopsis "Arbitrary precision floating-point arithmetic for Python") + (description + "This package provides a Python interface to the MPFR library for +multiprecision arithmetic.") + (license license:lgpl3+))) + +(define-public python2-bigfloat + (package-with-python2 python-bigfloat)) + +(define-public python-sympy + (package + (name "python-sympy") + (version "1.1.1") + (source + (origin + (method url-fetch) + (uri (string-append + "https://github.com/sympy/sympy/releases/download/sympy-" + version "/sympy-" version ".tar.gz")) + (sha256 + (base32 "190n29sppw7g8ihilc5451y7jlfcaw56crqiqbf1jff43dlmfnxc")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; Run the core tests after installation. By default it would run + ;; *all* tests, which take a very long time to complete and are known + ;; to be flaky. + (delete 'check) + (add-after 'install 'check + (lambda* (#:key outputs #:allow-other-keys) + (invoke "python3" "-c" "import sympy; sympy.test(\"/core\")") + #t))))) + (propagated-inputs + `(("python-mpmath" ,python-mpmath))) + (home-page "https://www.sympy.org/") + (synopsis "Python library for symbolic mathematics") + (description + "SymPy is a Python library for symbolic mathematics. It aims to become a +full-featured computer algebra system (CAS) while keeping the code as simple +as possible in order to be comprehensible and easily extensible.") + (license license:bsd-3))) + +(define-public python2-sympy + (package + (inherit (package-with-python2 python-sympy)) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; Run the core tests after installation. By default it would run + ;; *all* tests, which take a very long time to complete and are known + ;; to be flaky. + (delete 'check) + (add-after 'install 'check + (lambda* (#:key outputs #:allow-other-keys) + (invoke "python" "-c" "import sympy; sympy.test(\"/core\")") + #t))))))) + +(define-public python-q + (package + (name "python-q") + (version "2.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "q" version)) + (sha256 + (base32 + "1mgfazh8fkizh6walra2zv885f3lcgr3nb02v1frfm4p8ddcy3yy")))) + (build-system python-build-system) + (home-page "https://github.com/zestyping/q") + (synopsis "Quick-and-dirty debugging output for tired programmers") + (description + "q is a Python module for \"print\" style of debugging Python code. It +provides convenient short API for print out of values, tracebacks, and +falling into the Python interpreter.") + (license license:asl2.0))) + +(define-public python2-q + (package-with-python2 python-q)) + +(define-public python-xlib + (package + (name "python-xlib") + (version "0.27") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/python-xlib/python-xlib") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "09kimic8rhprx3q8nzalc4aggg42ahqm4v5qcj8dm68yvxfdk986")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'start-xserver + (lambda* (#:key inputs #:allow-other-keys) + (let ((xorg-server (assoc-ref inputs "xorg-server"))) + ;; There must be a running X server and make check doesn't + ;; start one. Therefore we must do it. + (system (format #f "~a/bin/Xvfb :1 &" xorg-server)) + (setenv "DISPLAY" ":1") + #t)))))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-setuptools-scm" ,python-setuptools-scm) + ("python-six" ,python-six) + ("xorg-server" ,xorg-server))) + (home-page "https://github.com/python-xlib/python-xlib") + (synopsis "Python X11 client library") + (description + "The Python X Library is intended to be a fully functional +X client library for Python programs. It is useful to implement +low-level X clients. It is written entirely in Python.") + (license license:gpl2+))) + +(define-public python2-xlib + (package-with-python2 python-xlib)) + +(define-public python-singledispatch + (package + (name "python-singledispatch") + (version "3.4.0.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "singledispatch" version)) + (sha256 + (base32 + "171b7ip0hsq5qm83np40h3phlr36ym18w0lay0a8v08kvy3sy1jv")))) + (build-system python-build-system) + (native-inputs + `(("python-six" ,python-six))) ; required for conversion, not at run-time + (home-page + "https://docs.python.org/3/library/functools.html#functools.singledispatch") + (synopsis "Backport of singledispatch feature from Python 3.4") + (description + "This library brings functools.singledispatch from Python 3.4 to Python +2.6-3.3.") + (license license:expat))) + +(define-public python2-singledispatch + (package-with-python2 python-singledispatch)) + +;; the python- version can be removed with python-3.5 +(define-public python-backports-abc + (package + (name "python-backports-abc") + (version "0.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "backports_abc" version)) + (sha256 + (base32 + "1pkv8d1zxj5f9i227dxbjczncbv7ks7ywnjwyxfjagm02i2yafq3")))) + (build-system python-build-system) + (home-page "https://github.com/cython/backports_abc") + (synopsis "Backport of additions to the 'collections.abc' module") + (description + "Python-backports-abc provides a backport of additions to the +@code{collections.abc} module in Python-3.5.") + (license license:psfl))) + +(define-public python2-backports-abc + (package-with-python2 python-backports-abc)) + +(define-public python-backports-csv + (package + (name "python-backports-csv") + (version "1.0.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "backports.csv" version)) + (sha256 + (base32 "0vdx5jlhs91iizc8j8l8811nqprwvdx39pgkdc82w2qkfgzxyxqj")))) + (build-system python-build-system) + (home-page "https://github.com/ryanhiebert/backports.csv") + (synopsis "Backport of Python 3's csv module for Python 2") + (description + "Provides a backport of Python 3's @code{csv} module for parsing +comma separated values. The API of the @code{csv} module in Python 2 +is drastically different from the @code{csv} module in Python 3. +This is due, for the most part, to the difference between str in +Python 2 and Python 3.") + (license license:psfl))) + +(define-public python2-backports-csv + (package-with-python2 python-backports-csv)) + +(define-public python2-backports-shutil-get-terminal-size + (package + (name "python2-backports-shutil-get-terminal-size") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "backports.shutil_get_terminal_size" version)) + (sha256 + (base32 + "107cmn7g3jnbkp826zlj8rrj19fam301qvaqf0f3905f5217lgki")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (setenv "PYTHONPATH" (string-append "./build/lib:" + (getenv "PYTHONPATH"))) + (invoke "py.test" "-v")))))) + (native-inputs + `(("python2-pytest" ,python2-pytest))) + (home-page "https://github.com/chrippa/backports.shutil_get_terminal_size") + (synopsis "Backport of Python 3.3's @code{shutil.get_terminal_size}") + (description + "This package provides a backport of the @code{get_terminal_size +function} from Python 3.3's @code{shutil}. +Unlike the original version it is written in pure Python rather than C, +so it might be a tiny bit slower.") + (license license:expat))) + +(define-public python-waf + (package + (name "python-waf") + (version "2.0.19") + (source (origin + (method url-fetch) + (uri (string-append "https://waf.io/" + "waf-" version ".tar.bz2")) + (sha256 + (base32 + "19dvqbsvxz7ch03dh1v0znklrwxlz6yzddc3k9smzrrgny4jch6q")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'build + (lambda _ + ;; XXX: Find a way to add all extra tools. + (let ((tools '("gccdeps" + "clang_compilation_database"))) + (invoke "python" "waf-light" "configure" "build" + (string-append "--tools=" + (string-join tools ",")))))) + (replace 'check + (lambda _ + (invoke "python" "waf" "--version"))) + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (install-file "waf" (string-append out "/bin"))) + #t)) + ;; waf breaks when it is wrapped. + (delete 'wrap)))) + (home-page "https://waf.io/") + (synopsis "Python-based build system") + (description + "Waf is a Python-based framework for configuring, compiling and installing +applications.") + (license license:bsd-3))) + +(define-public python2-waf + (package-with-python2 python-waf)) + +(define-public python-pyzmq + (package + (name "python-pyzmq") + (version "17.1.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyzmq" version)) + (sha256 + (base32 "1pyxxrz60f88ffm0y6vpbx3q8jcr9ybz8fcilihwzwhh36n84ax7")))) + (build-system python-build-system) + (arguments + `(#:configure-flags + (list (string-append "--zmq=" (assoc-ref %build-inputs "zeromq"))) + ;; FIXME: You must build pyzmq with 'python setup.py build_ext + ;; --inplace' for 'python setup.py test' to work. + #:tests? #f)) + (inputs + `(("zeromq" ,zeromq))) + (native-inputs + `(("pkg-config" ,pkg-config) + ("python-nose" ,python-nose))) + (home-page "https://github.com/zeromq/pyzmq") + (synopsis "Python bindings for 0MQ") + (description + "PyZMQ is the official Python binding for the ZeroMQ messaging library.") + (license license:bsd-4))) + +(define-public python2-pyzmq + (package-with-python2 python-pyzmq)) + +(define-public python-pep8 + ;; This package has been renamed to ‘pycodestyle’ and is no longer updated. + ;; Its last release (1.7.1) adds only a scary warning to this effect, breaking + ;; some dependents' test suites, and nothing more. + (package + (name "python-pep8") + (version "1.7.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pep8" version)) + (sha256 + (base32 + "002rkl4lsn6x2mxmf8ar00l0m8i3mzrc6pnzz77blyksmpsxa4x1")) + (patches (search-patches "python-pep8-stdlib-tokenize-compat.patch")))) + (build-system python-build-system) + (home-page "https://pep8.readthedocs.org/") + (synopsis "Python style guide checker") + (description + "This tools checks Python code against some of the style conventions in +PEP 8.") + (license license:expat))) + +(define-public python2-pep8 + (package-with-python2 python-pep8)) + +(define-public python-pyflakes + (package + (name "python-pyflakes") + (version "2.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyflakes" version)) + (sha256 + (base32 + "1j3zqbiwkyicvww499bblq33x0bjpzdrxajhaysr7sk7x5gdgcim")))) + (build-system python-build-system) + (home-page + "https://github.com/pyflakes/pyflakes") + (synopsis "Passive checker of Python programs") + (description + "Pyflakes statically checks Python source code for common errors.") + (license license:expat))) + +(define-public python2-pyflakes + (package-with-python2 python-pyflakes)) + +;; Flake8 2.6 requires an older version of pyflakes. +;; This should be removed ASAP. +(define-public python-pyflakes-1.2 + (package (inherit python-pyflakes) + (version "1.2.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyflakes" version)) + (sha256 + (base32 + "17hkw8yd44cr8fz13phy4aih3r5j2p7ild4zlvqdh2c8dmiinjif")))) + (arguments + '(#:phases + (modify-phases %standard-phases + ;; This one test fails. + (replace 'check + (lambda _ (invoke "pytest" "-vv" "-k" "not test_f_string")))))) + (native-inputs + `(("python-pytest" ,python-pytest))))) + +(define-public python-mccabe + (package + (name "python-mccabe") + (version "0.6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "mccabe" version)) + (sha256 + (base32 + "07w3p1qm44hgxf3vvwz84kswpsx6s7kvaibzrsx5dzm0hli1i3fx")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest-bootstrap) + ("python-pytest-runner" ,python-pytest-runner))) + (home-page "https://github.com/flintwork/mccabe") + (synopsis "McCabe checker, plugin for flake8") + (description + "This package provides a Flake8 plug-in to compute the McCabe cyclomatic +complexity of Python source code.") + (license license:expat))) + +(define-public python2-mccabe + (package-with-python2 python-mccabe)) + +(define-public python-mccabe-0.2.1 + (package (inherit python-mccabe) + (version "0.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "mccabe" version)) + (sha256 + (base32 + "0fi4a81kr5bcv5p4xgibqr595hyj5dafkqgsmfk96mfy8w71fajs")))))) + +(define-public python2-mccabe-0.2.1 + (package-with-python2 python-mccabe-0.2.1)) + +;; Flake8 2.4.1 requires an older version of pep8. +;; This should be removed ASAP. +(define-public python-pep8-1.5.7 + (package (inherit python-pep8) + (version "1.5.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pep8" version)) + (sha256 + (base32 + "12b9bbdbwnspxgak14xg58c130x2n0blxzlms5jn2dszn8qj3d0m")))) + (arguments + ;; XXX Tests not compatible with Python 3.5. + '(#:tests? #f)))) + +(define-public python2-pep8-1.5.7 + (package-with-python2 python-pep8-1.5.7)) + +(define-public python-flake8 + (package + (name "python-flake8") + (version "3.8.3") + (source (origin + (method url-fetch) + (uri (pypi-uri "flake8" version)) + (sha256 + (base32 + "02527892hh0qjivxaiphzalj7q32qkna1cqaikjs7c03mk5ryjzh")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (invoke "pytest" "-v") + #t))))) + (propagated-inputs + `(("python-pycodestyle" ,python-pycodestyle) + ("python-entrypoints" ,python-entrypoints) + ("python-pyflakes" ,python-pyflakes) + ("python-mccabe" ,python-mccabe))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest-bootstrap))) + (home-page "https://gitlab.com/pycqa/flake8") + (synopsis + "The modular source code checker: pep8, pyflakes and co") + (description + "Flake8 is a wrapper around PyFlakes, pep8 and python-mccabe.") + (properties `((python2-variant . ,(delay python2-flake8)))) + (license license:expat))) + +(define-public python2-flake8 + (let ((base (package-with-python2 (strip-python2-variant python-flake8)))) + (package (inherit base) + (propagated-inputs + `(("python2-configparser" ,python2-configparser) + ("python2-enum34" ,python2-enum34) + ("python2-functools32" ,python2-functools32) + ("python2-typing" ,python2-typing) + ,@(package-propagated-inputs base)))))) + +;; python-hacking requires flake8 <2.7.0. +(define-public python-flake8-2.6 + (package + (inherit python-flake8) + (version "2.6.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "flake8" version)) + (sha256 + (base32 + "0y57hzal0j84dh9i1g1g6dc4aywvrnhy2fjmmbglpv5ajihxh713")))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'use-later-pycodestyles + (lambda __ + (substitute* '("flake8.egg-info/requires.txt" + "setup.py") + (("pycodestyle >= 2.0, < 2.1") + "pycodestyle >= 2.0")) + #t)) + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (invoke "pytest" "-v") + #t))))) + (propagated-inputs + `(("python-pep8" ,python-pep8) + ("python-pycodestyle" ,python-pycodestyle) + ("python-entrypoints" ,python-entrypoints) + ("python-pyflakes" ,python-pyflakes-1.2) + ("python-mccabe" ,python-mccabe))))) + +(define-public python-flake8-bugbear + (package + (name "python-flake8-bugbear") + (version "20.1.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "flake8-bugbear" version)) + (sha256 + (base32 + "0qiihb242fygzyrfynq913ak7cdmx8mcac9c0zk3y5gv16qf80mx")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-before 'check 'disable-test + (lambda _ + ;; This test fails on slow computers. + (substitute* "tests/test_bugbear.py" + (("def test_does_not_crash_on_any_valid_code") + "def _test_does_not_crash_on_any_valid_code"))))))) + (native-inputs + `(("python-hypothesis" ,python-hypothesis) + ("python-hypothesmith" ,python-hypothesmith))) + (propagated-inputs + `(("python-attrs" ,python-attrs) + ("python-flake8" ,python-flake8))) + (home-page "https://github.com/PyCQA/flake8-bugbear") + (synopsis + "Flake8 plugin for finding likely bugs and design problems in your program") + (description + "This package contains a plugin for Flake8 finding likely bugs and +design problems in your program. It contains warnings that don't belong +in pyflakes and pycodestyle.") + (license license:expat))) + +(define-public python-flake8-polyfill + (package + (name "python-flake8-polyfill") + (version "1.0.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "flake8-polyfill" version)) + (sha256 + (base32 + "1nlf1mkqw856vi6782qcglqhaacb23khk9wkcgn55npnjxshhjz4")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; Be compatible with Pytest 4: + ;; https://gitlab.com/pycqa/flake8-polyfill/merge_requests/7 + (substitute* "setup.cfg" + (("\\[pytest\\]") + "[tool:pytest]")) + + (setenv "PYTHONPATH" + (string-append (getcwd) "/build/lib:" + (getenv "PYTHONPATH"))) + (invoke "py.test" "-v")))))) + (native-inputs + `(("python-flake8" ,python-flake8) + ("python-mock" ,python-mock) + ("python-pep8" ,python-pep8) + ("python-pycodestyle" ,python-pycodestyle) + ("python-pytest" ,python-pytest))) + (home-page "https://gitlab.com/pycqa/flake8-polyfill") + (synopsis "Polyfill package for Flake8 plugins") + (description + "This package that provides some compatibility helpers for Flake8 +plugins that intend to support Flake8 2.x and 3.x simultaneously.") + (license license:expat))) + +(define-public python2-flake8-polyfill + (package-with-python2 python-flake8-polyfill)) + +(define-public python-flake8-pyi + (package + (name "python-flake8-pyi") + (version "20.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "flake8-pyi" version)) + (sha256 + (base32 + "1zpq4s9kp8w95pccmhhyyx1ff2zhnidcf1zb3xs46lzcx9plvnzk")))) + (build-system python-build-system) + (propagated-inputs + `(("python-attrs" ,python-attrs) + ("python-flake8" ,python-flake8) + ("python-pyflakes" ,python-pyflakes))) + (home-page "https://github.com/ambv/flake8-pyi") + (synopsis + "Flake8 plugin that provides specializations for type hinting stub files") + (description + "This package contains a plugin that provides specializations for +type hinting stub files, especially interesting for linting typeshed. It +adds the @file{.pyi} extension to the default value of the @code{--filename} +command-line argument to Flake8. This means stubs are linted by default with +this plugin enabled, without needing to explicitly list every file. It +modifies PyFlakes runs for @file{.pyi} files to defer checking type annotation +expressions after the entire file has been read. This enables support for +first-class forward references that stub files use.") + (license license:expat))) + +(define-public python-mistune + (package + (name "python-mistune") + (version "0.8.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "mistune" version)) + (sha256 + (base32 + "0vkmsh0x480rni51lhyvigfdf06b9247z868pk3bal1wnnfl58sr")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose) + ("python-cython" ,python-cython))) + (home-page "https://github.com/lepture/mistune") + (synopsis "Markdown parser in pure Python") + (description "This package provides a fast markdown parser in pure +Python.") + (license license:bsd-3))) + +(define-public python2-mistune + (package-with-python2 python-mistune)) + +(define-public python-markdown + (package + (name "python-markdown") + (version "3.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Markdown" version)) + (sha256 + (base32 + "00k91gwhxnm8jdnm2v5xjz9irj6dbi7afywz2hpakqdbxs1ydzlh")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose) + ("python-pyyaml" ,python-pyyaml))) + (home-page "https://python-markdown.github.io/") + (synopsis "Python implementation of Markdown") + (description + "This package provides a Python implementation of John Gruber's +Markdown. The library features international input, various Markdown +extensions, and several HTML output formats. A command line wrapper +markdown_py is also provided to convert Markdown files to HTML.") + (properties `((python2-variant . ,(delay python2-markdown)))) + (license license:bsd-3))) + +;; Markdown 3.2 dropped support for Python 2. +(define-public python2-markdown + (let ((base (package-with-python2 (strip-python2-variant python-markdown)))) + (package/inherit + base + (version "3.1.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "Markdown" version)) + (sha256 + (base32 + "0yhylk4ffqqs7x086fav4pnfsl1021v7lghznzkififprmmqfl1f"))))))) + +(define-public python-ptyprocess + (package + (name "python-ptyprocess") + (version "0.5.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ptyprocess" version)) + (sha256 + (base32 + "0ra31k10v3629xq0kdn8lwmfbi97anmk48r03yvh7mks0kq96hg6")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (invoke "nosetests")))))) + (home-page "https://github.com/pexpect/ptyprocess") + (synopsis "Run a subprocess in a pseudo terminal") + (description + "This package provides a Python library used to launch a subprocess in a +pseudo terminal (pty), and interact with both the process and its pty.") + (license license:isc))) + +(define-public python2-ptyprocess + (package-with-python2 python-ptyprocess)) + +(define-public python-cram + (package + (name "python-cram") + (version "0.7") + (home-page "https://bitheap.org/cram/") + (source (origin + (method url-fetch) + (uri (list (string-append home-page "cram-" + version ".tar.gz") + (pypi-uri "cram" version))) + (sha256 + (base32 + "0bvz6fwdi55rkrz3f50zsy35gvvwhlppki2yml5bj5ffy9d499vx")))) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-source + (lambda _ + (substitute* (find-files "cram" ".*\\.py$") + ;; Replace default shell path. + (("/bin/sh") (which "sh"))) + (substitute* (find-files "tests" ".*\\.t$") + (("md5") "md5sum") + (("/bin/bash") (which "bash")) + (("/bin/sh") (which "sh"))) + (substitute* "cram/_test.py" + ;; This hack works around a bug triggered by substituting + ;; the /bin/sh paths. "tests/usage.t" compares the output of + ;; "cram -h", which breaks the output at 80 characters. This + ;; causes the line showing the default shell to break into two + ;; lines, but the test expects a single line... + (("env\\['COLUMNS'\\] = '80'") + "env['COLUMNS'] = '160'")) + + (substitute* "Makefile" + ;; Recent versions of python-coverage have caused the test + ;; coverage to decrease (as of version 0.7). Allow that. + (("--fail-under=100") + "--fail-under=90")) + + #t)) + (replace 'check + ;; The test phase uses the built library and executable. + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (setenv "PATH" (string-append (getenv "PATH") ":" + (assoc-ref outputs "out") "/bin")) + (invoke "make" "test")))))) + (build-system python-build-system) + (native-inputs + `(("python-coverage" ,python-coverage) + ("which" ,which))) + (synopsis "Simple testing framework for command line applications") + (description + "Cram is a functional testing framework for command line applications. +Cram tests look like snippets of interactive shell sessions. Cram runs each +command and compares the command output in the test with the command’s actual +output.") + (license license:gpl2+))) + +(define-public python2-cram + (package-with-python2 python-cram)) + +(define-public python-crashtest + (package + (name "python-crashtest") + (version "0.3.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "crashtest" version)) + (sha256 + (base32 + "056zzbznl3xfnbblfci8lvcam3h7k7va68vi6asrm4q0ck4nrh79")))) + (build-system python-build-system) + (home-page "https://github.com/sdispater/crashtest") + (synopsis "Manage Python errors with ease") + (description + "Python library that makes exceptions handling and inspection easier.") + (license license:expat))) + +(define-public python-straight-plugin + (package + (name "python-straight-plugin") + (version "1.4.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "straight.plugin" version)) + (sha256 + (base32 + "069pjll4383p4kkgvcc40hgyvf79j2wdbpgwz77yigzxksh1gj62")))) + (build-system python-build-system) + (home-page "https://github.com/ironfroggy/straight.plugin") + (synopsis "Simple namespaced plugin facility") + (description "Straight Plugin provides a type of plugin you can create from +almost any existing Python modules, and an easy way for outside developers to +add functionality and customization to your projects with their own plugins.") + (license license:expat))) + +(define-public python2-straight-plugin + (package-with-python2 python-straight-plugin)) + +(define-public python-fonttools + (package + (name "python-fonttools") + (version "4.6.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "fonttools" version ".zip")) + (sha256 + (base32 + "1mq9kdzhcsp96bhv7smnrpdg1s4z5wh70bsl99c0jmcrahqdisqq")))) + (build-system python-build-system) + (native-inputs + `(("unzip" ,unzip) + ("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner))) + (home-page "https://github.com/fonttools/fonttools") + (synopsis "Tools to manipulate font files") + (description + "FontTools/TTX is a library to manipulate font files from Python. It +supports reading and writing of TrueType/OpenType fonts, reading and writing +of AFM files, reading (and partially writing) of PS Type 1 fonts. The package +also contains a tool called “TTX” which converts TrueType/OpenType fonts to and +from an XML-based format.") + (license license:expat))) + +;; Fonttools 4.x dropped support for Python 2, so stick with 3.x here. +(define-public python2-fonttools + (let ((base (package-with-python2 (strip-python2-variant python-fonttools)))) + (package/inherit + base + (version "3.44.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "fonttools" version ".zip")) + (sha256 + (base32 + "0v6399g755f2hn1ry62i5b6gdinf2fpx2966v3bxh6bjw1accb5p"))))))) + +(define-public python-ly + (package + (name "python-ly") + (version "0.9.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri name version)) + (sha256 + (base32 + "0x98dv7p8mg26p4816yy8hz4f34zf6hpnnfmr56msgh9jnsm2qfl")))) + (build-system python-build-system) + (arguments + ;; FIXME: Some tests need network access. + '(#:tests? #f)) + (synopsis "Tool and library for manipulating LilyPond files") + (description "This package provides a Python library to parse, manipulate +or create documents in LilyPond format. A command line program ly is also +provided that can be used to do various manipulations with LilyPond files.") + (home-page "https://pypi.org/project/python-ly/") + (license license:gpl2+))) + +(define-public python-appdirs + (package + (name "python-appdirs") + (version "1.4.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "appdirs" version)) + (sha256 + (base32 + "14id6wxi12lgyw0mg3bcfnf888ad07jz9yj46gfzhn186z8rcn4y")))) + (build-system python-build-system) + (home-page "https://github.com/ActiveState/appdirs") + (synopsis + "Determine platform-specific dirs, e.g. a \"user data dir\"") + (description + "This module provides a portable way of finding out where user data +should be stored on various operating systems.") + (license license:expat))) + +(define-public python2-appdirs + (package-with-python2 python-appdirs)) + +(define-public python-llfuse + (package + (name "python-llfuse") + (version "1.3.6") + (source (origin + (method url-fetch) + (uri (pypi-uri "llfuse" version ".tar.bz2")) + (sha256 + (base32 + "1j9fzxpgmb4rxxyl9jcf84zvznhgi3hnh4hg5vb0qaslxkvng8ii")))) + (build-system python-build-system) + (inputs + `(("fuse" ,fuse) + ("attr" ,attr))) + (native-inputs + `(("pkg-config" ,pkg-config))) + (synopsis "Python bindings for FUSE") + (description + "Python-LLFUSE is a set of Python bindings for the low level FUSE API.") + (home-page "https://bitbucket.org/nikratio/python-llfuse/") + (license license:lgpl2.0+) + (properties `((python2-variant . ,(delay python2-llfuse)))))) + +(define-public python2-llfuse + (package (inherit (package-with-python2 + (strip-python2-variant python-llfuse))) + (propagated-inputs `(("python2-contextlib2" ,python2-contextlib2))))) + +;; For attic-0.16 +(define-public python-llfuse-0.41 + (package (inherit python-llfuse) + (version "0.41.1") + (source (origin + (method url-fetch) + (uri (string-append + "https://bitbucket.org/nikratio/python-llfuse/downloads/" + "llfuse-" version ".tar.bz2")) + (sha256 + (base32 + "1imlqw9b73086y97izr036f58pgc5akv4ihc2rrf8j5h75jbrlaa")))) + ;; Python-LLFUSE < 0.42 includes underscore.js, which is MIT (expat) + ;; licensed. The rest of the package is licensed under LGPL2.0 or later. + (license (list license:expat license:lgpl2.0+)))) + +(define-public python-msgpack + (package + (name "python-msgpack") + (version "1.0.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "msgpack" version)) + (sha256 + (base32 + "1h5mxh84rcw04dvxy1qbfn2hisavfqgilh9k09rgyjhd936dad4m")))) + (build-system python-build-system) + (arguments + `(#:modules ((guix build utils) + (guix build python-build-system) + (ice-9 ftw) + (srfi srfi-1) + (srfi srfi-26)) + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (let ((cwd (getcwd))) + (setenv "PYTHONPATH" + (string-append cwd "/build/" + (find (cut string-prefix? "lib" <>) + (scandir (string-append cwd "/build"))) + ":" + (getenv "PYTHONPATH"))) + (invoke "pytest" "-v" "test"))))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (synopsis "MessagePack (de)serializer") + (description "MessagePack is a fast, compact binary serialization format, +suitable for similar data to JSON. This package provides CPython bindings for +reading and writing MessagePack data.") + (home-page "https://pypi.org/project/msgpack/") + (license license:asl2.0))) + +;; This msgpack library's name changed from "python-msgpack" to "msgpack" with +;; release 0.5. Some packages like borg still call it by the old name for now. +;; +(define-public python-msgpack-transitional + (package + (inherit python-msgpack) + (name "python-msgpack-transitional") + (version "0.5.6") + (source (origin + (method url-fetch) + (uri (pypi-uri "msgpack" version)) + (sha256 + (base32 + "1hz2dba1nvvn52afg34liijsm7kn65cmn06dl0xbwld6bb4cis0f")))) + (arguments + (substitute-keyword-arguments (package-arguments python-msgpack) + ((#:phases phases) + `(modify-phases ,phases + (add-after 'unpack 'configure-transitional + (lambda _ + ;; Keep using the old name. + (substitute* "setup.py" + (("TRANSITIONAL = False") + "TRANSITIONAL = 1")) + #t)))))))) + +(define-public python2-msgpack + (package-with-python2 python-msgpack)) + +(define-public python-netaddr + (package + (name "python-netaddr") + (version "0.7.19") + (source + (origin + (method url-fetch) + (uri (pypi-uri "netaddr" version)) + (sha256 + (base32 + "1zdfadvpq4lmcqzr383gywxn4xyn355kj1n3lk9q2l03vmyfrbiq")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) ;; No tests. + (home-page "https://github.com/drkjam/netaddr/") + (synopsis "Pythonic manipulation of network addresses") + (description + "A Python library for representing and manipulating IPv4, IPv6, CIDR, EUI +and MAC network addresses.") + (license license:bsd-3))) + +(define-public python2-netaddr + (package-with-python2 python-netaddr)) + +(define-public python2-pyroute2 + (package + (name "python2-pyroute2") + (version "0.5.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyroute2" version)) + (sha256 + (base32 + "1gmz4r1w0yzj6fjjypnalmfyy0lnfznydyn62gi3wk50j5hhxbny")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) ;Python 3.x is not supported + (home-page "https://github.com/svinota/pyroute2") + (synopsis "Python netlink library") + (description + "Pyroute2 is a pure Python netlink library with minimal dependencies. +Supported netlink families and protocols include: +@itemize +@item rtnl, network settings - addresses, routes, traffic controls +@item nfnetlink - netfilter API: ipset, nftables, ... +@item ipq - simplest userspace packet filtering, iptables QUEUE target +@item devlink - manage and monitor devlink-enabled hardware +@item generic - generic netlink families + @itemize + @item nl80211 - wireless functions API (basic support) + @item taskstats - extended process statistics + @item acpi_events - ACPI events monitoring + @item thermal_events - thermal events monitoring + @item VFS_DQUOT - disk quota events monitoring + @end itemize +@end itemize") + (license license:gpl2+))) + +(define-public python-wrapt + (package + (name "python-wrapt") + (version "1.11.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "wrapt" version)) + (sha256 + (base32 + "1q81762dgsgrd12f8qc39zk8s5wll3m5xc32jdmlf6cls4gh4njn")))) + (build-system python-build-system) + (arguments + ;; Tests are not included in the tarball, they are only available in the + ;; git repository. + `(#:tests? #f)) + (home-page "https://github.com/GrahamDumpleton/wrapt") + (synopsis "Module for decorators, wrappers and monkey patching") + (description + "The aim of the wrapt module is to provide a transparent object proxy for + Python, which can be used as the basis for the construction of function + wrappers and decorator functions.") + (license license:bsd-2))) + +(define-public python2-wrapt + (package-with-python2 python-wrapt)) + +(define-public python-xlrd + (package + (name "python-xlrd") + (version "1.2.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "xlrd" version)) + (sha256 + (base32 + "1ci93fda4n67qhdvfl16zasyxrpygzk53hs6m8z0rd4dxrnb6vjl")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; Some tests depend on writing a temporary file to the user's home + ;; directory. + (add-after 'unpack 'fix-tests + (lambda _ + (delete-file "tests/test_open_workbook.py") + #t))))) + (home-page "http://www.python-excel.org/") + (synopsis "Library for extracting data from Excel files") + (description "This package provides a library to extract data from +spreadsheets using Microsoft Excel proprietary file formats @samp{.xls} and +@samp{.xlsx} (versions 2.0 onwards). It has support for Excel dates and is +Unicode-aware. It is not intended as an end-user tool.") + (license license:bsd-3))) + +(define-public python2-xlrd + (package-with-python2 python-xlrd)) + +(define-public python-prettytable + (package + (name "python-prettytable") + (version "0.7.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "prettytable" version ".tar.bz2")) + (sha256 + (base32 + "0diwsicwmiq2cpzpxri7cyl5fmsvicafw6nfqf6p6p322dji2g45")))) + (build-system python-build-system) + (home-page "https://code.google.com/archive/p/prettytable/") + (synopsis "Display tabular data in an ASCII table format") + (description + "A library designed to represent tabular data in visually appealing ASCII +tables. PrettyTable allows for selection of which columns are to be printed, +independent alignment of columns (left or right justified or centred) and +printing of sub-tables by specifying a row range.") + (license license:bsd-3))) + +(define-public python2-prettytable + (package-with-python2 python-prettytable)) + +(define-public python-tables + (package + (name "python-tables") + (version "3.6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "tables" version)) + (sha256 + (base32 + "0j8vnxh2m5n0cyk9z3ndcj5n1zj5rdxgc1gb78bqlyn2lyw75aa9")) + (modules '((guix build utils))) + (snippet + '(begin + ;; Remove pre-compiled .pyc files from source. + (for-each delete-file-recursively + (find-files "." "__pycache__" #:directories? #t)) + (for-each delete-file (find-files "." "\\.pyc$")) + #t)))) + (build-system python-build-system) + (arguments + `(;; FIXME: python-build-system does not pass configure-flags to "build" + ;; or "check", so we must override the build and check phases. + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'use-gcc + (lambda _ + (substitute* "setup.py" + (("^( +)compiler = new_compiler\\(\\)" line indent) + (string-append line + "\n" + indent + "compiler.set_executables(compiler='gcc'," + "compiler_so='gcc'," + "linker_exe='gcc'," + "linker_so='gcc -shared')"))) + #t)) + (add-after 'unpack 'disable-tuning + (lambda _ + (substitute* "setup.py" + (("cpu_flags = .*") + "cpu_flags = ['sse2']\n")) + #t)) + (replace 'build + (lambda* (#:key inputs #:allow-other-keys) + (invoke "python" "setup.py" "build" + (string-append "--hdf5=" + (assoc-ref inputs "hdf5"))))) + (replace 'check + (lambda* (#:key inputs #:allow-other-keys) + (invoke "python" "setup.py" "check" + (string-append "--hdf5=" + (assoc-ref inputs "hdf5")))))))) + (propagated-inputs + `(("python-numexpr" ,python-numexpr) + ("python-numpy" ,python-numpy))) + (native-inputs + `(("python-cython" ,python-cython) + ("pkg-config" ,pkg-config))) + (inputs + `(("hdf5" ,hdf5-1.10) + ("bzip2" ,bzip2) + ("zlib" ,zlib))) + (home-page "https://www.pytables.org/") + (synopsis "Hierarchical datasets for Python") + (description "PyTables is a package for managing hierarchical datasets and +designed to efficiently cope with extremely large amounts of data.") + (license license:bsd-3))) + +(define-public python2-tables + (package-with-python2 python-tables)) + +(define-public python-pytest-black + (package + (name "python-pytest-black") + (version "0.3.8") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pytest-black" version)) + (sha256 + (base32 + "04lppqydxm0f3f3x0l8hj7v0j6d8syj34jc37yzqwqcyqsnaga81")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pytest" ,python-pytest) + ("python-black" ,python-black) + ("python-toml" ,python-toml))) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm))) + (home-page "https://github.com/shopkeep/pytest-black") + (synopsis "Pytest plugin to enable format checking with black") + (description + "This package provides a pytest plugin to enable format checking with the +Python code formatter \"black\".") + (license license:expat))) + +(define-public python-get-version + (package + (name "python-get-version") + (version "2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "get_version" version)) + (sha256 + (base32 + "1g15jyx33vkxavv9hwv275cs4g9bp2i1y942raw3fxamq8kbaml1")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pygments" ,python-pygments) + ("python-pytest" ,python-pytest) + ("python-pytest-black" ,python-pytest-black) + ("python-pytest-cov" ,python-pytest-cov) + ("python-setuptools" ,python-setuptools) + ("python-testpath" ,python-testpath))) + (home-page "https://github.com/flying-sheep/get_version") + (synopsis "Version helper in the spirit of versioneer") + (description + "This package provides a version helper that lets you automatically use +the latest @code{vX.X.X} Git tag as the version in your Python package. It +also supports getting the version from Python source distributions or, once +your package is installed, via @code{pkg_resources} (part of +@code{setuptools}).") + (license license:gpl3+))) + +(define-public python-legacy-api-wrap + (package + (name "python-legacy-api-wrap") + (version "1.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "legacy-api-wrap" version)) + (sha256 + (base32 + "06qhp0g543dy98vpa41hwdalvdbsjfc3ldk474yr9sd75mhl8jh3")))) + (build-system python-build-system) + (propagated-inputs + `(("python-get-version" ,python-get-version) + ("python-pytest" ,python-pytest) + ("python-pytest-black" ,python-pytest-black) + ("python-pytest-cov" ,python-pytest-cov) + ("python-setuptools" ,python-setuptools))) + (home-page "https://github.com/flying-sheep/legacy-api-wrap") + (synopsis "Legacy API wrapper") + (description "This module defines a decorator to wrap legacy APIs. The +primary use case is APIs defined before keyword-only parameters existed.") + (license license:gpl3+))) + +(define-public python-pyasn1 + (package + (name "python-pyasn1") + (version "0.4.8") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyasn1" version)) + (sha256 + (base32 + "1fnhbi3rmk47l9851gbik0flfr64vs5j0hbqx24cafjap6gprxxf")))) + (build-system python-build-system) + (home-page "http://pyasn1.sourceforge.net/") + (synopsis "ASN.1 types and codecs") + (description + "This is an implementation of ASN.1 types and codecs in Python. It is +suitable for a wide range of protocols based on the ASN.1 specification.") + (license license:bsd-2))) + +(define-public python2-pyasn1 + (package-with-python2 python-pyasn1)) + +(define-public python-pyasn1-modules + (package + (name "python-pyasn1-modules") + (version "0.2.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyasn1-modules" version)) + (sha256 + (base32 + "0ivm850yi7ajjbi8j115qpsj95bgxdsx48nbjzg0zip788c3xkx0")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pyasn1" ,python-pyasn1))) + (home-page "https://sourceforge.net/projects/pyasn1/") + (synopsis "ASN.1 codec implementations") + (description + "Pyasn1-modules is a collection of Python modules providing ASN.1 types and +implementations of ASN.1-based codecs and protocols.") + (license license:bsd-3))) + +(define-public python2-pyasn1-modules + (package-with-python2 python-pyasn1-modules)) + +(define-public python-ipaddress + (package + (name "python-ipaddress") + (version "1.0.22") + (source (origin + (method url-fetch) + (uri (pypi-uri "ipaddress" version)) + (sha256 + (base32 + "0b570bm6xqpjwqis15pvdy6lyvvzfndjvkynilcddjj5x98wfimi")))) + (build-system python-build-system) + (home-page "https://github.com/phihag/ipaddress") + (synopsis "IP address manipulation library") + (description + "This package provides a fast, lightweight IPv4/IPv6 manipulation library + in Python. This library is used to create, poke at, and manipulate IPv4 and + IPv6 addresses and networks. This is a port of the Python 3.3 ipaddress + module to older versions of Python.") + (license license:psfl))) + +(define-public python2-ipaddress + (package-with-python2 python-ipaddress)) + +(define-public python2-ipaddr + (package + (name "python2-ipaddr") + (version "2.1.11") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ipaddr" version)) + (sha256 + (base32 "1dwq3ngsapjc93fw61rp17fvzggmab5x1drjzvd4y4q0i255nm8v")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 ;version 2 only + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (invoke "python" "ipaddr_test.py")))))) + (home-page "https://github.com/google/ipaddr-py") + (synopsis "IP address manipulation library") + (description + "Ipaddr is a Python@tie{}2 library for creating and manupilating IPv4 and +IPv6 addresses and networks. + +For new implementations you may prefer to use the standard module +@code{ipaddress}, which was introduced in Python 3.3 and backported to older +versions of Python.") + (license license:asl2.0))) + +(define-public python-idna + (package + (name "python-idna") + (version "2.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri "idna" version)) + (sha256 + (base32 + "1jxp2pdi8y4asi7ka1zhx3yx09kv8kzj533f0ds7viz49b0x323m")))) + (build-system python-build-system) + (home-page "https://github.com/kjd/idna") + (synopsis "Internationalized domain names in applications") + (description + "This is a library to support the Internationalised Domain Names in +Applications (IDNA) protocol as specified in RFC 5891. This version of the +protocol is often referred to as “IDNA2008” and can produce different results +from the earlier standard from 2003. The library is also intended to act as a +suitable drop-in replacement for the “encodings.idna” module that comes with +the Python standard library but currently only supports the older 2003 +specification.") + (license license:bsd-4))) + +(define-public python-idna-2.7 + (package (inherit python-idna) + (version "2.7") + (source (origin + (method url-fetch) + (uri (pypi-uri "idna" version)) + (sha256 + (base32 + "05jam7d31767dr12x0rbvvs8lxnpb1mhdb2zdlfxgh83z6k3hjk8")))))) + + +(define-public python2-idna + (package-with-python2 python-idna)) + +(define-public python-libsass + (package + (name "python-libsass") + (version "0.20.0") + (source + (origin + ;; PyPI tarball is missing some test files. + (method git-fetch) + (uri (git-reference + (url "https://github.com/sass/libsass-python") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0h9rj4k9izkfdvli8ip72bbvh6a7bvrv5pxz6zay2bq235gpfgfc")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; Use Guix package of libsass instead of compiling from a checkout. + (add-before 'build 'set-libsass + (lambda _ + (setenv "SYSTEM_SASS" (assoc-ref %build-inputs "libsass")) + #t)) + (replace 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (invoke "pytest" "sasstests.py" "-k" + ;; See https://github.com/sass/libsass/issues/3092. + ;; This test may work in a future release of libsass. + "not test_stack_trace_formatting")))))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-werkzeug" ,python-werkzeug))) + (inputs + `(("libsass" ,libsass))) + (propagated-inputs + `(("python-six" ,python-six))) + (home-page "https://sass.github.io/libsass-python/") + (synopsis "Straightforward binding of libsass for Python") + (description + "This package provides a simple Python extension module @code{sass} which +is binding LibSass.") + (license license:expat))) + +(define-public python-idna-ssl + (package + (name "python-idna-ssl") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "idna-ssl" version)) + (sha256 + (base32 + "0ydrc8hpg9mdr5hqq1lqfsfbn6sjq69slwpfrnlrm3k0phqg14qj")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ;circular dependency with python-aiohttp + (home-page "https://github.com/aio-libs/idna-ssl") + (synopsis "Patch @code{ssl.match_hostname} for Unicode(idna) domains support") + (description "Patch @code{ssl.match_hostname} for Unicode(idna) +domains support.") + (license license:expat))) + +(define-public python-pretend + (package + (name "python-pretend") + (version "1.0.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pretend" version)) + (sha256 + (base32 + "040vm94lcbscg5p81g1icmwwwa2jm7wrd1ybmxnv1sz8rl8bh3n9")))) + (build-system python-build-system) + (home-page "https://github.com/alex/pretend") + (synopsis "Library for stubbing in Python") + (description + "Pretend is a library to make stubbing with Python easier. Stubbing is a +technique for writing tests. You may hear the term mixed up with mocks, +fakes, or doubles. Basically, a stub is an object that returns pre-canned +responses, rather than doing any computation.") + (license license:bsd-3))) + +(define-public python2-pretend + (package-with-python2 python-pretend)) + +(define-public python-pip + (package + (name "python-pip") + (version "20.0.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pip" version)) + (sha256 + (base32 + "0zwnlsjn6mb742cr995zfbk9v56ygxp8w3k49601r9by9kmcic3x")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; there are no tests in the pypi archive. + (home-page "https://pip.pypa.io/") + (synopsis "Package manager for Python software") + (description + "Pip is a package manager for Python software, that finds packages on the +Python Package Index (PyPI).") + (license license:expat))) + +(define-public python2-pip + (package-with-python2 python-pip)) + +(define-public python-tlsh + (package + (name "python-tlsh") + (version "3.4.5") + (home-page "https://github.com/trendmicro/tlsh") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/trendmicro/tlsh") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1ydliir308xn4ywy705mmsh7863ldlixdvpqwdhbipzq9vfpmvll")))) + (build-system cmake-build-system) + (arguments + '(#:out-of-source? #f + #:phases (modify-phases %standard-phases + (replace + 'install + (lambda* (#:key outputs #:allow-other-keys) + ;; Build and install the Python bindings. The underlying + ;; C++ library is apparently not meant to be installed. + (let ((out (assoc-ref outputs "out"))) + (with-directory-excursion "py_ext" + (and (system* "python" "setup.py" "build") + (system* "python" "setup.py" "install" + (string-append "--prefix=" out)))))))))) + (inputs `(("python" ,python-wrapper))) ;for the bindings + (synopsis "Fuzzy matching library for Python") + (description + "Trend Micro Locality Sensitive Hash (TLSH) is a fuzzy matching library. +Given a byte stream with a minimum length of 256 bytes, TLSH generates a hash +value which can be used for similarity comparisons. Similar objects have +similar hash values, which allows for the detection of similar objects by +comparing their hash values. The byte stream should have a sufficient amount +of complexity; for example, a byte stream of identical bytes will not generate +a hash value.") + (license license:asl2.0))) + +(define-public python2-tlsh + (package + (inherit python-tlsh) + (name "python2-tlsh") + (inputs `(("python" ,python-2))))) + +(define-public python-termcolor + (package + (name "python-termcolor") + (version "1.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "termcolor" version)) + (sha256 + (base32 + "0fv1vq14rpqwgazxg4981904lfyp84mnammw7y046491cv76jv8x")))) + (build-system python-build-system) + (arguments + ;; There are no tests. + `(#:tests? #f)) + (home-page "https://pypi.org/project/termcolor/") + (synopsis "ANSII Color formatting for terminal output") + (description + "This package provides ANSII Color formatting for output in terminals.") + (license license:expat))) + +(define-public python2-termcolor + (package-with-python2 python-termcolor)) + +(define-public python-terminaltables + (package + (name "python-terminaltables") + (version "3.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "terminaltables" version)) + (sha256 + (base32 + "109vhldk6nv1z3hzp4dyqf6rjvlhl0y2k5k7qcm9fcrq5swhxszk")))) + (build-system python-build-system) + (home-page "https://github.com/Robpol86/terminaltables") + (synopsis + "Generate simple tables in terminals from a nested list of strings") + (description + "This package makes it easy to draw tables in terminal/console +applications from a list of lists of strings. It supports multi-line rows.") + (license license:expat))) + +(define-public python-libarchive-c + (package + (name "python-libarchive-c") + (version "2.9") + (source (origin + (method url-fetch) + (uri (pypi-uri "libarchive-c" version)) + (sha256 + (base32 + "0q7g6a97110bk0j5x81555kajyxh4sybaabab6v5sgr0xi6386cr")))) + (build-system python-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (add-before + 'build 'reference-libarchive + (lambda* (#:key inputs #:allow-other-keys) + ;; Retain the absolute file name of libarchive.so. + (let ((libarchive (assoc-ref inputs "libarchive"))) + (substitute* "libarchive/ffi.py" + (("find_library\\('archive'\\)") + (string-append "'" libarchive + "/lib/libarchive.so'")))))) + (replace 'check + (lambda _ (invoke "pytest" "-vv")))))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest))) + (inputs + `(("libarchive" ,libarchive))) + (home-page "https://github.com/Changaco/python-libarchive-c") + (synopsis "Python interface to libarchive") + (description + "This package provides Python bindings to libarchive, a C library to +access possibly compressed archives in many different formats. It uses +Python's @code{ctypes} foreign function interface (FFI).") + (license license:lgpl2.0+))) + +(define-public python2-libarchive-c + (package-with-python2 python-libarchive-c)) + +(define-public python-file + (package + (inherit file) + (name "python-file") + (build-system python-build-system) + (arguments + '(#:tests? #f ;no tests + #:configure-flags '("--single-version-externally-managed" "--root=/") + #:phases (modify-phases %standard-phases + (add-before 'build 'change-directory + (lambda _ + (chdir "python") + #t)) + (add-before 'build 'set-library-file-name + (lambda* (#:key inputs #:allow-other-keys) + (let ((file (assoc-ref inputs "file"))) + (substitute* "magic.py" + (("find_library\\('magic'\\)") + (string-append "'" file "/lib/libmagic.so'"))) + #t)))))) + (inputs `(("file" ,file))) + (native-inputs (if (%current-target-system) + `(("self" ,this-package)) + '())) + (synopsis "Python bindings to the libmagic file type guesser. Note that +this module and the python-magic module both provide a \"magic.py\" file; +these two modules, which are different and were developed separately, both +serve the same purpose: provide Python bindings for libmagic."))) + +(define-public python2-file + (package-with-python2 python-file)) + +(define-public python-debian + (package + (name "python-debian") + (home-page "https://salsa.debian.org/python-debian-team/python-debian") + (version "0.1.36") + (source + (origin + ;; Use git-fetch, as pypi doesn't include test suite. + (method git-fetch) + (uri (git-reference + (url home-page) + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0qy6x28bj6yfikhjww932v5xq4mf5bm1iczl7acy4c7zm6mwhqfa")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (add-after 'unpack 'remove-debian-specific-tests + ;; python-apt, apt and dpkg are not yet available in guix, + ;; and these tests heavily depend on them. + (lambda _ + (delete-file "lib/debian/tests/test_deb822.py") + (delete-file "lib/debian/tests/test_debfile.py") + #t))))) + (propagated-inputs + `(("python-six" ,python-six) + ("python-chardet" ,python-chardet))) + (synopsis "Debian package related modules") + (description + ;; XXX: Use @enumerate instead of @itemize to work around + ;; . + "This package provides Python modules that abstract many formats of +Debian-related files, such as: + +@enumerate +@item Debtags information; +@item @file{debian/changelog} files; +@item packages files, pdiffs; +@item control files of single or multiple RFC822-style paragraphs---e.g. + @file{debian/control}, @file{.changes}, @file{.dsc}; +@item Raw @file{.deb} and @file{.ar} files, with (read-only) access to + contained files and meta-information. +@end enumerate\n") + + ;; Modules are either GPLv2+ or GPLv3+. + (license license:gpl3+))) + +(define-public python-nbformat + (package + (name "python-nbformat") + (version "4.4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "nbformat" version)) + (sha256 + (base32 + "00nlf08h8yc4q73nphfvfhxrcnilaqanb8z0mdy6nxk0vzq4wjgp")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) ; no test target + (propagated-inputs + `(("python-ipython-genutils" ,python-ipython-genutils) + ("python-jsonschema" ,python-jsonschema) + ("python-jupyter-core" ,python-jupyter-core) + ("python-traitlets" ,python-traitlets))) + (home-page "http://jupyter.org") + (synopsis "Jupyter Notebook format") + (description "This package provides the reference implementation of the +Jupyter Notebook format and Python APIs for working with notebooks.") + (license license:bsd-3))) + +(define-public python2-nbformat + (package-with-python2 python-nbformat)) + +(define-public python-bleach + (package + (name "python-bleach") + (version "3.1.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "bleach" version)) + (sha256 + (base32 "0jqa8f1ni10cyf4h7sjpf8mbqlcbkyvmsnli77qrxdcxvc7m4k1w")))) + (build-system python-build-system) + (propagated-inputs + `(("python-webencodings" ,python-webencodings) + ("python-six" ,python-six))) + (native-inputs + `(("python-datrie" ,python-datrie) + ("python-genshi" ,python-genshi) + ("python-lxml" ,python-lxml) + ("python-pytest" ,python-pytest))) + (home-page "https://github.com/mozilla/bleach") + (synopsis "Whitelist-based HTML-sanitizing tool") + (description "Bleach is an easy whitelist-based HTML-sanitizing tool.") + (license license:asl2.0))) + +(define-public python2-bleach + (package-with-python2 python-bleach)) + +(define-public python-entrypoints + (package + (name "python-entrypoints") + (version "0.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "entrypoints" version)) + (sha256 + (base32 + "0lc4si3xb7hza424414rdqdc3vng3kcrph8jbvjqb32spqddf3f7")))) + (build-system python-build-system) + ;; The package does not come with a setup.py file, so we have to generate + ;; one ourselves. + (arguments + `(#:tests? #f + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'create-setup.py + (lambda _ + (call-with-output-file "setup.py" + (lambda (port) + (format port "\ +from setuptools import setup +setup(name='entrypoints', version='~a', py_modules=['entrypoints']) +" ,version)))))))) + (home-page "https://github.com/takluyver/entrypoints") + (synopsis "Discover and load entry points from installed Python packages") + (description "Entry points are a way for Python packages to advertise +objects with some common interface. The most common examples are +@code{console_scripts} entry points, which define shell commands by +identifying a Python function to run. The @code{entrypoints} module contains +functions to find and load entry points.") + (license license:expat))) + +(define-public python2-entrypoints + (package-with-python2 python-entrypoints)) + +(define-public python-epc + (package + (name "python-epc") + (version "0.0.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "epc" version)) + (sha256 + (base32 + "09bx1ln1bwa00917dndlgs4k589h8qx2x080xch5m58p92kjwkd1")))) + (build-system python-build-system) + (propagated-inputs + `(("python-sexpdata" ,python-sexpdata))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/tkf/python-epc") + (synopsis "Remote procedure call (RPC) stack for Emacs Lisp and Python") + (description + "Python-EPC can call elisp functions from Python and Python functions +from elisp.") + (license license:gpl3))) + +(define-public python-nbconvert + (package + (name "python-nbconvert") + (version "5.0.0b1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "nbconvert" version)) + (sha256 + (base32 + "0brclbb18l4nmd5qy3dl9wn05rjdh1fz4rmzdlfqacj12rcdvdgp")))) + (build-system python-build-system) + (arguments + `(;; The "bdist_egg" target is disabled by default, causing the installation + ;; to fail. + #:configure-flags (list "bdist_egg") + ;; FIXME: 5 failures, 40 errors. + #:tests? #f)) + ;; #:phases + ;; (modify-phases %standard-phases + ;; (replace 'check + ;; (lambda _ + ;; (zero? (system* "py.test" "-v"))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-bleach" ,python-bleach) + ("python-entrypoints" ,python-entrypoints) + ("python-jinja2" ,python-jinja2) + ("python-jupyter-core" ,python-jupyter-core) + ("python-mistune" ,python-mistune) + ("python-nbformat" ,python-nbformat) + ("python-pygments" ,python-pygments) + ("python-traitlets" ,python-traitlets))) + (home-page "http://jupyter.org") + (synopsis "Converting Jupyter Notebooks") + (description "The @code{nbconvert} tool, @{jupyter nbconvert}, converts +notebooks to various other formats via Jinja templates. It allows you to +convert an @code{.ipynb} notebook file into various static formats including: + +@enumerate +@item HTML +@item LaTeX +@item PDF +@item Reveal JS +@item Markdown (md) +@item ReStructured Text (rst) +@item executable script +@end enumerate\n") + (license license:bsd-3))) + +(define-public python2-nbconvert + (package-with-python2 python-nbconvert)) + +(define-public python-notebook + (package + (name "python-notebook") + (version "5.7.4") + (source (origin + (method url-fetch) + (uri (pypi-uri "notebook" version)) + (sha256 + (base32 + "0jm7324mbxljmn9hgapj66q7swyz5ai92blmr0jpcy0h80x6f26r")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; These tests require a browser + (delete-file-recursively "notebook/tests/selenium") + ;; Some tests need HOME + (setenv "HOME" "/tmp") + ;; This file contains "warningfilters", which are not supported + ;; by this version of nose. + (delete-file "setup.cfg") + (with-directory-excursion "/tmp" + (invoke "nosetests" "-v")) + #t))))) + (propagated-inputs + `(("python-jupyter-core" ,python-jupyter-core) + ("python-nbformat" ,python-nbformat) + ("python-nbconvert" ,python-nbconvert) + ("python-prometheus-client" ,python-prometheus-client) + ("python-send2trash" ,python-send2trash) + ("python-terminado" ,python-terminado))) + (native-inputs + `(("python-nose" ,python-nose) + ("python-sphinx" ,python-sphinx) + ("python-requests" ,python-requests))) + (home-page "http://jupyter.org/") + (synopsis "Web-based notebook environment for interactive computing") + (description + "The Jupyter HTML notebook is a web-based notebook environment for +interactive computing.") + (properties `((python2-variant . ,(delay python2-notebook)))) + (license license:bsd-3))) + +(define-public python2-notebook + (let ((base (package-with-python2 + (strip-python2-variant python-notebook)))) + (package (inherit base) + (native-inputs + `(("python2-mock" ,python2-mock) + ,@(package-native-inputs base))) + (arguments + (substitute-keyword-arguments (package-arguments base) + ((#:phases phases) + `(modify-phases ,phases + (add-before 'check 'disable-test-case + ;; The test requires network access to localhost. Curiously it + ;; fails with Python 2 only. Simply make the test-case return + ;; immediately. + (lambda _ + (substitute* + "notebook/services/nbconvert/tests/test_nbconvert_api.py" + (("formats = self.nbconvert_api") "return #"))))))))))) + +(define-public python-widgetsnbextension + (package + (name "python-widgetsnbextension") + (version "3.5.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "widgetsnbextension" version)) + (sha256 + (base32 + "1ismyaxbv9d56yqqqb8xl58hg0iq0bbyy014a53y1g3hfbc8g7q7")))) + (build-system python-build-system) + (propagated-inputs + `(("python-ipykernel" ,python-ipykernel) + ("python-notebook" ,python-notebook))) + (native-inputs + `(("python-certifi" ,python-certifi) + ("python-nose" ,python-nose))) + (home-page "https://ipython.org") + (synopsis "IPython HTML widgets for Jupyter") + (description "This package provides interactive HTML widgets for Jupyter +notebooks.") + (license license:bsd-3))) + +(define-public python2-widgetsnbextension + (package-with-python2 python-widgetsnbextension)) + +(define-public python-ipywidgets + (package + (name "python-ipywidgets") + (version "7.5.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ipywidgets" version)) + (sha256 + (base32 + "15sww2mvnkqlvx55gwa82v05062a8j1xpncnqna4k9sl53hgcig9")))) + (build-system python-build-system) + (propagated-inputs + `(("python-ipython" ,python-ipython) + ("python-traitlets" ,python-traitlets) + ("python-widgetsnbextension" ,python-widgetsnbextension))) + (native-inputs + `(("python-nose" ,python-nose) + ("python-pytest" ,python-pytest))) + (home-page "https://ipython.org") + (synopsis "IPython HTML widgets for Jupyter") + (description "Ipywidgets are interactive HTML widgets for Jupyter +notebooks and the IPython kernel. Notebooks come alive when interactive +widgets are used. Users gain control of their data and can visualize changes +in the data.") + (license license:bsd-3))) + +(define-public python2-ipywidgets + (package-with-python2 python-ipywidgets)) + +(define-public python-jupyter-console + (package + (name "python-jupyter-console") + (version "6.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jupyter_console" version)) + (sha256 + (base32 + "06s3kr5vx0l1y1b7fxb04dmrppscl7q69sl9yyfr0d057d1ssvkg")))) + (build-system python-build-system) + (propagated-inputs + `(("python-ipykernel" ,python-ipykernel) + ("python-jupyter-client" ,python-jupyter-client) + ("python-prompt-toolkit" ,python-prompt-toolkit-2) + ("python-pygments" ,python-pygments))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://jupyter.org") + (synopsis "Jupyter terminal console") + (description "This package provides a terminal-based console frontend for +Jupyter kernels. It also allows for console-based interaction with non-Python +Jupyter kernels such as IJulia and IRKernel.") + (properties `((python2-variant . ,(delay python2-jupyter-console)))) + (license license:bsd-3))) + +(define-public python2-jupyter-console + (package + (name "python2-jupyter-console") + (version "5.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jupyter_console" version)) + (sha256 + (base32 + "1kam1qzgwr7srhm5r6aj90di5sws4bq0jmiw15452ddamb9yspal")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + #:tests? #f)) ; Tests only run in a TTY. + (propagated-inputs + `(("python2-ipykernel" ,python2-ipykernel) + ("python2-jupyter-client" ,python2-jupyter-client) + ("python2-prompt-toolkit" ,python2-prompt-toolkit-1) + ("python2-pygments" ,python2-pygments))) + (native-inputs + `(("python2-nose" ,python2-nose))) + (home-page "https://jupyter.org") + (synopsis "Jupyter terminal console") + (description "This package provides a terminal-based console frontend for +Jupyter kernels. It also allows for console-based interaction with non-Python +Jupyter kernels such as IJulia and IRKernel.") + (license license:bsd-3))) + +;; The python-ipython and python-jupyter-console require each other. To get +;; the functionality in both packages working, strip down the +;; python-jupyter-console package when using it as an input to python-ipython. +(define python-jupyter-console-minimal + (package + (inherit python-jupyter-console) + (name "python-jupyter-console-minimal") + (arguments + (substitute-keyword-arguments + (package-arguments python-jupyter-console) + ((#:phases phases) + `(modify-phases ,phases + (add-after 'install 'delete-bin + (lambda* (#:key outputs #:allow-other-keys) + ;; Delete the bin files, to avoid conflicts in profiles + ;; where python-ipython and python-jupyter-console are + ;; both present. + (delete-file-recursively + (string-append + (assoc-ref outputs "out") "/bin")))))))) + ;; Remove the python-ipython propagated input, to avoid the cycle + (propagated-inputs + (alist-delete + "python-ipython" + (package-propagated-inputs python-jupyter-console))))) + +(define-public python-qtconsole + (package + (name "python-qtconsole") + (version "4.4.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "qtconsole" version)) + (sha256 + (base32 + "1b03n1ixzscm0jw97l4dq5iy4fslnqxq5bb8287xb7n2a1gs26xw")))) + (build-system python-build-system) + (arguments + ;; XXX: Tests are disabled, because this package needs python-ipython 7, + ;; but we only have the LTS version 5.x. This means that there might be + ;; runtime errors, but since this is a dependency of the Jupyter package, + ;; and Jupyter can be used without the qtconsole we can overlook this for + ;; now. + `(#:tests? #f + #:phases + (modify-phases %standard-phases + (add-before 'check 'pre-check + (lambda _ + (setenv "QT_QPA_PLATFORM" "offscreen") + #t))))) + (propagated-inputs + `(("python-ipykernel" ,python-ipykernel) + ("python-ipython" ,python-ipython))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "http://jupyter.org") + (synopsis "Jupyter Qt console") + (description "This package provides a Qt-based console for Jupyter with +support for rich media output.") + (license license:bsd-3))) + +(define-public python-jsbeautifier + (package + (name "python-jsbeautifier") + (version "1.10.2") + (home-page "https://github.com/beautify-web/js-beautify") + (source (origin + (method git-fetch) + (uri (git-reference + (url home-page) + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0wawb070ki1axb3jc9xvsrgpji52vcfif3zmjzc3z4g98m5xw4kg")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (add-after 'unpack 'chdir + (lambda _ + ;; The upstream Git repository contains all the code, + ;; but this package only builds the python code. + (chdir "python") + #t)) + (add-after 'unpack 'patch-python-six-requirements + (lambda _ + (substitute* "python/setup.py" + (("six>=1.12.0") + "six>=1.11.0")) + #t))))) + (propagated-inputs + `(("python-editorconfig" ,python-editorconfig) + ("python-six" ,python-six))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (synopsis "JavaScript unobfuscator and beautifier") + (description "Beautify, unpack or deobfuscate JavaScript, leveraging +popular online obfuscators.") + (license license:expat))) + +(define-public jupyter + (package + (name "jupyter") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jupyter" version)) + (sha256 + (base32 + "0pwf3pminkzyzgx5kcplvvbvwrrzd3baa7lmh96f647k30rlpp6r")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; there are none. + (propagated-inputs + `(("python-ipykernel" ,python-ipykernel) + ("python-ipywidgets" ,python-ipywidgets) + ("python-jupyter-console" ,python-jupyter-console) + ("python-nbconvert" ,python-nbconvert) + ("python-notebook" ,python-notebook) + ("python-qtconsole" ,python-qtconsole))) + (native-search-paths + (list (search-path-specification + (variable "JUPYTER_PATH") + (files '("share/jupyter"))))) + (home-page "https://jupyter.org") + (synopsis "Web application for interactive documents") + (description + "The Jupyter Notebook is a web application that allows you to create and +share documents that contain live code, equations, visualizations and +explanatory text. Uses include: data cleaning and transformation, numerical +simulation, statistical modeling, machine learning and much more.") + (license license:bsd-3))) + +(define-public python-chardet + (package + (name "python-chardet") + (version "3.0.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "chardet" version)) + (sha256 + (base32 + "1bpalpia6r5x1kknbk11p1fzph56fmmnp405ds8icksd3knr5aw4")))) + (native-inputs + `(("python-hypothesis" ,python-hypothesis) + ("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner))) + (build-system python-build-system) + ;; XXX: Incompatible with Pytest 4: . + (arguments `(#:tests? #f)) + (home-page "https://github.com/chardet/chardet") + (synopsis "Universal encoding detector for Python 2 and 3") + (description + "This package provides @code{chardet}, a Python module that can +automatically detect a wide range of file encodings.") + (license license:lgpl2.1+))) + +(define-public python2-chardet + (package-with-python2 python-chardet)) + +(define-public python-docopt + (package + (name "python-docopt") + (version "0.6.2") + (source + (origin + (method git-fetch) + ;; The release on PyPI does not include tests. + (uri (git-reference + (url "https://github.com/docopt/docopt") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0aad9gbswnnhssin2q0m5lmpm0ahyf80ahs2zjigbn5y7fvljnd0")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (invoke "py.test")))))) + (home-page "http://docopt.org") + (synopsis "Command-line interface description language for Python") + (description "This library allows the user to define a command-line +interface from a program's help message rather than specifying it +programmatically with command-line parsers like @code{getopt} and +@code{argparse}.") + (license license:expat))) + +(define-public python2-docopt + (package-with-python2 python-docopt)) + +(define-public python-pythondialog + (package + (name "python-pythondialog") + (version "3.4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pythondialog" version)) + (sha256 + (base32 + "1728ghsran47jczn9bhlnkvk5bvqmmbihabgif5h705b84r1272c")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-path + (lambda* (#:key inputs #:allow-other-keys) + (let* ((dialog (assoc-ref inputs "dialog"))) + ;; Since this library really wants to grovel the search path, we + ;; must hardcode dialog's store path into it. + (substitute* "dialog.py" + (("os.getenv\\(\"PATH\", \":/bin:/usr/bin\"\\)") + (string-append "os.getenv(\"PATH\") + \":" dialog "/bin\""))) + #t)))) + #:tests? #f)) ; no test suite + (propagated-inputs + `(("dialog" ,dialog))) + (home-page "http://pythondialog.sourceforge.net/") + (synopsis "Python interface to the UNIX dialog utility") + (description "A Python wrapper for the dialog utility. Its purpose is to +provide an easy to use, pythonic and comprehensive Python interface to dialog. +This allows one to make simple text-mode user interfaces on Unix-like systems") + (license license:lgpl2.1) + (properties `((python2-variant . ,(delay python2-pythondialog)))))) + +(define-public python2-pythondialog + (let ((base (package-with-python2 (strip-python2-variant python-pythondialog)))) + (package + (inherit base) + (version (package-version python-pythondialog)) + (source (origin + (method url-fetch) + (uri (pypi-uri "python2-pythondialog" version)) + (sha256 + (base32 + "0d8k7lxk50imdyx85lv8j98i4c93a71iwpapnl1506rpkbm9qvd9"))))))) + +(define-public python-configobj + (package + (name "python-configobj") + (version "5.0.6") + (source (origin + (method url-fetch) + (uri (pypi-uri "configobj" version)) + (sha256 + (base32 + "00h9rcmws03xvdlfni11yb60bz3kxfvsj6dg6nrpzj71f03nbxd2")) + ;; Patch setup.py so it looks for python-setuptools, which is + ;; required to parse the keyword 'install_requires' in setup.py. + (patches (search-patches "python-configobj-setuptools.patch")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six))) + (synopsis "Config file reading, writing and validation") + (description "ConfigObj is a simple but powerful config file reader and +writer: an ini file round tripper. Its main feature is that it is very easy to +use, with a straightforward programmer’s interface and a simple syntax for +config files.") + (home-page "https://github.com/DiffSK/configobj") + (license license:bsd-3))) + +(define-public python2-configobj + (package-with-python2 python-configobj)) + +(define-public python-configargparse + (package + (name "python-configargparse") + (version "0.14.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "ConfigArgParse" version)) + (sha256 + (base32 + "149fy4zya0rsnlkvxbbq43cyr8lscb5k4pj1m6n7f1grwcmzwbif")))) + (build-system python-build-system) + (native-inputs + `(("python-pyyaml" ,python-pyyaml))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; Bypass setuptools-shim because one test relies on "setup.py" + ;; being the first argument passed to the python call. + ;; + ;; NOTE: Many tests do not run because they rely on Python's + ;; built-in test.test_argparse, but we remove the unit tests from + ;; our Python installation. + (invoke "python" "setup.py" "test")))))) + (synopsis "Replacement for argparse") + (description "A drop-in replacement for argparse that allows options to also +be set via config files and/or environment variables.") + (home-page "https://github.com/bw2/ConfigArgParse") + (license license:expat))) + +(define-public python2-configargparse + (package-with-python2 python-configargparse)) + +(define-public python-argparse-manpage + (package + (name "python-argparse-manpage") + (version "1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "argparse-manpage" version)) + (sha256 + (base32 + "0blh31zns68anina9lba5wh81d1414s97p60zw5l0d0shhh0wj5p")))) + (build-system python-build-system) + (home-page "https://github.com/praiskup/argparse-manpage") + (synopsis "Build manual page from Python's ArgumentParser object") + (description + "This package provides tools to build manual pages from Python's +@code{ArgumentParser} object.") + (license license:asl2.0))) + +(define-public python-contextlib2 + (package + (name "python-contextlib2") + (version "0.6.0.post1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "contextlib2" version)) + (sha256 + (base32 + "0bhnr2ac7wy5l85ji909gyljyk85n92w8pdvslmrvc8qih4r1x01")))) + (build-system python-build-system) + (home-page "https://contextlib2.readthedocs.org/") + (synopsis "Tools for decorators and context managers") + (description "This module is primarily a backport of the Python +3.2 contextlib to earlier Python versions. Like contextlib, it +provides utilities for common tasks involving decorators and context +managers. It also contains additional features that are not part of +the standard library.") + (properties `((python2-variant . ,(delay python2-contextlib2)))) + (license license:psfl))) + +(define-public python2-contextlib2 + (let ((base (package-with-python2 + (strip-python2-variant python-contextlib2)))) + (package + (inherit base) + (arguments + (substitute-keyword-arguments (package-arguments base) + ((#:phases phases) + `(modify-phases ,phases + (replace 'check + (lambda _ (invoke "python" "test_contextlib2.py" "-v"))))))) + (native-inputs + `(("python2-unittest2" ,python2-unittest2)))))) + +;; This package is used by python2-pytest via python2-importlib-metadata, +;; and thus can not depend on python-unittest2 (which depends on pytest). +(define-public python2-contextlib2-bootstrap + (hidden-package + (package/inherit + python2-contextlib2 + (name "python2-contextlib2-bootstrap") + (arguments + `(#:tests? #f + ,@(package-arguments python2-contextlib2))) + (native-inputs '())))) + +(define-public python-texttable + (package + (name "python-texttable") + (version "1.6.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "texttable" version)) + (sha256 + (base32 + "1x5l77akfc20x52jma9573qp8l8r07q103pm4l0pbizvh4vp1wzg")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (invoke "pytest" "tests.py")))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/foutaise/texttable/") + (synopsis "Python module for creating simple ASCII tables") + (description "Texttable is a Python module for creating simple ASCII +tables.") + (license license:expat))) + +(define-public python2-texttable + (package-with-python2 python-texttable)) + +(define-public python-atomicwrites + (package + (name "python-atomicwrites") + (version "1.3.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "atomicwrites" version)) + (sha256 + (base32 + "19ngcscdf3jsqmpcxn6zl5b6anmsajb6izp1smcd1n02midl9abm")))) + (build-system python-build-system) + (synopsis "Atomic file writes in Python") + (description "Library for atomic file writes using platform dependent tools +for atomic file system operations.") + (home-page "https://github.com/untitaker/python-atomicwrites") + (license license:expat))) + +(define-public python2-atomicwrites + (package-with-python2 python-atomicwrites)) + +(define-public python-click-threading + (package + (name "python-click-threading") + (version "0.4.4") + (source (origin + (method url-fetch) + (uri (pypi-uri "click-threading" version)) + (sha256 + (base32 + "1rsxc2fbkxlhwhlmxsdjzq3spn284l6rvjfcz9mbb17ibgdgmc5j")))) + (build-system python-build-system) + (propagated-inputs + `(("python-click" ,python-click))) + (synopsis "Utilities for multithreading in Click") + (description "This package provides utilities for multithreading in Click +applications.") + (home-page "https://github.com/click-contrib/click-threading") + (license license:expat))) + +(define-public python-click-log + (package + (name "python-click-log") + (version "0.3.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "click-log" version)) + (sha256 + (base32 + "091i03bhxyzsdbc6kilxhivfda2f8ymz3b33xa6cj5kbzjiirz8n")))) + (build-system python-build-system) + (propagated-inputs + `(("python-click" ,python-click))) + (synopsis "Logging for click applications") + (description "This package provides a Python library for logging Click +applications.") + (home-page "https://github.com/click-contrib/click-log") + (license license:expat))) + +(define-public python-apipkg + (package + (name "python-apipkg") + (version "1.5") + (source (origin + (method url-fetch) + (uri (pypi-uri "apipkg" version)) + (sha256 + (base32 + "1xhak74yj3lqflvpijg15rnkklrigvsp5q7s4as4h6a157d8q8ip")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-setuptools-scm" ,python-setuptools-scm))) + (synopsis "Namespace control and lazy-import mechanism") + (description "With apipkg you can control the exported namespace of a Python +package and greatly reduce the number of imports for your users. It is a small +pure Python module that works on virtually all Python versions.") + (home-page "https://github.com/pytest-dev/apipkg") + (license license:expat))) + +(define-public python-execnet + (package + (name "python-execnet") + (version "1.4.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "execnet" version)) + (sha256 + (base32 + "1rpk1vyclhg911p3hql0m0nrpq7q7mysxnaaw6vs29cpa6kx8vgn")))) + (build-system python-build-system) + (arguments + `(;; 2 failed, 275 passed, 670 skipped, 4 xfailed + ;; The two test failures are caused by the lack of an `ssh` executable. + ;; The test suite can be run with pytest after the 'install' phase. + #:tests? #f)) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-setuptools-scm" ,python-setuptools-scm))) + (propagated-inputs + `(("python-apipkg" ,python-apipkg))) + (synopsis "Rapid multi-Python deployment") + (description "Execnet provides a share-nothing model with +channel-send/receive communication for distributing execution across many +Python interpreters across version, platform and network barriers. It has a +minimal and fast API targeting the following uses: +@enumerate +@item distribute tasks to (many) local or remote CPUs +@item write and deploy hybrid multi-process applications +@item write scripts to administer multiple environments +@end enumerate") + (home-page "https://codespeak.net/execnet/") + (license license:expat))) + +(define-public python2-execnet + (package-with-python2 python-execnet)) + +(define-public python-icalendar + (package + (name "python-icalendar") + (version "4.0.5") + (source (origin + (method url-fetch) + (uri (pypi-uri "icalendar" version)) + (sha256 + (base32 + "14ynjj65kfmlcvpb7k097w789wvxncd3cr3xz5m1jz9yl9v6vv5q")))) + (build-system python-build-system) + (propagated-inputs + `(("python-dateutil" ,python-dateutil) + ("python-pytz" ,python-pytz))) + (synopsis "Python library for parsing iCalendar files") + (description "The icalendar package is a parser/generator of iCalendar +files for use with Python.") + (home-page "https://github.com/collective/icalendar") + (license license:bsd-2))) + +(define-public python-args + (package + (name "python-args") + (version "0.1.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "args" version)) + (sha256 + (base32 + "057qzi46h5dmxdqknsbrssn78lmqjlnm624iqdhrnpk26zcbi1d7")))) + (build-system python-build-system) + (home-page "https://github.com/kennethreitz/args") + (synopsis "Command-line argument parser") + (description + "This library provides a Python module to parse command-line arguments.") + (license license:bsd-3))) + +(define-public python2-args + (package-with-python2 python-args)) + +(define-public python-clint + (package + (name "python-clint") + (version "0.5.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "clint" version)) + (sha256 + (base32 + "1an5lkkqk1zha47198p42ji3m94xmzx1a03dn7866m87n4r4q8h5")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (invoke "py.test" "-v")))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-args" ,python-args))) + (home-page "https://github.com/kennethreitz/clint") + (synopsis "Command-line interface tools") + (description + "Clint is a Python module filled with a set of tools for developing +command-line applications, including tools for colored and indented +output, progress bar display, and pipes.") + (license license:isc))) + +(define-public python2-clint + (package-with-python2 python-clint)) + +(define-public python-rply + (package + (name "python-rply") + (version "0.7.5") + (source (origin + (method url-fetch) + (uri (pypi-uri "rply" version)) + (sha256 + (base32 + "0lv428895zxsz43968qx0q9bimwqnfykndz4dpjbq515w2gvzhjh")))) + (build-system python-build-system) + (propagated-inputs + `(("python-appdirs" ,python-appdirs))) + (home-page "https://github.com/alex/rply") + (synopsis "Parser generator for Python") + (description + "This package provides a pure Python based parser generator, that also +works with RPython. It is a more-or-less direct port of David Bazzley's PLY, +with a new public API, and RPython support.") + (license license:bsd-3))) + +(define-public python2-rply + (package-with-python2 python-rply)) + +(define-public python-hy + (package + (name "python-hy") + (version "0.18.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "hy" version)) + (sha256 + (base32 + "04dfwm336gw61fmgwikvh0cnxk682p19b4w555wl5d7mlym4rwj2")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-before 'install 'set-HOME + (lambda _ + (setenv "HOME" "/tmp") #t)) + (replace 'check + (lambda _ + ;; Tests require write access to HOME. + (setenv "HOME" "/tmp") + (invoke "nosetests")))))) + (native-inputs + `(("python-coverage" ,python-coverage) + ("python-nose" ,python-nose))) + (propagated-inputs + `(("python-astor" ,python-astor) + ("python-colorama" ,python-colorama) + ("python-rply" ,python-rply) + ("python-funcparserlib" + ,python-funcparserlib))) + (home-page "http://hylang.org/") + (synopsis "Lisp frontend to Python") + (description + "Hy is a dialect of Lisp that's embedded in Python. Since Hy transforms +its Lisp code into the Python Abstract Syntax Tree, you have the whole world of +Python at your fingertips, in Lisp form.") + (license license:expat))) + +(define-public python2-functools32 + (package + (name "python2-functools32") + (version "3.2.3-2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "functools32" version)) + (sha256 + (base32 + "0v8ya0b58x47wp216n1zamimv4iw57cxz3xxhzix52jkw3xks9gn")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + #:tests? #f)) ; no test target + (home-page "https://github.com/MiCHiLU/python-functools32") + (synopsis + "Backport of the functools module from Python 3.2.3") + (description + "This package is a backport of the @code{functools} module from Python +3.2.3 for use with older versions of Python and PyPy.") + (license license:expat))) + +(define-public python2-subprocess32 + (package + (name "python2-subprocess32") + (version "3.2.7") + (source (origin + (method url-fetch) + (uri (pypi-uri "subprocess32" version)) + (sha256 + (base32 + "14350dhhlhyz5gqzi3lihn9m6lvskx5mcb20srx1kgsk9i50li8y")) + (patches + (search-patches "python2-subprocess32-disable-input-test.patch")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + ;; The test suite fails with Python > 2.7.13: + ;; import test.support + ;; ImportError: No module named support + #:tests? #f + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-/bin/sh + (lambda _ + (substitute* '("subprocess32.py" + "test_subprocess32.py") + (("/bin/sh") (which "sh"))) + #t))))) + (home-page "https://github.com/google/python-subprocess32") + (synopsis "Backport of the subprocess module from Python 3.2") + (description + "This is a backport of the @code{subprocess} standard library module +from Python 3.2 and 3.3 for use on Python 2. It includes bugfixes and some +new features. On POSIX systems it is guaranteed to be reliable when used +in threaded applications. It includes timeout support from Python 3.3 but +otherwise matches 3.2’s API.") + (license license:psfl))) + +(define-public python2-futures + (package + (name "python2-futures") + (version "3.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "futures" version)) + (sha256 + (base32 + "0rdjmmsab550kxsssdq49jcniz77zlkpw4pvi9hvib3lsskjmh4y")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "python" "test_futures.py") + #t))))) + (home-page "https://github.com/agronholm/pythonfutures") + (synopsis + "Backport of the concurrent.futures package from Python 3.2") + (description + "The concurrent.futures module provides a high-level interface for +asynchronously executing callables. This package backports the +concurrent.futures package from Python 3.2") + (license license:bsd-3))) + +(define-public python-promise + (package + (name "python-promise") + (version "0.4.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "promise" version)) + (sha256 + (base32 + "1k19ms8l3d5jzjh557rgkxb5sg4mqgfc315rn4hx1z3n8qq6lr3h")))) + (build-system python-build-system) + ;; Tests wants python-futures, which is a python2 only program, and + ;; can't be found by python-promise at test time. + (arguments `(#:tests? #f)) + (home-page "https://github.com/syrusakbary/promise") + (synopsis "Promises/A+ implementation for Python") + (description + "Promises/A+ implementation for Python") + (properties `((python2-variant . ,(delay python2-promise)))) + (license license:expat))) + +(define-public python2-promise + (let ((promise (package-with-python2 + (strip-python2-variant python-promise)))) + (package (inherit promise) + (arguments (substitute-keyword-arguments (package-arguments promise) + ((#:tests? _) #t))) + (native-inputs + `(("python2-futures" ,python2-futures) + ("python2-pytest" ,python2-pytest) + ,@(package-native-inputs promise)))))) + +(define-public python-progressbar2 + (package + (name "python-progressbar2") + (version "3.51.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "progressbar2" version)) + (sha256 + (base32 + "0b2v3mim90rmfvixkaniz2qrs650sk230rzgd5zhcjfldmlqgxpc")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six) + ("python-utils" ,python-utils))) + (native-inputs + `(("python-flake8" ,python-flake8) + ("python-freezegun" ,python-freezegun) + ("python-pycodestyle" ,python-pycodestyle) + ("python-pytest" ,python-pytest) + ("python-pytest-cache" ,python-pytest-cache) + ("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-flakes" ,python-pytest-flakes) + ("python-pytest-pep8" ,python-pytest-pep8) + ("python-sphinx" ,python-sphinx))) + (home-page "https://github.com/WoLpH/python-progressbar") + (synopsis "Text progress bar library for Python") + (description + "This package provides a Python progressbar library to provide +visual (yet text based) progress to long running operations.") + (license license:bsd-3))) + +(define-public python-progressbar33 + (package + (name "python-progressbar33") + (version "2.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "progressbar33" version)) + (sha256 + (base32 + "1zvf6zs5hzrc03p9nfs4p16vhilqikycvv1yk0pxn8s07fdhvzji")))) + (build-system python-build-system) + (home-page "https://github.com/germangh/python-progressbar") + (synopsis "Text progress bar library for Python") + (description + "This package provides a text progress bar library for Python. This +version only differs from the original @code{progressbar} package in that it +uses relative package imports instead of absolute imports, which is necessary +for the module to work under Python 3.3.") + ;; Either or both of these licenses may be selected. + (license (list license:lgpl2.1+ license:bsd-3)))) + +(define-public python-colorama + (package + (name "python-colorama") + (version "0.4.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "colorama" version)) + (sha256 + (base32 + "189n8hpijy14jfan4ha9f5n06mnl33cxz7ay92wjqgkr639s0vg9")))) + (build-system python-build-system) + (synopsis "Colored terminal text rendering for Python") + (description "Colorama is a Python library for rendering colored terminal +text.") + (home-page "https://pypi.org/project/colorama/") + (license license:bsd-3))) + +(define-public python2-colorama + (package-with-python2 python-colorama)) + +(define-public python-rsa + (package + (name "python-rsa") + (version "3.4.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rsa" version)) + (sha256 + (base32 + "1dcxvszbikgzh99ybdc7jq0zb9wspy2ds8z9mjsqiyv3q884xpr5")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pyasn1" ,python-pyasn1))) + (synopsis "Pure-Python RSA implementation") + (description "Python-RSA is a pure-Python RSA implementation. It supports +encryption and decryption, signing and verifying signatures, and key +generation according to PKCS#1 version 1.5. It can be used as a Python +library as well as on the command line.") + (home-page "https://stuvel.eu/rsa") + (license license:asl2.0))) + +(define-public python2-rsa + (package-with-python2 python-rsa)) + +(define-public python-pluggy + (package + (name "python-pluggy") + (version "0.13.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pluggy" version)) + (sha256 + (base32 + "1c35qyhvy27q9ih9n899f3h4sdnpgq027dbiilly2qb5cvgarchm")))) + (build-system python-build-system) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm))) + (synopsis "Plugin and hook calling mechanism for Python") + (description "Pluggy is an extraction of the plugin manager as used by +Pytest but stripped of Pytest specific details.") + (home-page "https://pypi.org/project/pluggy/") + (properties `((python2-variant . ,(delay python2-pluggy)))) + (license license:expat))) + +(define-public python2-pluggy + (let ((base (package-with-python2 (strip-python2-variant + python-pluggy)))) + (package/inherit + base + (propagated-inputs + `(("python-importlib-metadata" ,python2-importlib-metadata)))))) + +;; This package requires python2-importlib-metadata, but that package +;; ends up needing python2-pluggy via python2-pytest, so we need this +;; variant to solve the circular dependency. +(define-public python2-pluggy-bootstrap + (hidden-package + (package/inherit + python2-pluggy + (name "python2-pluggy-bootstrap") + (arguments + `(#:tests? #f + ,@(package-arguments python2-pluggy))) + (propagated-inputs + `(("python-importlib-metadata" ,python2-importlib-metadata-bootstrap)))))) + +(define-public python-tox + (package + (name "python-tox") + (version "2.8.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "tox" version)) + (sha256 + (base32 + "1drp6mwm8wdypjym15ia8lwjxbhcksb9vzxg4ay5dh4ji57by2ny")))) + (build-system python-build-system) + (arguments + ;; FIXME: Tests require pytest-timeout, which itself requires + ;; pytest>=2.8.0 for installation. + '(#:tests? #f)) + (propagated-inputs + `(("python-pluggy" ,python-pluggy) ; >=0.3.0,<0.4.0 + ("python-py" ,python-py) + ("python-virtualenv" ,python-virtualenv))) + (native-inputs + `(; FIXME: Missing: ("python-pytest-timeout" ,python-pytest-timeout) + ("python-pytest" ,python-pytest) ; >= 2.3.5 + ("python-setuptools-scm" ,python-setuptools-scm))) + (home-page "https://tox.readthedocs.io") + (synopsis "Virtualenv-based automation of test activities") + (description "Tox is a generic virtualenv management and test command line +tool. It can be used to check that a package installs correctly with +different Python versions and interpreters, or run tests in each type of +supported environment, or act as a frontend to continuous integration +servers.") + (license license:expat))) + +(define-public python2-tox + (package-with-python2 python-tox)) + +(define-public python-jmespath + (package + (name "python-jmespath") + (version "0.9.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jmespath" version)) + (sha256 + (base32 + "0k0765x1mybcrzajh3hiqkl8sy9hs0bmn4900frxy0j3ykvaxqmx")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose))) + (synopsis "JSON Matching Expressions") + (description "JMESPath (pronounced “james path”) is a Python library that +allows one to declaratively specify how to extract elements from a JSON +document.") + (home-page "https://github.com/jmespath/jmespath.py") + (license license:expat))) + +(define-public python2-jmespath + (package-with-python2 python-jmespath)) + +(define-public python-symengine + (package + (name "python-symengine") + (version "0.6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "symengine" version)) + (sha256 + (base32 "1kn1w4dp9mrsq6kzmhf4pjmx3wicxc3dw1mwa924q8g48g77lr4c")))) + (build-system python-build-system) + (native-inputs + `(("cmake" ,cmake) + ("python-cython" ,python-cython))) + (inputs + `(("symengine" ,symengine))) + (home-page "https://github.com/symengine/symengine.py") + (synopsis "Python library providing wrappers to SymEngine") + (description + "This library provides a Python wrapper to SymEngine, a fast C++ symbolic +manipulation library.") + (license license:expat))) + +(define-public python-botocore + (package + (name "python-botocore") + (version "1.15.26") + (source + (origin + (method url-fetch) + (uri (pypi-uri "botocore" version)) + (sha256 + (base32 + "1a87pbwkk5vlwz92hy1wizfnpiwn11bhaicr6bmji1i5ybwdhnr8")))) + (build-system python-build-system) + (arguments + ;; FIXME: Many tests are failing. + '(#:tests? #f)) + (propagated-inputs + `(("python-dateutil" ,python-dateutil) + ("python-docutils" ,python-docutils) + ("python-jmespath" ,python-jmespath))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-nose" ,python-nose) + ("behave" ,behave) + ("python-tox" ,python-tox) + ("python-urllib3" ,python-urllib3) + ("python-wheel" ,python-wheel))) + (home-page "https://github.com/boto/botocore") + (synopsis "Low-level interface to AWS") + (description "Botocore is a Python library that provides a low-level +interface to the Amazon Web Services (AWS) API.") + (license license:asl2.0))) + +(define-public python2-botocore + (package-with-python2 python-botocore)) + +(define-public python-pyfiglet + (package + (name "python-pyfiglet") + (version "0.8.post1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyfiglet" version)) + (sha256 + (base32 + "0f9n2076ga2ccsg174k2d7n0z4d44ml96yzc72s6g4nhalbk5hn6")))) + (build-system python-build-system) + (home-page "https://github.com/pwaller/pyfiglet") + (synopsis "Draw ASCII art big letters in Python") + (description "This module lets you draw large letter from ordinary characters +in pure Python.") + (license license:expat))) + +(define-public python-xdo + (package + (name "python-xdo") + (version "0.3") + (source (origin + (method url-fetch) + (uri (string-append + "http://http.debian.net/debian/pool/main/p/python-xdo/" + "python-xdo_" version ".orig.tar.gz")) + (sha256 + (base32 + "1vqh1n5yy5dhnq312kwrl90fnck4v26is3lq3lxdvcn60vv19da0")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-before 'install 'patch-libxdo-path + ;; Hardcode the path of dynamically loaded libxdo library. + (lambda* (#:key inputs #:allow-other-keys) + (let ((libxdo (string-append + (assoc-ref inputs "xdotool") + "/lib/libxdo.so"))) + (substitute* "xdo/_xdo.py" + (("find_library\\(\"xdo\"\\)") + (simple-format #f "\"~a\"" libxdo))) + #t)))) + #:tests? #f)) ; no tests provided + (propagated-inputs + `(("python-six" ,python-six))) + (inputs + `(("xdotool" ,xdotool) + ("libX11" ,libx11))) + (home-page "https://tracker.debian.org/pkg/python-xdo") + (synopsis "Python library for simulating X11 keyboard/mouse input") + (description "Provides bindings to libxdo for manipulating X11 via simulated +input. (Note that this is mostly a legacy library; you may wish to look at +python-xdo for newer bindings.)") + (license license:bsd-3))) + +(define-public python2-xdo + (package-with-python2 python-xdo)) + +(define-public python-mako + (package + (name "python-mako") + (version "1.1.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Mako" version)) + (sha256 + (base32 + "17bd6r9ynp4hyfckkia0bb8gpd98f42jfl5rmzdpbld59bbcaf9i")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (if tests? + (invoke "nosetests" "-v") + (format #t "test suite not run~%")) + #t))))) + (propagated-inputs + `(("python-markupsafe" ,python-markupsafe))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-nose" ,python-nose))) + (home-page "https://www.makotemplates.org/") + (synopsis "Templating language for Python") + (description "Mako is a templating language for Python that compiles +templates into Python modules.") + (license license:expat))) + +(define-public python2-mako + (package-with-python2 python-mako)) + +(define-public python-waitress + (package + (name "python-waitress") + (version "1.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "waitress" version)) + (patches (search-patches "python-waitress-fix-tests.patch")) + (sha256 + (base32 + "1a85gyji0kajc3p0s1pwwfm06w4wfxjkvvl4rnrz3h164kbd6g6k")))) + (build-system python-build-system) + (home-page "https://github.com/Pylons/waitress") + (synopsis "Waitress WSGI server") + (description "Waitress is meant to be a production-quality pure-Python WSGI +server with very acceptable performance.") + (license license:zpl2.1))) + +(define-public python2-waitress + (package-with-python2 python-waitress)) + +(define-public python-whichcraft + (package + (name "python-whichcraft") + (version "0.6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "whichcraft" version)) + (sha256 + (base32 + "11yfkzyplizdgndy34vyd5qlmr1n5mxis3a3svxmx8fnccdvknxc")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/pydanny/whichcraft") + (synopsis "Cross-platform cross-python shutil.which functionality") + (description + "This package provides a shim of the shutil.which function that's +designed to work across multiple versions of Python.") + (license license:bsd-3))) + +(define-public python-cookiecutter + (package + (name "python-cookiecutter") + (version "1.7.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cookiecutter" version)) + (sha256 + (base32 + "1b2xa5dypk1vf8aq599fd8zw4y0pwvq3hgl7ia8aiv8gg3ab5dpg")))) + (build-system python-build-system) + (native-inputs + `(("python-freezegun" ,python-freezegun) + ("python-pytest" ,python-pytest) + ("python-pytest-catchlog" ,python-pytest-catchlog) + ("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-mock" ,python-pytest-mock))) + (propagated-inputs + `(("python-binaryornot" ,python-binaryornot) + ("python-click" ,python-click) + ("python-future" ,python-future) + ("python-jinja2" ,python-jinja2) + ("python-jinja2-time" ,python-jinja2-time) + ("python-poyo" ,python-poyo) + ("python-requests" ,python-requests) + ("python-slugify" ,python-slugify) + ("python-text-unidecode" ,python-text-unidecode) + ("python-whichcraft" ,python-whichcraft))) + (home-page "https://github.com/cookiecutter/cookiecutter") + (synopsis + "Command-line utility that creates projects from project templates") + (description + "This package provides a command-line utility that creates projects from +project templates, e.g. creating a Python package project from a Python package +project template.") + (license license:bsd-3))) + +(define-public python-pyquery + (package + (name "python-pyquery") + (version "1.2.17") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyquery" version)) + (sha256 + (base32 + "1xia20wm0vx5dk85kcwgh13bylz8qh47ffjxssd2586r60xi783a")))) + (build-system python-build-system) + (native-inputs + `(("python-webob" ,python-webob) + ("python-webtest" ,python-webtest))) + (propagated-inputs + `(("python-lxml" ,python-lxml) + ("python-cssselect" ,python-cssselect))) + (home-page "https://github.com/gawel/pyquery") + (synopsis "Make jQuery-like queries on xml documents") + (description "pyquery allows you to make jQuery queries on xml documents. +The API is as much as possible the similar to jQuery. pyquery uses lxml for +fast xml and html manipulation.") + (license license:bsd-3))) + +(define-public python-anyjson + (package + (name "python-anyjson") + (version "0.3.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "anyjson" version)) + (sha256 + (base32 + "1fjph4alvcscsl5d4b6qpv1yh31jy05jxi1l0xff7lws7j32v09p")))) + (build-system python-build-system) + (arguments + `(;; We could possibly get tests working, but on Python 3 it's not so easy. + ;; Very strangely, 2to3 is run *during setup.py install* (or bdist, or + ;; whatever) so this transformation needs to be done before the tests + ;; can be run. Maybe we could add a build step to transform beforehand + ;; but it could be annoying/difficult. + ;; We can enable tests for the Python 2 version, though, and do below. + #:tests? #f)) + (home-page "https://bitbucket.org/runeh/anyjson/") + (synopsis + "Wraps best available JSON implementation in a common interface") + (description + "Anyjson loads whichever is the fastest JSON module installed +and provides a uniform API regardless of which JSON implementation is used.") + (license license:bsd-3) + (properties `((python2-variant . ,(delay python2-anyjson)))))) + +(define-public python2-anyjson + (let ((anyjson (package-with-python2 + (strip-python2-variant python-anyjson)))) + (package + (inherit anyjson) + (arguments `(;; Unlike the python 3 variant, we do run tests. See above! + #:tests? #t + ,@(package-arguments anyjson))) + (native-inputs `(("python2-nose" ,python2-nose)))))) + +(define-public python-amqp + (package + (name "python-amqp") + (version "2.3.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "amqp" version)) + (sha256 + (base32 + "1sv600dgqwpimr6i1g59y9hpn50mc236gdqkr7zin13kvlpx0g87")))) + (build-system python-build-system) + (native-inputs + `(("python-case" ,python-case) + ("python-pytest-sugar" ,python-pytest-sugar) + ("python-mock" ,python-mock))) + (propagated-inputs + `(("python-vine" ,python-vine))) + (home-page "https://github.com/celery/py-amqp") + (synopsis + "Low-level AMQP client for Python (fork of amqplib)") + (description + "This is a fork of amqplib which was originally written by Barry Pederson. +It is maintained by the Celery project, and used by kombu as a pure python +alternative when librabbitmq is not available.") + (license license:lgpl2.1+) + (properties `((python2-variant . ,(delay python2-amqp)))))) + +(define-public python2-amqp + (let ((amqp (package-with-python2 + (strip-python2-variant python-amqp)))) + (package + (inherit amqp) + (arguments `(;; Tries to run coverage tests with nose-cover3, which seems + ;; unmaintained. Weirdly, does not do this on the python 3 + ;; version? + #:tests? #f + ,@(package-arguments amqp)))))) + +(define-public python-txamqp + (package + (name "python-txamqp") + (version "0.8.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "txAMQP" version)) + (sha256 + (base32 + "0jd9864k3csc06kipiwzjlk9mq4054s8kzk5q1cfnxj8572s4iv4")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six) + ("python-twisted" ,python-twisted))) + (home-page "https://github.com/txamqp/txamqp") + (synopsis "Communicate with AMQP peers and brokers using Twisted") + (description + "This package provides a Python library for communicating with AMQP peers +and brokers using the asynchronous networking framework Twisted. It contains +all the necessary code to connect, send and receive messages to/from an +AMQP-compliant peer or broker (Qpid, OpenAMQ, RabbitMQ) using Twisted. It +also includes support for using Thrift RPC over AMQP in Twisted +applications.") + (license license:asl2.0))) + +(define-public python2-txamqp + (package-with-python2 python-txamqp)) + +(define-public python-kombu + (package + (name "python-kombu") + (version "4.2.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "kombu" version)) + (sha256 + (base32 + "15k8f7mzqr049sg9vi48m19vjykviafk3f0p5xzgw9by0x0kyxjj")))) + (build-system python-build-system) + (native-inputs + `(("python-mock" ,python-mock) + ("python-case" ,python-case) + ("python-pyro4" ,python-pyro4) + ("python-pytest-sugar" ,python-pytest-sugar) + ("python-pytz" ,python-pytz))) + (propagated-inputs + `(("python-anyjson" ,python-anyjson) + ("python-amqp" ,python-amqp) + ("python-redis" ,python-redis))) + (home-page "https://kombu.readthedocs.io") + (synopsis "Message passing library for Python") + (description "The aim of Kombu is to make messaging in Python as easy as +possible by providing an idiomatic high-level interface for the AMQ protocol, +and also provide proven and tested solutions to common messaging problems. +AMQP is the Advanced Message Queuing Protocol, an open standard protocol for +message orientation, queuing, routing, reliability and security, for which the +RabbitMQ messaging server is the most popular implementation.") + (license license:bsd-3) + (properties `((python2-variant . ,(delay python2-kombu)))))) + +(define-public python2-kombu + (let ((kombu (package-with-python2 + (strip-python2-variant python-kombu)))) + (package + (inherit kombu) + (arguments `(;; FIXME: 'TestTransport.test_del_sync' fails on python2. + ;; It works fine on the python3 variant. + #:tests? #f + ,@(package-arguments kombu))) + (native-inputs `(("python2-unittest2" ,python2-unittest2) + ,@(package-native-inputs kombu)))))) + +(define-public python-billiard + (package + (name "python-billiard") + (version "3.5.0.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "billiard" version)) + (sha256 + (base32 + "03msmapj3s5zgqk87d646mafz7a01h5bm2wijalgpi0s80ks5na2")))) + (build-system python-build-system) + (native-inputs + `(("python-case" ,python-case) + ("python-pytest" ,python-pytest))) + (home-page "https://github.com/celery/billiard") + (synopsis + "Python multiprocessing fork with improvements and bugfixes") + (description + "Billiard is a fork of the Python 2.7 multiprocessing package. The +multiprocessing package itself is a renamed and updated version of R Oudkerk's +pyprocessing package. This standalone variant is intended to be compatible with +Python 2.4 and 2.5, and will draw its fixes/improvements from python-trunk.") + (license license:bsd-3) + (properties `((python2-variant . ,(delay python2-billiard)))))) + +(define-public python2-billiard + (let ((billiard (package-with-python2 + (strip-python2-variant python-billiard)))) + (package + (inherit billiard) + (native-inputs `(("python2-unittest2" ,python2-unittest2) + ("python2-mock" ,python2-mock) + ,@(package-native-inputs billiard)))))) + +(define-public python-celery + (package + (name "python-celery") + (version "4.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "celery" version)) + (sha256 + (base32 + "0y66rz7z8dfcgs3s0qxmdddlaq57bzbgxgfz896nbp14grkv9nkp")))) + (build-system python-build-system) + (arguments + '(;; TODO The tests fail with Python 3.7 + ;; https://github.com/celery/celery/issues/4849 + #:tests? #f + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-requirements + (lambda _ + (substitute* "requirements/test.txt" + (("pytest>=3\\.0,<3\\.3") + "pytest>=3.0")) + #t))))) + (native-inputs + `(("python-case" ,python-case) + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-pytz" ,python-pytz) + ("python-billiard" ,python-billiard) + ("python-kombu" ,python-kombu))) + (home-page "https://celeryproject.org") + (synopsis "Distributed Task Queue") + (description "Celery is an asynchronous task queue/job queue based on +distributed message passing. It is focused on real-time operation, but +supports scheduling as well. The execution units, called tasks, are executed +concurrently on a single or more worker servers using multiprocessing, +Eventlet, or gevent. Tasks can execute asynchronously (in the background) or +synchronously (wait until ready).") + (license license:bsd-3) + (properties `((python2-variant . ,(delay python2-celery)))))) + +(define-public python2-celery + (let ((celery (package-with-python2 + (strip-python2-variant python-celery)))) + (package + (inherit celery) + (native-inputs `(("python2-unittest2" ,python2-unittest2) + ("python2-mock" ,python2-mock) + ,@(package-native-inputs celery)))))) + +(define-public python-translitcodec + (package + (name "python-translitcodec") + (version "0.4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "translitcodec" version)) + (sha256 + (base32 + "10x6pvblkzky1zhjs8nmx64nb9jdzxad4bxhq4iwv0j4z2aqjnki")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ; no tests provided + (home-page + "https://github.com/claudep/translitcodec") + (synopsis + "Unicode to 8-bit charset transliteration codec") + (description + "This package contains codecs for transliterating ISO 10646 texts into +best-effort representations using smaller coded character sets (ASCII, +ISO 8859, etc.).") + (license license:expat))) + +(define-public python2-translitcodec + (package-with-python2 python-translitcodec)) + +(define-public python-editor + (package + (name "python-editor") + (version "1.0.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-editor" version)) + (sha256 + (base32 + "0yrjh8w72ivqxi4i7xsg5b1vz15x8fg51xra7c3bgfyxqnyadzai")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ;XXX: needs a TTY and an editor + (home-page "https://github.com/fmoo/python-editor") + (synopsis "Programmatically open an editor, capture the result") + (description + "python-editor is a library that provides the editor module for +programmatically interfacing with your system's $EDITOR.") + (license license:asl2.0))) + +(define-public python2-editor + (package-with-python2 python-editor)) + +(define-public python-vobject + (package + (name "python-vobject") + (version "0.9.6.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "vobject" version)) + (sha256 + (base32 + "0081g4gngw28j7vw8101jk600wz4gzfrhf5myrqvn2mrfkn2llcn")))) + (build-system python-build-system) + (arguments + '(;; The test suite relies on some non-portable Windows interfaces. + #:tests? #f)) + (propagated-inputs + `(("python-dateutil" ,python-dateutil) + ("python-pyicu" ,python-pyicu))) + (synopsis "Parse and generate vCard and vCalendar files") + (description "Vobject is intended to be a full featured Python package for +parsing and generating vCard and vCalendar files. Currently, iCalendar files +are supported and well tested. vCard 3.0 files are supported, and all data +should be imported, but only a few components are understood in a sophisticated +way.") + (home-page "https://eventable.github.io/vobject/") + (license license:asl2.0))) + +(define-public python2-vobject + (package-with-python2 python-vobject)) + +(define-public python-munkres + (package + (name "python-munkres") + (version "1.0.8") + (source (origin + (method url-fetch) + (uri (pypi-uri "munkres" version)) + (sha256 + (base32 + "0mbspx4zv8id4x6pim6ybsa1xh96qwpbqj7skbqz4c9c9nf1lpqq")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; no test suite + (home-page "https://software.clapper.org/munkres/") + (synopsis "Implementation of the Munkres algorithm") + (description "The Munkres module provides an implementation of the Munkres +algorithm (also called the Hungarian algorithm or the Kuhn-Munkres algorithm), +useful for solving the Assignment Problem.") + (license license:bsd-3))) + +(define-public python2-munkres + (package-with-python2 python-munkres)) + +(define-public python-whoosh + (package + (name "python-whoosh") + (version "2.7.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Whoosh" version)) + (sha256 + (base32 + "10qsqdjpbc85fykc1vgcs8xwbgn4l2l52c8d83xf1q59pwyn79bw")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; Test invocation is no longer supported by Python. + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://bitbucket.org/mchaput/whoosh") + (synopsis "Full text indexing, search, and spell checking library") + (description + "Whoosh is a fast, pure-Python full text indexing, search, and spell +checking library.") + (license license:bsd-2))) + +(define-public python2-whoosh + (let ((whoosh (package-with-python2 (strip-python2-variant python-whoosh)))) + (package (inherit whoosh) + (propagated-inputs + `(("python2-backport-ssl-match-hostname" + ,python2-backport-ssl-match-hostname) + ,@(package-propagated-inputs whoosh)))))) + +(define-public python-pathlib + (package + (name "python-pathlib") + (version "1.0.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "pathlib" version)) + (sha256 + (base32 + "17zajiw4mjbkkv6ahp3xf025qglkj0805m9s41c45zryzj6p2h39")))) + (build-system python-build-system) + ;; The tests depend on the internal "test" module, which does not provide + ;; a stable interface. + (arguments `(#:tests? #f)) + (home-page "https://pathlib.readthedocs.org/") + (synopsis "Object-oriented file system paths") + (description "Pathlib offers a set of classes to handle file system paths. +It offers the following advantages over using string objects: + +@enumerate +@item No more cumbersome use of os and os.path functions. Everything can +be done easily through operators, attribute accesses, and method calls. +@item Embodies the semantics of different path types. For example, +comparing Windows paths ignores casing. +@item Well-defined semantics, eliminating any inconsistencies or +ambiguities (forward vs. backward slashes, etc.). +@end enumerate + +Note: In Python 3.4, pathlib is now part of the standard library. For other +Python versions please consider python-pathlib2 instead, which tracks the +standard library module. This module (python-pathlib) isn't maintained +anymore.") + (license license:expat))) + +(define-public python2-pathlib + (package-with-python2 python-pathlib)) + +(define-public python2-pathlib2 + (package + (name "python2-pathlib2") + (version "2.3.5") + (source (origin + (method url-fetch) + (uri (pypi-uri "pathlib2" version)) + (sha256 + (base32 + "0s4qa8c082fdkb17izh4mfgwrjd1n5pya18wvrbwqdvvb5xs9nbc")))) + (build-system python-build-system) + ;; We only need the the Python 2 variant, since for Python 3 our minimum + ;; version is 3.4 which already includes this package as part of the + ;; standard library. + (arguments + `(#:python ,python-2)) + (propagated-inputs + `(("python2-scandir" ,python2-scandir) + ("python2-six" ,python2-six))) + (home-page "https://pypi.org/project/pathlib2/") + (synopsis "Object-oriented file system paths - backport of standard +pathlib module") + (description "The goal of pathlib2 is to provide a backport of standard +pathlib module which tracks the standard library module, so all the newest +features of the standard pathlib can be used also on older Python versions. + +Pathlib offers a set of classes to handle file system paths. It offers the +following advantages over using string objects: + +@enumerate +@item No more cumbersome use of os and os.path functions. Everything can +be done easily through operators, attribute accesses, and method calls. +@item Embodies the semantics of different path types. For example, +comparing Windows paths ignores casing. +@item Well-defined semantics, eliminating any inconsistencies or +ambiguities (forward vs. backward slashes, etc.). +@end enumerate") + (license license:expat))) + +(define-public python2-pathlib2-bootstrap + (hidden-package + (package + (inherit python2-pathlib2) + (name "python2-pathlib2-bootstrap") + (propagated-inputs + `(("python2-scandir" ,python2-scandir) + ("python2-six" ,python2-six-bootstrap)))))) + +(define-public python-jellyfish + (package + (name "python-jellyfish") + (version "0.5.6") + (source (origin + (method url-fetch) + (uri (pypi-uri "jellyfish" version)) + (sha256 + (base32 + "1j9rplb16ba2prjj6mip46z0w9pnhnqpwgiwi0x93vnas14rlyl8")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/jamesturk/jellyfish") + (synopsis "Approximate and phonetic matching of strings") + (description "Jellyfish uses a variety of string comparison and phonetic +encoding algorithms to do fuzzy string matching.") + (license license:bsd-2) + (properties `((python2-variant . ,(delay python2-jellyfish)))))) + +(define-public python2-jellyfish + (let ((jellyfish (package-with-python2 + (strip-python2-variant python-jellyfish)))) + (package (inherit jellyfish) + (native-inputs `(("python2-unicodecsv" ,python2-unicodecsv) + ,@(package-native-inputs jellyfish)))))) + +(define-public python2-unicodecsv + (package + (name "python2-unicodecsv") + (version "0.14.1") + (source (origin + (method git-fetch) + ;; The test suite is not included in the PyPi release. + ;; https://github.com/jdunck/python-unicodecsv/issues/19 + (uri (git-reference + (url "https://github.com/jdunck/python-unicodecsv") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "15hx2k41a2lpv4hcml9zp4cvlx1171mnb5s4s13xc1pxkq3vgdjy")))) + (build-system python-build-system) + (arguments + `(;; It supports Python 3, but Python 3 can already do Unicode CSV. + #:python ,python-2)) + (native-inputs + `(("python2-unittest2" ,python2-unittest2))) + (home-page "https://github.com/jdunck/python-unicodecsv") + (synopsis "Unicode CSV module for Python 2") + (description "Unicodecsv is a drop-in replacement for Python 2.7's CSV +module, adding support for Unicode strings.") + (license license:bsd-2))) + +(define-public python-rarfile + (package + (name "python-rarfile") + (version "2.8") + (source (origin + (method url-fetch) + (uri (pypi-uri "rarfile" version)) + (sha256 + (base32 + "0qfad483kcbga0bn4qmcz953xjk16r52fahiy46zzn56v80y89ra")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + ;; Many tests fail, but the installation proceeds. + (lambda _ (invoke "make" "-C" "test" "test")))))) + (native-inputs + `(("which" ,which))) ; required for tests + (propagated-inputs + `(("libarchive" ,libarchive))) + (home-page "https://github.com/markokr/rarfile") + (synopsis "RAR archive reader for Python") + (description "This is Python module for RAR archive reading. The interface +is made as zipfile like as possible.") + (license license:isc))) + +(define-public python2-rarfile + (package-with-python2 python-rarfile)) + +(define-public python-magic + (package + (name "python-magic") + (version "0.4.15") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-magic" version)) + (sha256 + (base32 + "1mgwig9pnzgkf86q9ji9pnc99bngms15lfszq5rgqb9db07mqxpk")) + (file-name (string-append name "-" version "-checkout")))) + (build-system python-build-system) + (arguments + ;; The tests are unreliable, so don't run them. The tests fail + ;; under Python3 because they were written for Python2 and + ;; contain import statements that do not work in Python3. One of + ;; the tests fails under Python2 because its assertions are + ;; overly stringent; it relies on comparing output strings which + ;; are brittle and can change depending on the version of + ;; libmagic being used and the system on which the test is + ;; running. In my case, under GuixSD 0.10.0, only one test + ;; failed, and it seems to have failed only because the version + ;; of libmagic that is packaged in Guix outputs a slightly + ;; different (but not wrong) string than the one that the test + ;; expected. + '(#:tests? #f + #:phases (modify-phases %standard-phases + ;; Replace a specific method call with a hard-coded + ;; path to the necessary libmagic.so file in the + ;; store. If we don't do this, then the method call + ;; will fail to find the libmagic.so file, which in + ;; turn will cause any application using + ;; python-magic to fail. + (add-before 'build 'hard-code-path-to-libmagic + (lambda* (#:key inputs #:allow-other-keys) + (let ((file (assoc-ref inputs "file"))) + (substitute* "magic.py" + (("ctypes.util.find_library\\('magic'\\)") + (string-append "'" file "/lib/libmagic.so'"))) + #t))) + (add-before 'install 'disable-egg-compression + (lambda _ + (let ((port (open-file "setup.cfg" "a"))) + (display "\n[easy_install]\nzip_ok = 0\n" + port) + (close-port port) + #t)))))) + (inputs + ;; python-magic needs to be able to find libmagic.so. + `(("file" ,file))) + (home-page + "https://github.com/ahupp/python-magic") + (synopsis + "File type identification using libmagic") + (description + "This module uses ctypes to access the libmagic file type +identification library. It makes use of the local magic database and +supports both textual and MIME-type output. Note that this module and +the python-file module both provide a \"magic.py\" file; these two +modules, which are different and were developed separately, both serve +the same purpose: to provide Python bindings for libmagic.") + (license license:expat))) + +(define-public python2-magic + (package-with-python2 python-magic)) + +(define-public python2-s3cmd + (package + (name "python2-s3cmd") + (version "1.6.1") + (source + (origin + (method url-fetch) + (uri (string-append "mirror://sourceforge/s3tools/s3cmd/" version "/" + "s3cmd-" version ".tar.gz")) + (sha256 + (base32 + "0ki1rzhm5icvi9ry5jswi4b22yqwyj0d2wsqsgilwx6qhi7pjxa6")))) + (build-system python-build-system) + (arguments + ;; s3cmd is written for python2 only and contains no tests. + `(#:python ,python-2 + #:tests? #f)) + (propagated-inputs + `(("python2-dateutil" ,python2-dateutil) + ;; The python-file package also provides a magic.py module. + ;; This is an unfortunate state of affairs; however, s3cmd + ;; fails to install if it cannot find specifically the + ;; python-magic package. Thus we include it, instead of using + ;; python-file. Ironically, s3cmd sometimes works better + ;; without libmagic bindings at all: + ;; https://github.com/s3tools/s3cmd/issues/198 + ("python2-magic" ,python2-magic))) + (home-page "https://s3tools.org/s3cmd") + (synopsis "Command line tool for S3-compatible storage services") + (description + "S3cmd is a command line tool for uploading, retrieving and managing data +in storage services that are compatible with the Amazon Simple Storage +Service (S3) protocol, including S3 itself. It supports rsync-like backup, +GnuPG encryption, and more. It also supports management of Amazon's +CloudFront content delivery network.") + (license license:gpl2+))) + +(define-public python-pkgconfig + (package + (name "python-pkgconfig") + (version "1.3.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pkgconfig" version)) + (sha256 + (base32 + "107x2wmchlch8saixb488cgjz9n6inl38wi7nxkb942rbaapxiqb")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose))) + (inputs + `(("pkg-config" ,pkg-config))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'build 'patch + ;; Hard-code the path to pkg-config. + (lambda _ + (substitute* "pkgconfig/pkgconfig.py" + (("cmd = 'pkg-config") + (string-append "cmd = '" (which "pkg-config")))) + #t)) + (replace 'check + (lambda _ + (invoke "nosetests" "test.py")))))) + (home-page "https://github.com/matze/pkgconfig") + (synopsis "Python interface for pkg-config") + (description "This module provides a Python interface to pkg-config. It +can be used to find all pkg-config packages, check if a package exists, +check if a package meets certain version requirements, query CFLAGS and +LDFLAGS and parse the output to build extensions with setup.py.") + (license license:expat))) + +(define-public python2-pkgconfig + (package-with-python2 python-pkgconfig)) + +(define-public python-bz2file + (package + (name "python-bz2file") + (version "0.98") + (source + (origin + (method url-fetch) + (uri (pypi-uri "bz2file" version)) + (sha256 + (base32 + "126s53fkpx04f33a829yqqk8fj4png3qwg4m66cvlmhmwc8zihb4")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ; Tests use deprecated python modules. + (home-page "https://github.com/nvawda/bz2file") + (synopsis "Read and write bzip2-compressed files") + (description + "Bz2file is a Python library for reading and writing bzip2-compressed +files. It contains a drop-in replacement for the I/O interface in the +standard library's @code{bz2} module, including features from the latest +development version of CPython that are not available in older releases.") + (license license:asl2.0))) + +(define-public python2-bz2file + (package-with-python2 python-bz2file)) + +(define-public python-future + (package + (name "python-future") + (version "0.17.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "future" version)) + (sha256 + (base32 + "1f2rlqn9rh7adgir52dlbqz69gsab44x0mlm8gf1cs7xvhv54137")))) + (build-system python-build-system) + ;; Many tests connect to the network or are otherwise flawed. + ;; https://github.com/PythonCharmers/python-future/issues/210 + (arguments + `(#:tests? #f)) + (home-page "https://python-future.org") + (synopsis "Single-source support for Python 3 and 2") + (description + "@code{python-future} is the missing compatibility layer between Python 2 and +Python 3. It allows you to use a single, clean Python 3.x-compatible codebase +to support both Python 2 and Python 3 with minimal overhead.") + (license license:expat))) + +(define-public python2-future + (package-with-python2 python-future)) + +(define-public python-cysignals + (package + (name "python-cysignals") + (version "1.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cysignals" version)) + (sha256 + (base32 + "15ix8crpad26cfl1skyg7qajqqfdrm8q5ahhmlfmqi1aw0jqj2g2")))) + (build-system python-build-system) + (native-inputs + `(("python-cython" ,python-cython) + ("python-sphinx" ,python-sphinx))) + (inputs + `(("pari-gp" ,pari-gp))) + (arguments + `(#:modules ((guix build python-build-system) + ((guix build gnu-build-system) #:prefix gnu:) + (guix build utils)) + ;; FIXME: Tests are executed after installation and currently fail + ;; when not installing into standard locations; the author is working + ;; on a fix. + #:tests? #f + #:phases + (modify-phases %standard-phases + (add-before + 'build 'configure + (assoc-ref gnu:%standard-phases 'configure))))) + (home-page + "https://github.com/sagemath/cysignals") + (synopsis + "Handling of interrupts and signals for Cython") + (description + "The cysignals package provides mechanisms to handle interrupts (and +other signals and errors) in Cython code, using two related approaches, +for mixed Cython/Python code or external C libraries and pure Cython code, +respectively.") + (license license:lgpl3+))) + +(define-public python2-cysignals + (package-with-python2 python-cysignals)) + +(define-public python2-shedskin + (package + (name "python2-shedskin") + (version "0.9.4") + (source + (origin + (method url-fetch) + (uri (string-append "https://github.com/shedskin/shedskin/" + "releases/download/v" version + "/shedskin-" version ".tgz")) + (sha256 + (base32 + "0nzwrzgw1ga8rw6f0ryq7zr9kkiavd1cqz5hzxkcbicl1dk7kz41")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + #:phases (modify-phases %standard-phases + (add-after 'unpack 'fix-resulting-include-libs + (lambda* (#:key inputs #:allow-other-keys) + (let ((libgc (assoc-ref inputs "libgc")) + (pcre (assoc-ref inputs "pcre"))) + (substitute* "shedskin/makefile.py" + (("variable == 'CCFLAGS':[ ]*") + (string-append "variable == 'CCFLAGS':\n" + " line += ' -I " pcre "/include" + " -I " libgc "/include'")) + (("variable == 'LFLAGS':[ ]*") + (string-append "variable == 'LFLAGS':\n" + " line += ' -L" pcre "/lib" + " -L " libgc "/lib'"))) + #t)))))) + (inputs `(("pcre" ,pcre) + ("libgc" ,libgc))) + (home-page "https://shedskin.github.io/") + (synopsis "Experimental Python-2 to C++ Compiler") + (description (string-append "This is an experimental compiler for a subset of +Python. It generates C++ code and a Makefile.")) + (license (list license:gpl3 license:bsd-3 license:expat)))) + +(define-public python2-rope + (package + (name "python2-rope") + (version "0.11.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rope" version)) + (sha256 + (base32 + "1cppm0pa9aqgsbkq130lskrzmrvjs5vpiavjjbhpz2fdw52w8251")))) + (arguments + ;; Rope has only partial python3 support, see `python-rope' + `(#:python ,python-2)) + (build-system python-build-system) + (native-inputs + `(("python2-unittest2" ,python2-unittest2))) + (home-page "https://github.com/python-rope/rope") + (synopsis "Refactoring library for Python") + (description "Rope is a refactoring library for Python. It facilitates +the renaming, moving and extracting of attributes, functions, modules, fields +and parameters in Python 2 source code. These refactorings can also be applied +to occurrences in strings and comments.") + (license license:gpl2))) + +(define-public python-rope + (package + (inherit python2-rope) + (name "python-rope") + (arguments `(#:python ,python-wrapper + ;; XXX: Only partial python3 support, results in some failing + ;; tests: . + #:tests? #f)) + (properties `((python2-variant . ,(delay python2-rope)))))) + +(define-public python-py3status + (package + (name "python-py3status") + (version "3.21") + (source + (origin + (method url-fetch) + (uri (pypi-uri "py3status" version)) + (sha256 + (base32 "16z8zq83hxy48g6hh4xczbdz50qvxv9k1aahr4fqq7jis60cc262")))) + (build-system python-build-system) + (inputs + `(("file" ,file))) + (arguments + '(#:phases + (modify-phases %standard-phases + ;; 'file' is used for detection of configuration file encoding + ;; let's make link the dependency to particular input + (add-before 'build 'patch-file-path + (lambda* (#:key inputs #:allow-other-keys) + (let ((file-path (assoc-ref inputs "file"))) + (substitute* "py3status/parse_config.py" + (("\\[\"file\", \"-b\"") + (string-append "['" file-path "/bin/file', '-b'"))) + #t)))) + #:tests? #f)) ; TODO: Requires many libraries not in Guix. + (home-page "https://github.com/ultrabug/py3status") + (synopsis "Extensible i3status wrapper written in Python") + (description "py3status is an i3status wrapper which extends i3status +functionality in a modular way, allowing you to extend your panel with your +own code, responding to click events and updating clock every second.") + (license license:bsd-3))) + +(define-public python2-selectors2 + (package + (name "python2-selectors2") + (version "2.0.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "selectors2" version)) + (sha256 + (base32 + "110qr00b9axz1f1jm12b495jkvrz80smknxvssqlhwk0dx67rdw1")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (native-inputs + `(("python2-mock" ,python2-mock) + ("python2-psutil" ,python2-psutil))) + (home-page "https://www.github.com/SethMichaelLarson/selectors2") + (synopsis "Backport of the selectors module from Python 3.5+") + (description + "This package provides a drop-in replacement for the @code{selectors} +module in Python 3.5 and later.") + (license license:expat))) + +(define-public python-tblib + (package + (name "python-tblib") + (version "1.6.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "tblib" version)) + (sha256 + (base32 + "0i136n5pydmd202254wzrdbspkw0br0c9mbxhfs9hpfbahvyx6r2")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; Upstream runs tests after installation and the package itself + ;; resides in a subdirectory. Extend PYTHONPATH so it will be + ;; found. + (setenv "PYTHONPATH" + (string-append (getcwd) "/build/lib:" + (getenv "PYTHONPATH"))) + (invoke "py.test" "-vv" "tests" "README.rst")))))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-six" ,python-six))) + (home-page "https://github.com/ionelmc/python-tblib") + (synopsis "Traceback serialization library") + (description + "Traceback serialization allows you to: + +@enumerate +@item Pickle tracebacks and raise exceptions with pickled tracebacks in +different processes. This allows better error handling when running code over +multiple processes (imagine multiprocessing, billiard, futures, celery etc). + +@item Parse traceback strings and raise with the parsed tracebacks. +@end enumerate\n") + (license license:bsd-3))) + +(define-public python2-tblib + (package-with-python2 python-tblib)) + +(define-public python-greenlet + (package + (name "python-greenlet") + (version "0.4.16") + (source (origin + (method url-fetch) + (uri (pypi-uri "greenlet" version)) + (sha256 + (base32 + "0v2571d0av1hz3yx63gvmnrinyn57nnvibg4zkl9frv74b3yl1kf")))) + (build-system python-build-system) + (home-page "https://greenlet.readthedocs.io/") + (synopsis "Lightweight in-process concurrent programming") + (description + "Greenlet package is a spin-off of Stackless, a version of CPython +that supports micro-threads called \"tasklets\". Tasklets run +pseudo-concurrently (typically in a single or a few OS-level threads) and +are synchronized with data exchanges on \"channels\".") + (license (list license:psfl license:expat)))) + +(define-public python2-greenlet + (package-with-python2 python-greenlet)) + +(define-public python-objgraph + (package + (name "python-objgraph") + (version "3.4.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "objgraph" version)) + (sha256 + (base32 + "19qmqsh984zq1rzzjy4vqnmviaqnymcyl8h7z99pnicbgwnm2adz")))) + (build-system python-build-system) + (propagated-inputs + `(("python-graphviz" ,python-graphviz))) + (native-inputs + `(("python-mock" ,python-mock) + ("graphviz" ,graphviz))) + (home-page "https://mg.pov.lt/objgraph/") + (synopsis "Draw Python object reference graphs with graphviz") + (description + "This package provides tools to draw Python object reference graphs with +graphviz.") + (license license:expat))) + +(define-public python2-objgraph + (package-with-python2 python-objgraph)) + +(define-public python-gevent + (package + (name "python-gevent") + (version "20.6.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "gevent" version)) + (sha256 + (base32 + "1ldmppgghfphdaazjw6wq2i17xcmsjb2jsizfa4cjlg812zjlg52")) + (modules '((guix build utils))) + (snippet + '(begin + ;; unbunding libev and c-ares + (delete-file-recursively "deps") + #t)))) + (build-system python-build-system) + (arguments + `(#:modules ((ice-9 ftw) + (ice-9 match) + (srfi srfi-26) + (guix build utils) + (guix build python-build-system)) + #:phases (modify-phases %standard-phases + (add-before 'patch-source-shebangs 'patch-hard-coded-paths + (lambda _ + (substitute* "src/gevent/subprocess.py" + (("/bin/sh") (which "sh"))) + (for-each (lambda (file) + (substitute* file + (("/bin/sh") (which "sh")) + (("/bin/true") (which "true")))) + (find-files "src/greentest" "\\.py$")) + #t)) + (add-before 'build 'do-not-use-bundled-sources + (lambda _ + (setenv "GEVENTSETUP_EMBED" "0") + + ;; Prevent building bundled libev. + (substitute* "setup.py" + (("run_make=_BUILDING") + "run_make=False")) + #t)) + (add-before 'build 'add-greenlet-on-C_INCLUDE_PATH + (lambda* (#:key inputs #:allow-other-keys) + (let ((greenlet (string-append + (assoc-ref inputs "python-greenlet") + "/include"))) + (match (scandir greenlet + (lambda (item) + (string-prefix? "python" item))) + ((python) + (setenv "C_INCLUDE_PATH" + (string-append greenlet "/" python ":" + (or (getenv "C_INCLUDE_PATH") + "")))))) + #t)) + (add-before 'check 'pretend-to-be-CI + (lambda _ + ;; A few tests are skipped due to network constraints or + ;; get longer timeouts when running in a CI environment. + ;; Piggy-back on that, as we need the same adjustments. + (setenv "TRAVIS" "1") + (setenv "APPVEYOR" "1") + #t)) + (add-before 'check 'adjust-tests + (lambda _ + (let ((disabled-tests + '(;; These tests rely on networking which is not + ;; available in the build container. + "test_urllib2net.py" + "test__server.py" + "test__server_pywsgi.py" + "test_socket.py" + "test__socket.py" + "test__socket_ssl.py" + "test__socket_dns.py" + "test__socket_dns6.py" + "test___example_servers.py" + "test__getaddrinfo_import.py" + "test__examples.py" + "test_httplib.py" + "test_https.py" + "test_urllib2_localnet.py" + "test_ssl.py" + "test__ssl.py" + ;; XXX: These tests borrow functionality from the + ;; Python builtin 'test' module, but it is not + ;; installed with the Guix Python distribution. + "test_smtpd.py" + "test_wsgiref.py" + "test_urllib2.py" + "test_thread.py" + "test_threading.py" + "test__threading_2.py" + ;; These tests rely on KeyboardInterrupts which do not + ;; work inside the build container for some reason + ;; (lack of controlling terminal?). + "test_subprocess.py" + "test__issues461_471.py" + ;; TODO: Patch out the tests that use getprotobyname, etc + ;; instead of disabling all the tests from these files. + "test__resolver_dnspython.py" + "test__doctests.py" + "test__all__.py" + "test___config.py" + "test__execmodules.py"))) + (call-with-output-file "skipped_tests.txt" + (lambda (port) + (format port "~a~%" + (string-join disabled-tests "\n")))) + #t))) + (replace 'check + (lambda _ + ;; Make sure the build directory is on PYTHONPATH. + (setenv "PYTHONPATH" + (string-append + (getenv "PYTHONPATH") ":" + (getcwd) "/build/" + (car (scandir "build" (cut string-prefix? "lib." <>))))) + + ;; Use the build daemons configured number of workers. + (setenv "NWORKERS" (number->string (parallel-job-count))) + + (invoke "python" "-m" "gevent.tests" "--config" + "known_failures.py" "--ignore" "skipped_tests.txt")))))) + (propagated-inputs + `(("python-greenlet" ,python-greenlet) + ("python-objgraph" ,python-objgraph) + ("python-zope.event" ,python-zope-event) + ("python-zope.interface" ,python-zope-interface))) + (native-inputs + `(("python-six" ,python-six) + + ;; For tests. + ("python-dnspython" ,python-dnspython) + ("python-psutil" ,python-psutil))) + (inputs + `(("c-ares" ,c-ares) + ("libev" ,libev))) + (home-page "http://www.gevent.org/") + (synopsis "Coroutine-based network library") + (description + "gevent is a coroutine-based Python networking library that uses greenlet +to provide a high-level synchronous API on top of the libev event loop.") + (license license:expat) + (properties `((python2-variant . ,(delay python2-gevent)))))) + +(define-public python2-gevent + (let ((base (package-with-python2 + (strip-python2-variant python-gevent)))) + (package + (inherit base) + (native-inputs `(,@(package-native-inputs base) + ("python-mock" ,python2-mock) + ("python2-selectors2" ,python2-selectors2)))))) + +(define-public python-fastimport + (package + (name "python-fastimport") + (version "0.9.8") + (source + (origin + (method url-fetch) + (uri (pypi-uri "fastimport" version)) + (sha256 + (base32 "1fb3b7y3sw55f6wykxx478ybkirz0l52lgdqmbhmc0h0jzmyiwmj")))) + (build-system python-build-system) + (home-page "https://github.com/jelmer/python-fastimport") + (synopsis "VCS fastimport parser and generator in Python") + (description "This package provides a parser for and generator of the Git +@url{https://www.kernel.org/pub/software/scm/git/docs/git-fast-import.html,fastimport} +format.") + (license license:gpl2+))) + +(define-public python2-fastimport + (package-with-python2 python-fastimport)) + +(define-public python-twisted + (package + (name "python-twisted") + (version "19.7.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "Twisted" version ".tar.bz2")) + (sha256 + (base32 + "17d3hnxv9qndagzz63mdpyk99xj63p9gq586vjn0rxk8cl197nym")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; FIXME: some tests fail + (propagated-inputs + `(("python-zope-interface" ,python-zope-interface) + ("python-pyhamcrest" ,python-pyhamcrest) + ("python-incremental" ,python-incremental) + ("python-hyperlink" ,python-hyperlink) + ("python-constantly" ,python-constantly) + ("python-automat" ,python-automat))) + (home-page "https://twistedmatrix.com/") + (synopsis "Asynchronous networking framework written in Python") + (description + "Twisted is an extensible framework for Python programming, with special +focus on event-based network programming and multiprotocol integration.") + (license license:expat))) + +(define-public python2-twisted + (package-with-python2 python-twisted)) + +(define-public python-pika + (package + (name "python-pika") + (version "0.12.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pika" version)) + (sha256 + (base32 + "0ld7akgm93s8pfa4dsx9qlzlhj76zspbr5m9ms0ns09yd2w4aq9h")))) + (build-system python-build-system) + (native-inputs + `(("python-pyev" ,python-pyev) + ("python-tornado" ,python-tornado) + ("python-twisted" ,python-twisted))) + (home-page "https://pika.readthedocs.org") + (synopsis "Pure Python AMQP Client Library") + (description + "Pika is a pure-Python implementation of the AMQP (Advanced Message Queuing +Protocol) 0-9-1 protocol that tries to stay fairly independent of the underlying +network support library.") + (license license:bsd-3))) + +(define-public python2-pika + (package-with-python2 python-pika)) + +(define-public python-ply + (package + (name "python-ply") + (version "3.11") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ply" version)) + (sha256 + (base32 + "18qx113g9bi1ac4indd5phma82zcdq601lxncp3vjn43m2mc3iq0")))) + (build-system python-build-system) + (home-page "http://www.dabeaz.com/ply/") + (synopsis "Python Lex & Yacc") + (description "PLY is a @code{lex}/@code{yacc} implemented purely in Python. +It uses LR parsing and does extensive error checking.") + (license license:bsd-3))) + +(define-public python-tabulate + (package + (name "python-tabulate") + (version "0.8.7") + (source (origin + (method url-fetch) + (uri (pypi-uri "tabulate" version)) + (sha256 + (base32 + "01shi7bmj09f0bcm5s0c9skys063lzp76p0n4a2xmg041ni269yv")))) + (build-system python-build-system) + (arguments + ;; FIXME: The pypi release tarball is missing a 'test/common.py' + ;; and the latest release is not tagged in the upstream repository. + '(#:tests? #f)) + (home-page "https://bitbucket.org/astanin/python-tabulate") + (synopsis "Pretty-print tabular data") + (description + "Tabulate is a library and command-line utility to pretty-print tabular +data in Python.") + (license license:expat))) + +(define-public python2-tabulate + (package-with-python2 python-tabulate)) + +(define-public python-kazoo + (package + (name "python-kazoo") + (version "2.4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "kazoo" version)) + (sha256 + (base32 + "16y213k7r8shyn2zw1k6lkzjgcrvm441pqv8scvcjixhvpbx3hm7")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; XXX: needs zookeeper + (propagated-inputs + `(("python-six" ,python-six))) + (home-page "https://kazoo.readthedocs.org") + (synopsis "High-level Zookeeper client library") + (description + "Kazoo is a Python client library for the Apache Zookeeper distributed +application service. It is designed to be easy to use and to avoid common +programming errors.") + (license license:asl2.0))) + +(define-public python2-kazoo + (package-with-python2 python-kazoo)) + +(define-public python-pykafka + (package + (name "python-pykafka") + (version "2.4.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "pykafka" version)) + (sha256 + (base32 + "1id6sr159p6aa13bxcqyr9gln8sqg1l0ddzns5iws8kk5q1p5cfv")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; XXX: needs zookeeper, kafka, etc. + (propagated-inputs + `(("python-gevent" ,python-gevent) + ("python-kazoo" ,python-kazoo) + ("python-tabulate" ,python-tabulate))) + (inputs + `(("librdkafka" ,librdkafka))) + (home-page "https://pykafka.readthedocs.io/") + (synopsis "Apache Kafka client for Python") + (description + "PyKafka is a client for the Apache Kafka distributed messaging system. +It includes Python implementations of Kafka producers and consumers, which +are optionally backed by a C extension built on librdkafka.") + (license license:asl2.0))) + +(define-public python2-pykafka + (package-with-python2 python-pykafka)) + +(define-public python-wcwidth + (package + (name "python-wcwidth") + (version "0.1.8") + (source (origin + (method url-fetch) + (uri (pypi-uri "wcwidth" version)) + (sha256 + (base32 + "1a1pzds3xzfylm5mnc5f6c1p8kiig0daqjc9gygd9rc3cj53x2zj")))) + (build-system python-build-system) + (home-page "https://github.com/jquast/wcwidth") + (synopsis "Measure number of terminal column cells of wide-character codes") + (description "Wcwidth measures the number of terminal column cells of +wide-character codes. It is useful for those implementing a terminal emulator, +or programs that carefully produce output to be interpreted by one. It is a +Python implementation of the @code{wcwidth} and @code{wcswidth} C functions +specified in POSIX.1-2001 and POSIX.1-2008.") + (license license:expat))) + +(define-public python2-wcwidth + (package-with-python2 python-wcwidth)) + +(define-public python2-jsonrpclib + (package + (name "python2-jsonrpclib") + (version "0.1.7") + (source (origin + (method url-fetch) + (uri (pypi-uri "jsonrpclib" version)) + (sha256 + (base32 + "02vgirw2bcgvpcxhv5hf3yvvb4h5wzd1lpjx8na5psdmaffj6l3z")))) + (build-system python-build-system) + (arguments + `(#:tests? #f + #:python ,python-2)) + (home-page "https://github.com/joshmarshall/jsonrpclib/") + (synopsis "Implementation of JSON-RPC specification for Python") + (description + "This library is an implementation of the JSON-RPC specification. +It supports both the original 1.0 specification, as well as the +new (proposed) 2.0 spec, which includes batch submission, keyword arguments, +etc.") + (license license:asl2.0))) + +(define-public python-chai + (package + (name "python-chai") + (version "1.1.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "chai" version)) + (sha256 + (base32 + "1k6n6zbgrrs83crp6mr3yqj9zlv40b8rpisyrliwsq7naml2p3gz")))) + (build-system python-build-system) + (home-page "https://github.com/agoragames/chai") + (synopsis "Mocking framework for Python") + (description + "Chai provides an api for mocking, stubbing and spying your python +objects, patterned after the Mocha library for Ruby.") + (license license:bsd-3))) + +(define-public python2-chai + (package-with-python2 python-chai)) + +(define-public python-inflection + (package + (name "python-inflection") + (version "0.3.1") + (source + (origin (method url-fetch) + (uri (pypi-uri "inflection" version)) + (sha256 + (base32 + "1jhnxgnw8y3mbzjssixh6qkc7a3afc4fygajhqrqalnilyvpzshq")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/jpvanhal/inflection") + (synopsis "Python string transformation library") + (description + "Inflection is a string transformation library. It singularizes +and pluralizes English words, and transforms strings from CamelCase to +underscored string.") + (license license:expat))) + +(define-public python2-inflection + (package-with-python2 python-inflection)) + +(define-public python-pylev + (package + (name "python-pylev") + (version "1.3.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "pylev" version)) + (sha256 + (base32 + "1hz1x9blsbxya1y9nnhnwwdnqmakxi9mc0jkwj0rn6b1h44i0f86")))) + (build-system python-build-system) + (home-page "https://github.com/toastdriven/pylev") + (synopsis "Levenshtein distance implementation in Python") + (description "Pure Python Levenshtein implementation, based off the +Wikipedia code samples at +@url{http://en.wikipedia.org/wiki/Levenshtein_distance}.") + (license license:bsd-3))) + +(define-public python2-pylev + (package-with-python2 python-pylev)) + +(define-public python-cleo + (package + (name "python-cleo") + (version "0.7.6") + (source (origin + (method url-fetch) + (uri (pypi-uri "cleo" version)) + (sha256 + (base32 + "02dlc0rn43zgvw0s5v4j80bca9n1jfpwy3r78gn9qjgk0qj39kwr")))) + (build-system python-build-system) + (native-inputs + `( ;; For testing + ("python-mock" ,python-mock) + ("python-pytest-mock" ,python-pytest-mock) + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-backpack" ,python-backpack) + ("python-clikit" ,python-clikit) + ("python-pastel" ,python-pastel) + ("python-pylev" ,python-pylev))) + (home-page "https://github.com/sdispater/cleo") + (synopsis "Command-line arguments library for Python") + (description + "Cleo allows you to create command-line commands with signature in +docstring and colored output.") + (license license:expat))) + +(define-public python2-cleo + (package-with-python2 python-cleo)) + +(define-public python-tomlkit + (package + (name "python-tomlkit") + (version "0.6.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "tomlkit" version)) + (sha256 + (base32 "16jf0060csn8p500jnxa7m5h1sl3pzispvd11961dzrhh287dybl")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/sdispater/tomlkit") + (synopsis "Style-preserving TOML library") + (description + "TOML Kit is a 0.5.0-compliant TOML library. It includes a parser that +preserves all comments, indentations, whitespace and internal element ordering, +and makes them accessible and editable via an intuitive API. It can also +create new TOML documents from scratch using the provided helpers. Part of the +implementation has been adapted, improved, and fixed from Molten.") + (license license:expat))) + +(define-public python-shellingham + (package + (name "python-shellingham") + (version "1.3.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "shellingham" version)) + (sha256 + (base32 "07kmia2hvd2q7wik89m82hig9mqr2faynvy38vxq5fm0ps11jv2p")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'restore-setup.py + ;; setup.py will return in the next release. + ;; + (lambda _ + (with-output-to-file "setup.py" + (lambda _ + (display "from setuptools import setup\nsetup()\n"))) + #t))))) + (home-page "https://github.com/sarugaku/shellingham") + (synopsis "Tool to detect surrounding shell") + (description + "Shellingham detects what shell the current Python executable is +running in.") + (license license:isc))) + +(define-public python-memcached + (package + (name "python-memcached") + (version "1.59") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-memcached" version)) + (sha256 + (base32 + "0kvyapavbirk2x3n1jx4yb9nyigrj1s3x15nm3qhpvhkpqvqdqm2")) + (patches (search-patches "python-memcached-syntax-warnings.patch")))) + (build-system python-build-system) + (propagated-inputs `(("python-six" ,python-six))) + (home-page + "https://github.com/linsomniac/python-memcached") + (synopsis "Pure python memcached client") + (description + "This software is a pure Python interface to the memcached memory cache +daemon. It is the client side software which allows storing values in one or +more, possibly remote, memcached servers.") + (license license:psfl))) + +(define-public python-clikit + (package + (name "python-clikit") + (version "0.6.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "clikit" version)) + (sha256 + (base32 + "0ngdkmb73gkp5y00q7r9k1cdlfn0wyzws2wrqlshc4hlkbdyabj4")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; no test in the PyPI tarball + (propagated-inputs + `(("python-crashtest" ,python-crashtest) + ("python-pastel" ,python-pastel) + ("python-pylev" ,python-pylev))) + (home-page "https://github.com/sdispater/clikit") + (synopsis "Group of utilities to build command line interfaces") + (description + "CliKit is a group of utilities to build testable command line +interfaces.") + (properties `((python2-variant . ,(delay python2-clikit)))) + (license license:expat))) + +(define-public python2-clikit + (let ((base (package-with-python2 (strip-python2-variant python-clikit)))) + (package/inherit + base + (propagated-inputs + `(("python-enum34" ,python2-enum34) + ("python-typing" ,python2-typing) + ,@(package-propagated-inputs base)))))) + +(define-public python-msgpack-python + (package + (name "python-msgpack-python") + (version "0.5.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "msgpack-python" version)) + (sha256 + (base32 + "16wh8qgybmfh4pjp8vfv78mdlkxfmcasg78lzlnm6nslsfkci31p")))) + (build-system python-build-system) + (home-page "http://msgpack.org/") + (synopsis "Package to deserialize messages in MessagePack binary format") + (description + "MessagePack is an efficient binary serialization format. It lets you +exchange data among multiple languages like JSON. But it's faster and +smaller. Small integers are encoded into a single byte, and typical short +strings require only one extra byte in addition to the strings themselves.") + (license license:asl2.0))) + +(define-public python-cachy + (package + (name "python-cachy") + (version "0.3.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cachy" version)) + (sha256 + (base32 + "1cb9naly8ampzlky7h74n5wj628l7jkpsh0c0jz0namlrvs82r8q")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (invoke "pifpaf" "run" "memcached" "--port" "11211" "--" + "pytest")))))) + (native-inputs + `(("memcached" ,memcached) + ("python-fakeredis" ,python-fakeredis) + ("python-flexmock" ,python-flexmock) + ("python-pifpaf" ,python-pifpaf) + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-memcached" ,python-memcached) + ("python-msgpack-python" ,python-msgpack-python) + ("python-redis" ,python-redis))) + (home-page "https://github.com/sdispater/cachy") + (synopsis "Simple yet effective caching library") + (description + "Cachy provides a simple yet effective caching library. A simple but +powerful API: thread-safety; decorator syntax; support for memcached, redis, +database, file, dict stores. Cachy supports python versions 2.7+ and 3.2+.") + (license license:expat))) + +(define-public poetry + (package + (name "poetry") + (version "1.0.10") + ;; Poetry can only be built from source with Poetry. + (source + (origin + (method url-fetch) + (uri (pypi-uri "poetry" version)) + (sha256 + (base32 + "1wm66xlsls4f0q4skmq96yb7aahjsqwgwvbrw4iax6rd4xfqj6sb")))) + (build-system python-build-system) + (arguments + `(#:tests? #f ;; Pypi does not have tests. + #:phases + (modify-phases %standard-phases + (add-before 'build 'patch-setup-py + (lambda _ + (substitute* "setup.py" + ;; poetry won't update version as 21.0.0 relies on python > 3.6 + (("keyring>=20.0.1,<21.0.0") "keyring>=21.0.0,<22.0.0") + (("pyrsistent>=0.14.2,<0.15.0") "pyrsistent>=0.14.2,<0.17.0")) + #t))))) + (propagated-inputs + `(("python-cachecontrol" ,python-cachecontrol) + ("python-cachy" ,python-cachy) + ("python-cleo" ,python-cleo) + ("python-clikit" ,python-clikit) + ("python-html5lib" ,python-html5lib) + ("python-jsonschema" ,python-jsonschema) + ("python-keyring" ,python-keyring) + ("python-msgpack-transitional" ,python-msgpack-transitional) + ("python-pexpect" ,python-pexpect) + ("python-pkginfo" ,python-pkginfo) + ("python-pyparsing" ,python-pyparsing) + ("python-pyrsistent" ,python-pyrsistent) + ("python-requests" ,python-requests) + ("python-requests-toolbelt" ,python-requests-toolbelt) + ("python-shellingham" ,python-shellingham) + ("python-tomlkit" ,python-tomlkit) + ("python-virtualenv" ,python-virtualenv))) + (home-page "https://python-poetry.org") + (synopsis "Python dependency management and packaging made easy") + (description "Poetry is a tool for dependency management and packaging +in Python. It allows you to declare the libraries your project depends on and +it will manage (install/update) them for you.") + (license license:expat))) + +(define-public python-lark-parser + (package + (name "python-lark-parser") + (version "0.9.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "lark-parser" version)) + (sha256 + (base32 + "1kd61asrb3h9spgsj4bslfbgp8q4271sw3hblk6f2vbbblv8jxcy")))) + (build-system python-build-system) + (home-page "https://github.com/lark-parser/lark") + (synopsis "Multi-language parser for Python") + (description + "Lark is a parser built with a focus on ergonomics, performance and +resilience. Lark can parse all context-free languages. That means it is +capable of parsing almost any programming language out there, and to +some degree most natural languages too.") + (license license:expat))) + +(define-public python-libcst + (package + (name "python-libcst") + (version "0.3.8") + (source (origin + (method url-fetch) + (uri (pypi-uri "libcst" version)) + (sha256 + (base32 + "05zsc61gsd2pyb6wiyh58zczndxi6rm4d2jl94rpf5cv1fzw6ks8")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'remove-failing-tests + (lambda _ + ;; Reported upstream: . + (delete-file "libcst/tests/test_fuzz.py") + ;; Reported upstream: . + (delete-file "libcst/tests/test_pyre_integration.py") + (delete-file "libcst/codemod/tests/test_codemod_cli.py") + (delete-file "libcst/metadata/tests/test_full_repo_manager.py") + (delete-file "libcst/metadata/tests/test_type_inference_provider.py") + #t)) + (add-before 'check 'generate-test-data + (lambda _ + (setenv "PYTHONPATH" (string-append (getcwd) ":" (getenv "PYTHONPATH"))) + (invoke "python" "-m" "libcst.codegen.generate" "visitors") + (invoke "python" "-m" "libcst.codegen.generate" "return_types"))) + (replace 'check + (lambda _ + (invoke "python" "-m" "unittest") + #t))))) + (native-inputs + `(("python-black" ,python-black) + ("python-isort" ,python-isort))) + (propagated-inputs + `(("python-typing-extensions" ,python-typing-extensions) + ("python-typing-inspect" ,python-typing-inspect) + ("python-pyyaml" ,python-pyyaml))) + (home-page "https://github.com/Instagram/LibCST") + (synopsis "Concrete Syntax Tree (CST) parser and serializer library for Python") + (description + "LibCST parses Python source code as a CST tree that keeps all +formatting details (comments, whitespaces, parentheses, etc). It's useful +for building automated refactoring (codemod) applications and linters. +LibCST creates a compromise between an Abstract Syntax Tree (AST) and +a traditional Concrete Syntax Tree (CST). By carefully reorganizing and +naming node types and fields, LibCST creates a lossless CST that looks and +feels like an AST.") + (license (list license:expat + ;; Some files unde libcst/_parser/ are under Python Software + ;; Foundation license (see LICENSE file for details) + license:psfl + ;; libcst/_add_slots.py + license:asl2.0)))) + +(define-public python-typing-inspect + (package + (name "python-typing-inspect") + (version "0.6.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "typing_inspect" version)) + (sha256 + (base32 + "1dzs9a1pr23dhbvmnvms2jv7l7jk26023g5ysf0zvnq8b791s6wg")))) + (build-system python-build-system) + (propagated-inputs + `(("python-mypy-extensions" ,python-mypy-extensions) + ("python-typing-extensions" ,python-typing-extensions))) + (home-page "https://github.com/ilevkivskyi/typing_inspect") + (synopsis "API for inspection of types in the Python @code{typing} module") + (description + "The @code{typing_inspect} module defines experimental API for runtime +inspection of types defined in the Python standard typing module.") + (license license:expat))) + +(define-public python-lazy-object-proxy + (package + (name "python-lazy-object-proxy") + (version "1.4.3") + (source (origin + (method url-fetch) + (uri (pypi-uri "lazy-object-proxy" version)) + (sha256 + (base32 + "1w1aaay424ciz8fz3fkzxb0pxzfxn184f2whpyn4fx72bn50x47k")))) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm))) + (build-system python-build-system) + (home-page "https://github.com/ionelmc/python-lazy-object-proxy") + (synopsis "Lazy object proxy for python") + (description + "Lazy object proxy is an object that wraps a callable but defers the call +until the object is actually required, and caches the result of said call.") + (license license:bsd-2))) + +(define-public python2-lazy-object-proxy + (package-with-python2 python-lazy-object-proxy)) + +(define-public python-dnspython + (package + (name "python-dnspython") + (version "1.16.0") + (source (origin + (method url-fetch) + (uri (string-append "http://www.dnspython.org/kits/" + version "/dnspython-" version ".tar.gz")) + (sha256 + (base32 + "1yaw7irazy42n0kdhlk7wyg8ki34rxcnc5xbc1wfwy245b0wbxab")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; XXX: requires internet access + (home-page "http://www.dnspython.org") + (synopsis "DNS toolkit for Python") + (description + "dnspython is a DNS toolkit for Python. It supports almost all record +types. It can be used for queries, zone transfers, and dynamic updates. +It supports TSIG authenticated messages and EDNS0.") + (license license:expat))) + +(define-public python2-dnspython + (package-with-python2 python-dnspython)) + +(define-public python-py3dns + (package + (name "python-py3dns") + (version "3.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "py3dns" version)) + (sha256 + (base32 + "1r25f0ys5p37bhld7m7n4gb0lrysaym3w318w2f8bncq7r3d81qz")))) + (build-system python-build-system) + ;; This package wants to read /etc/resolv.conf. We can't patch it without + ;; removing functionality so we copy from Nix and "just don't build it". + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-source + (lambda _ + (substitute* "setup.py" + (("import DNS") "") + (("DNS.__version__") (string-append "\"" ,version "\""))) + #t))) + #:tests? #f)) ; Also skip the tests. + (home-page "https://launchpad.net/py3dns") + (synopsis "Python 3 DNS library") + (description "This Python 3 module provides a DNS API for looking up DNS +entries from within Python 3 modules and applications. This module is a +simple, lightweight implementation.") + (license license:psfl))) + +(define-public python-email-validator + (package + (name "python-email-validator") + (version "1.0.2") + (source + (origin (method url-fetch) + (uri (pypi-uri "email_validator" version)) + (sha256 + (base32 + "1ja9149l9ck5n45a72h3is7v476hjny5ybxbcamx1nw6iplsm7k6")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-before 'build 'use-dnspython + (lambda _ + (substitute* "setup.py" + (("dnspython3") "dnspython")) + #t))))) + (propagated-inputs + `(("python-dnspython" ,python-dnspython) + ("python-idna" ,python-idna))) + (home-page "https://github.com/JoshData/python-email-validator") + (synopsis "Email address validation library for Python") + (description + "This library validates email address syntax and deliverability.") + (license license:cc0))) + +(define-public python2-email-validator + (package-with-python2 python-email-validator)) + +(define-public python-ukpostcodeparser + (package + (name "python-ukpostcodeparser") + (version "1.0.3") + (source (origin + (method url-fetch) + (uri (pypi-uri "UkPostcodeParser" version)) + (sha256 + (base32 + "1jwg9z4rz51mcka1821rwgycsd0mcicyp1kiwjfa2kvg8bm9p2qd")))) + (build-system python-build-system) + (home-page "https://github.com/hamstah/ukpostcodeparser") + (synopsis "UK Postcode parser for Python") + (description + "This library provides the @code{parse_uk_postcode} function for +parsing UK postcodes.") + (license license:expat))) + +(define-public python2-ukpostcodeparser + (package-with-python2 python-ukpostcodeparser)) + +(define-public python-faker + (package + (name "python-faker") + (version "4.0.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "Faker" version)) + (sha256 + (base32 + "13qq485ydxmdnqn3xbfv1xfyqbf9qfnfw33v1vw5l6jyy9p8cgrd")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (invoke "python" "-m" "pytest" "-v")))))) + (native-inputs + `(;; For testing + ("python-freezegun" ,python-freezegun) + ("python-pytest" ,python-pytest) + ("python-random2" ,python-random2) + ("python-ukpostcodeparser" ,python-ukpostcodeparser) + ("python-validators" ,python-validators))) + (propagated-inputs + `(("python-dateutil" ,python-dateutil) + ("python-text-unidecode" ,python-text-unidecode))) + (home-page "https://github.com/joke2k/faker") + (synopsis "Python package that generates fake data") + (description + "Faker is a Python package that generates fake data such as names, +addresses, and phone numbers.") + (license license:expat) + (properties `((python2-variant . ,(delay python2-faker)))))) + +;; Faker 4.0 dropped Python 2 support, so we stick with this older version here. +(define-public python2-faker + (let ((base (package-with-python2 (strip-python2-variant + python-faker)))) + (package + (inherit base) + (version "3.0.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "Faker" version)) + (sha256 + (base32 + "11cr0qvspkdh6198rqy56qildk7bnp6llj8kyy1dan5sp5n4dxy7")))) + (native-inputs + `(("python-mock" ,python2-mock) + ,@(package-native-inputs base))) + (propagated-inputs + `(("python2-ipaddress" ,python2-ipaddress) + ("python2-six" ,python2-six) + ,@(package-propagated-inputs base)))))) + +(define-public python-pyaml + (package + (name "python-pyaml") + (version "18.11.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "pyaml" version)) + (sha256 + (base32 + "0fi604ix8lbpj1266q7js6szm771saprdzzcdwmj43wy83694qmr")))) + (build-system python-build-system) + (native-inputs + `(("python-unidecode" ,python-unidecode))) + (propagated-inputs + `(("python-pyyaml" ,python-pyyaml))) + (home-page "https://github.com/mk-fg/pretty-yaml") + (synopsis "YAML pretty-print library for Python") + (description + "pyaml is a PyYAML based python module to produce pretty and readable +YAML-serialized data.") + (license license:wtfpl2))) + +(define-public python2-pyaml + (package-with-python2 python-pyaml)) + +(define-public python-backpack + (package + (name "python-backpack") + (version "0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "backpack" version)) + (sha256 + (base32 + "14rq1mvm0jda90lcx9gyyby9dvq4x3js2cmxvd6vl4686ixwyqh1")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-nose" ,python-nose))) + (propagated-inputs + `(("python-simplejson" ,python-simplejson))) + (home-page "https://github.com/sdispater/backpack") + (synopsis "Utilities for working with Python collections") + (description "Backpack provides some useful utilities for working with +collections of data.") + (license license:expat))) + +(define-public python2-backpack + (package-with-python2 python-backpack)) + +(define-public python-prompt-toolkit + (package + (name "python-prompt-toolkit") + (version "3.0.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "prompt_toolkit" version)) + (sha256 + (base32 + "1j3x5s4gp4ih73sbcni0a0vffbzvrxbrbnkvb3fzjgxn810ilgan")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'check) + (add-after 'install 'post-install-check + (lambda* (#:key inputs outputs #:allow-other-keys) + ;; HOME is needed for the test + ;; "test_pathcompleter_can_expanduser". + (setenv "HOME" "/tmp") + (add-installed-pythonpath inputs outputs) + (invoke "py.test")))))) + (propagated-inputs + `(("python-wcwidth" ,python-wcwidth))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page + "https://github.com/prompt-toolkit/python-prompt-toolkit") + (synopsis "Library for building command line interfaces in Python") + (description + "Prompt-Toolkit is a library for building interactive command line +interfaces in Python. It's like GNU Readline but it also features syntax +highlighting while typing, out-of-the-box multi-line input editing, advanced +code completion, incremental search, support for Chinese double-width +characters, mouse support, and auto suggestions.") + (license license:bsd-3))) + +(define-public python-prompt-toolkit-2 + (package (inherit python-prompt-toolkit) + (name "python-prompt-toolkit") + (version "2.0.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "prompt_toolkit" version)) + (sha256 + (base32 + "0fgacqk73w7s932vy46pan2yp8rvjmlkag20xvaydh9mhf6h85zx")))) + (propagated-inputs + `(("python-wcwidth" ,python-wcwidth) + ("python-six" ,python-six) + ("python-pygments" ,python-pygments))))) + +(define-public python2-prompt-toolkit + (package-with-python2 python-prompt-toolkit-2)) + +(define-public python-prompt-toolkit-1 + (package (inherit python-prompt-toolkit-2) + (version "1.0.15") + (source + (origin + (method url-fetch) + (uri (pypi-uri "prompt_toolkit" version ".tar.gz")) + (sha256 + (base32 + "05v9h5nydljwpj5nm8n804ms0glajwfy1zagrzqrg91wk3qqi1c5")))))) + +(define-public python2-prompt-toolkit-1 + (package-with-python2 python-prompt-toolkit-1)) + +(define-public python-jedi + (package + (name "python-jedi") + (version "0.17.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jedi" version)) + (sha256 + (base32 "080xyf97ifabdz7jp8clg00b8zv5g33fva1fb2xf80q6fndpvvc6")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (setenv "HOME" "/tmp") + (invoke "python" "-m" "pytest" "-vv")))))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-docopt" ,python-docopt))) + (propagated-inputs + `(("python-parso" ,python-parso))) + (home-page "https://github.com/davidhalter/jedi") + (synopsis "Autocompletion and static analysis library for Python") + (description + "Jedi is a static analysis tool for Python that can be used in Integrated +Development Environments (@dfn{IDE}s) and text editors. It understands Python +on a deeper level than many other static analysis frameworks for Python. + +Jedi understands docstrings and you can use Jedi autocompletion in your REPL as +well.") + (license license:expat))) + +(define-public python2-jedi + (package-with-python2 python-jedi)) + +(define-public ptpython + (package + (name "ptpython") + (version "0.34") + (source (origin + (method url-fetch) + (uri (pypi-uri "ptpython" version)) + (sha256 + (base32 + "1mmbiyzf0n8hm7z2a562x7w5cbl6jc0zsk6vp40q1z4cyblv1k13")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; FIXME: No tests in pypi tarball. + (propagated-inputs + `(("python-docopt" ,python-docopt) + ("python-jedi" ,python-jedi) + ("python-prompt-toolkit" ,python-prompt-toolkit) + ("python-pygments" ,python-pygments))) + (home-page "https://github.com/jonathanslenders/ptpython") + (synopsis "Python Read-Eval-Print-Loop with nice IDE-like features") + (description + "ptpython is a Python read-eval-print loop with IDE-like features. +It supports syntax highlighting, multiline editing, autocompletion, mouse, +color schemes, bracketed paste, Vi and Emacs keybindings, Chinese characters +etc.") + (license license:bsd-3) + (properties `((python2-variant . ,(delay ptpython-2)))))) + +(define-public ptpython-2 + (let ((base (package-with-python2 (strip-python2-variant ptpython)))) + (package + (inherit base) + (name "ptpython2")))) + +(define-public python-stem + (package + (name "python-stem") + (version "1.8.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "stem" version)) + (sha256 + (base32 + "1hk8alc0r4m669ggngdfvryndd0fbx0w62sclcmg55af4ak8xd50")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "./run_tests.py" "--unit") + #t))))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pycodestyle" ,python-pycodestyle) + ("python-pyflakes" ,python-pyflakes))) + (home-page "https://stem.torproject.org/") + (synopsis + "Python controller library that allows applications to interact with Tor") + (description + "Stem is a Python controller library for Tor. With it you can use Tor's +control protocol to script against the Tor process and read descriptor data +relays publish about themselves.") + (license license:lgpl3))) + +(define-public python2-stem + (package-with-python2 python-stem)) + +(define-public python-pyserial + (package + (name "python-pyserial") + (version "3.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyserial" version)) + (sha256 + (base32 + "09y68bczw324a4jb9a1cfwrbjhq179vnfkkkrybbksp0vqgl0bbf")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; FIXME: 3/49 tests are failing. + ;; #:phases + ;; (modify-phases %standard-phases + ;; (replace 'check + ;; (lambda _ + ;; (zero? (system* "python" "test/run_all_tests.py" "loop://"))))))) + (home-page + "https://github.com/pyserial/pyserial") + (synopsis "Python Serial Port Bindings") + (description "@code{pyserial} provide serial port bindings for Python. It +supports different byte sizes, stop bits, parity and flow control with RTS/CTS +and/or Xon/Xoff. The port is accessed in RAW mode.") + (license license:bsd-3))) + +(define-public python2-pyserial + (package-with-python2 python-pyserial)) + +(define-public python-kivy + (package + (name "python-kivy") + (version "1.10.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Kivy" version)) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1zzxjdp78hfjjiklzr82l4zwibwcq4j6kgicspqs6iyyfn5yisbw")))) + (build-system python-build-system) + (arguments + `(#:tests? #f ; Tests require many optional packages + #:phases + (modify-phases %standard-phases + (add-after 'patch-generated-file-shebangs 'set-sdl-paths + (lambda* (#:key inputs #:allow-other-keys) + (setenv "KIVY_SDL2_PATH" + (string-append (assoc-ref inputs "sdl-union") + "/include/SDL2")) + #t))))) + (native-inputs + `(("pkg-config" ,pkg-config) + ("python-cython" ,python-cython))) + (inputs + `(("gstreamer" ,gstreamer) + ("mesa" ,mesa) + ("sdl-union" + ,(sdl-union (list sdl2 sdl2-image sdl2-mixer sdl2-ttf))))) + (home-page "https://kivy.org") + (synopsis + "Multitouch application framework") + (description + "A software library for rapid development of +hardware-accelerated multitouch applications.") + (license license:expat))) + +(define-public python2-kivy + (package-with-python2 python-kivy)) + +(define-public python-binaryornot + (package + (name "python-binaryornot") + (version "0.4.4") + (source (origin + (method url-fetch) + (uri (pypi-uri "binaryornot" version)) + (sha256 + (base32 + "0qc006986rb6bcbmiymwgcl1mns2jphr1j7sr7nk41nlr7gh359m")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-tests + (lambda _ + ;; TypeError: binary() got an unexpected keyword argument + ;; 'average_size'. + (substitute* "tests/test_check.py" + (("average_size=512") "")) + #t))))) + (propagated-inputs + `(("python-chardet" ,python-chardet) + ("python-hypothesis" ,python-hypothesis))) + (home-page "https://github.com/audreyr/binaryornot") + (synopsis "Package to check if a file is binary or text") + (description "Ultra-lightweight pure Python package to check if a file is +binary or text.") + (license license:bsd-3) + (properties `((python2-variant . ,(delay python2-binaryornot)))))) + +(define-public python2-binaryornot + (let ((base (package-with-python2 (strip-python2-variant python-binaryornot)))) + (package (inherit base) + (propagated-inputs + `(("python2-enum34" ,python2-enum34) + ,@(package-propagated-inputs base)))))) + +(define-public python-binwalk + (package + (name "python-binwalk") + (version "2.2.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/ReFirmLabs/binwalk") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1bxgj569fzwv6jhcbl864nmlsi9x1k1r20aywjxc8b9b1zgqrlvc")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'set-pythonpath + (lambda _ + (setenv "PYTHONPATH" + (string-append + (getcwd) "/src/" + ":" (getenv "PYTHONPATH"))) + (setenv "HOME" "") + #t))))) + (native-inputs + `(("python-coverage" ,python-coverage) + ("python-nose" ,python-nose))) + (home-page "https://github.com/ReFirmLabs/binwalk") + (synopsis "Firmware analysis tool") + (description "Binwalk is a tool for analyzing, reverse engineering, and +extracting firmware images") + (license license:expat))) + +(define-public python-nltk + (package + (name "python-nltk") + (version "3.2.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "nltk" version)) + (sha256 + (base32 + "0skxbhnymwlspjkzga0f7x1hg3y50fwpfghs8g8k7fh6f4nknlym")))) + (build-system python-build-system) + (arguments + '(;; The tests require some extra resources to be downloaded. + ;; TODO Try packaging these resources. + #:tests? #f)) + (home-page "http://nltk.org/") + (synopsis "Natural Language Toolkit") + (description "It provides interfaces to over 50 corpora and lexical +resources such as WordNet, along with a suite of text processing libraries +for classification, tokenization, stemming, tagging, parsing, and semantic +reasoning, wrappers for natural language processing libraries.") + (license license:asl2.0))) + +(define-public python2-nltk + (package-with-python2 python-nltk)) + +(define-public python-pymongo + (package + (name "python-pymongo") + (version "3.7.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "pymongo" version)) + (sha256 + (base32 + "0zis4707r9hdg5qgkhp3wss9camr9h56ixyfc8n9dxwlnnly4x4c")))) + (build-system python-build-system) + (propagated-inputs + `(("python-certifi" ,python-certifi))) + (home-page "https://github.com/mongodb/mongo-python-driver") + (synopsis "Python driver for MongoDB") + (description "Python driver for MongoDB.") + (license license:asl2.0))) + +(define-public python2-pymongo + (package-with-python2 python-pymongo)) + +(define-public python-consul + (package + (name "python-consul") + (version "0.6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-consul" version)) + (sha256 + (base32 + "0rfyxcy4cr3x848vhx876ifalxd5ghq6l5x813m49h4vq2d4jiq8")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; The tests are not distributed + (propagated-inputs + `(("python-requests" ,python-requests) + ("python-six" ,python-six))) + (home-page "https://github.com/cablehead/python-consul") + (synopsis "Python client for Consul") + (description + "Python client for @url{http://www.consul.io/,Consul}, a tool for service +discovery, monitoring and configuration.") + (license license:expat))) + +(define-public python2-consul + (package-with-python2 python-consul)) + +(define-public python-schematics + (package + (name "python-schematics") + (version "1.1.1") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/schematics/schematics") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0xdqskycznqc7mfp60bhw1zq8wx7yx1dvmbq3brnm1dx3xnqa0zd")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six))) + (arguments + ;; The tests require a bunch of not very nice packages with fixed + ;; version requirements (e.g. python-coveralls). + `(#:tests? #f)) + (home-page "https://github.com/schematics/schematics") + (synopsis "Python Data Structures for Humans") + (description "Python Data Structures for Humans.") + (license license:bsd-3))) + +(define-public python2-schematics + (package-with-python2 python-schematics)) + +(define-public python-odfpy + (package + (name "python-odfpy") + (version "1.4.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "odfpy" version)) + (sha256 + (base32 + "1v1qqk9p12qla85yscq2g413l3qasn6yr4ncyc934465b5p6lxnv")))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (setenv "PYTHONPATH" (string-append "./build/lib:" + (getenv "PYTHONPATH"))) + (invoke "pytest" "-vv")))))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-defusedxml" ,python-defusedxml))) + (home-page "https://github.com/eea/odfpy") + (synopsis "Python API and tools to manipulate OpenDocument files") + (description "Collection of libraries and utility programs written in +Python to manipulate OpenDocument 1.2 files.") + (license + ;; The software is mainly dual GPL2+ and ASL2.0, but includes a + ;; number of files with other licenses. + (list license:gpl2+ license:asl2.0 license:lgpl2.1+ license:cc-by-sa3.0)))) + +(define-public python2-odfpy + (package-with-python2 python-odfpy)) + +(define-public python-natsort + (package + (name "python-natsort") + (version "7.0.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "natsort" version)) + (sha256 + (base32 + "1ksqfai72dbcfbwx43pxl658j59mx2rvqypjy1fk0ax2qd6lccx6")))) + (build-system python-build-system) + (arguments + `(#:modules ((guix build utils) + (guix build python-build-system) + (srfi srfi-1) + (srfi srfi-26) + (ice-9 ftw)) + #:phases + (modify-phases %standard-phases + (add-before 'check 'set-cachedir + ;; Tests require write access to $HOME by default + (lambda _ (setenv "PYTHON_EGG_CACHE" "/tmp") #t)) + (replace 'check + (lambda _ + (let ((cwd (getcwd))) + (setenv "PYTHONPATH" + (string-append + cwd "/build/" + (find (cut string-prefix? "lib" <>) + (scandir (string-append cwd "/build"))) + ":" + (getenv "PYTHONPATH"))) + (invoke "pytest" "-v"))))))) + (native-inputs + `(("python-hypothesis" ,python-hypothesis) + ("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-mock" ,python-pytest-mock) + ("python-pytest" ,python-pytest))) + (propagated-inputs ; TODO: Add python-fastnumbers. + `(("python-pyicu" ,python-pyicu))) + (home-page "https://github.com/SethMMorton/natsort") + (synopsis "Natural sorting for python and shell") + (description + "Natsort lets you apply natural sorting on lists instead of +lexicographical. If you use the built-in @code{sorted} method in python +on a list such as @code{[@code{a20}, @code{a9}, @code{a1}, @code{a4}, +@code{a10}]}, it would be returned as @code{[@code{a1}, @code{a10}, @code{a20}, +@code{a4}, @code{a9}]}. Natsort provides a function @code{natsorted} that +identifies numbers and sorts them separately from strings. It can also sort +version numbers, real numbers, mixed types and more, and comes with a shell +command @command{natsort} that exposes this functionality in the command line.") + (license license:expat) + (properties `((python2-variant . ,(delay python2-natsort)))))) + +;; Natsort 6.x are the last versions with support for Python 2. +(define-public python2-natsort + (let ((base (package-with-python2 (strip-python2-variant python-natsort)))) + (package (inherit base) + (version "6.2.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "natsort" version)) + (sha256 + (base32 + "1mc9hbh6fv76xyz13frm7dgi05cf74f9j5wvcyjiy5234gylz565")))) + (native-inputs + `(("python2-pathlib" ,python2-pathlib) + ,@(package-native-inputs base)))))) + +(define-public glances + (package + (name "glances") + (version "3.1.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Glances" version)) + (sha256 + (base32 "0dc47gbvp9a3wxppdqihxpglxxaxbj3hcvzgcxxq8zcsciah3plq")) + (modules '((guix build utils))) + (snippet + '(begin + ;; Glances phones PyPI for weekly update checks by default. + ;; Disable these. The user can re-enable them if desired. + (substitute* "glances/outdated.py" + (("^(.*)self\\.load_config\\(config\\)\n" line indentation) + (string-append indentation + "self.args.disable_check_update = True\n" + line))) + #t)))) + (build-system python-build-system) + (propagated-inputs + `(("python-future" ,python-future) + ("python-psutil" ,python-psutil))) + (home-page "https://github.com/nicolargo/glances") + (synopsis "Cross-platform curses-based monitoring tool") + (description + "Glances is a curses-based monitoring tool for a wide variety of platforms. +Glances uses the PsUtil library to get information from your system. It +monitors CPU, load, memory, network bandwidth, disk I/O, disk use, and more.") + (license license:lgpl3+))) + +(define-public python-glances + (deprecated-package "python-glances" glances)) + +(define-public python-graphql-core + (package + (name "python-graphql-core") + (version "0.5.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "graphql-core" version)) + (sha256 + (base32 + "0rsaarx2sj4xnw9966rhh4haiqaapm4lm2mfqm48ywd51j5vh1a0")))) + (build-system python-build-system) + (arguments + `(#:tests? #f ; Tests require the unpackaged pytest-benchmark. + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-hardcoded-version + (lambda _ (substitute* + "setup.py" + (("'gevent==1.1rc1'") "'gevent'")) + #t))))) + (native-inputs + `(("python-gevent" ,python-gevent) + ("python-mock" ,python-mock) + ("python-pytest-mock" ,python-pytest-mock))) + (propagated-inputs + `(("python-promise" ,python-promise) + ("python-six" ,python-six))) + (home-page "https://github.com/graphql-python/graphql-core") + (synopsis "GraphQL implementation for Python") + (description + "GraphQL implementation for Python. GraphQL is a data query language and +runtime designed and used to request and deliver data to mobile and web apps. +This library is a port of @url{https://github.com/graphql/graphql-js,graphql-js} +to Python.") + (license license:expat))) + +(define-public python2-graphql-core + (package-with-python2 python-graphql-core)) + +(define-public python-graphql-relay + (package + (name "python-graphql-relay") + (version "0.4.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "graphql-relay" version)) + (sha256 + (base32 + "1nv5dxcj59zv31qvl8bd142njmxcmymny2dz3br1l2cpbljbf5i7")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; The tests are not distributed + (propagated-inputs + `(("python-graphql-core" ,python-graphql-core) + ("python-promise" ,python-promise) + ("python-six" ,python-six))) + (home-page "https://github.com/graphql-python/graphql-relay-py") + (synopsis "Relay implementation for Python") + (description + "This is a library to allow the easy creation of Relay-compliant servers +using the GraphQL Python reference implementation of a GraphQL server. It +should be noted that the code is a exact port of the original +@url{https://github.com/graphql/graphql-relay-js,graphql-relay js implementation} +from Facebook.") + (license license:expat))) + +(define-public python2-graphql-relay + (package-with-python2 python-graphql-relay)) + +(define-public python-graphene + (package + (name "python-graphene") + (version "0.10.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "graphene" version)) + (sha256 + (base32 + "09zhac7igh9ixdz0ay6csy35b40l1jwbf2wrbxmgxwfhy51iy06q")))) + (build-system python-build-system) + (propagated-inputs + `(("python-graphql-core" ,python-graphql-core) + ("python-graphql-relay" ,python-graphql-relay) + ("python-iso8601" ,python-iso8601) + ("python-promise" ,python-promise) + ("python-six" ,python-six))) + (arguments + `(#:tests? #f)) ; no tests/ in the PyPI tarball + (home-page "https://graphene-python.org/") + (synopsis "GraphQL Framework for Python") + (description + "Graphene is a Python library for building GraphQL schemas/types. +A GraphQL schema describes your data model, and provides a GraphQL server +with an associated set of resolve methods that know how to fetch data.") + (properties `((python2-variant . ,(delay python2-graphene)))) + (license license:expat))) + +(define-public python2-graphene + (let ((base (package-with-python2 + (strip-python2-variant python-graphene)))) + (package (inherit base) + (native-inputs + `(("python2-sqlalchemy" ,python2-sqlalchemy) + ,@(package-native-inputs base)))))) + +(define-public python-nautilus + (package + (name "python-nautilus") + (version "0.4.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri "nautilus" version)) + (sha256 + (base32 + "01hwzjc1zshk4vvxrcghm398fpy4jls66dyz06g07mrwqif8878p")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) ; fails to import test modules + (propagated-inputs + `(("python-bcrypt" ,python-bcrypt) + ("python-click" ,python-click) + ("python-consul" ,python-consul) + ("python-graphene" ,python-graphene) + ("python-jinja2" ,python-jinja2) + ("python-peewee" ,python-peewee) + ("python-pika" ,python-pika) + ("python-tornado" ,python-tornado) + ("python-wtforms" ,python-wtforms))) + (native-inputs + `(("python-nose2" ,python-nose2))) + (home-page "https://github.com/AlecAivazis/nautilus") + (synopsis "Library for creating microservice applications") + (description + "Nautilus is a framework for flux based microservices that looks to +provide extendible implementations of common aspects of a cloud so that you can +focus on building massively scalable web applications.") + (license license:expat))) + +(define-public python-random2 + (package + (name "python-random2") + (version "1.0.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "random2" version ".zip")) + (sha256 + (base32 + "01y0s4747plsx8fdnxy0nz83dp69naddz58m81r9h0s1qfm31b9l")))) + (build-system python-build-system) + (native-inputs `(("unzip" ,unzip))) + (home-page "http://pypi.python.org/pypi/random2") + (synopsis "Python 3 version of the Python 2 @code{random} module") + (description + "This package provides a Python 3 ported version of Python 2.7’s +@code{random} module. It has also been back-ported to work in Python 2.6. + +In Python 3, the implementation of @code{randrange()} was changed, so that +even with the same seed you get different sequences in Python 2 and 3. + +This package closes that gap, allowing stable random number generation +between the different Python versions.") + (license license:psfl))) + +(define-public python2-random2 + (package-with-python2 python-random2)) + +(define-public python-snowballstemmer + (package + (name "python-snowballstemmer") + (version "2.0.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "snowballstemmer" version)) + (sha256 + (base32 + "0ligk61idlz8kkgd5hpip5whm172riwglb6xydii7h62yhysqfyz")))) + (build-system python-build-system) + (arguments + `(;; No tests exist + #:tests? #f)) + (home-page "https://github.com/shibukawa/snowball_py") + (synopsis "Snowball stemming library collection for Python") + (description "This package provides 16 word stemmer algorithms generated +from Snowball algorithms. It includes the 15 original ones plus the Poerter +English stemmer.") + (license license:bsd-3))) + +(define-public python2-snowballstemmer + (package-with-python2 python-snowballstemmer)) + +(define-public python-setproctitle + (package + (name "python-setproctitle") + (version "1.1.10") + (source + (origin + (method url-fetch) + (uri (pypi-uri "setproctitle" version)) + (sha256 + (base32 + "163kplw9dcrw0lffq1bvli5yws3rngpnvrxrzdw89pbphjjvg0v2")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-before 'check 'patch-Makefile + ;; Stricly this is only required for the python2 variant. + ;; But adding a phase in an inherited package seems to be + ;; cumbersum. So we patch even for python3. + (lambda _ + (let ((nose (assoc-ref %build-inputs "python2-nose"))) + (when nose + (substitute* "Makefile" + (("\\$\\(PYTHON\\) [^ ]which nosetests[^ ] ") + (string-append nose "/bin/nosetests ")))) + #t))) + (replace 'check + (lambda _ + (setenv "PYTHON" (or (which "python3") (which "python"))) + (setenv "PYCONFIG" (if (which "python3-config") + "python3-config --embed" + "python-config")) + (setenv "CC" "gcc") + ;; No need to extend PYTHONPATH to find the built package, since + ;; the Makefile will build anyway + (invoke "make" "check")))))) + (native-inputs + `(("procps" ,procps))) ; required for tests + (home-page "https://github.com/dvarrazzo/py-setproctitle") + (synopsis + "Setproctitle implementation for Python to customize the process title") + (description "The library allows a process to change its title (as displayed +by system tools such as ps and top). + +Changing the title is mostly useful in multi-process systems, for +example when a master process is forked: changing the children's title +allows identifying the task each process is busy with. The technique +is used by PostgreSQL and the OpenSSH Server for example.") + (license license:bsd-3) + (properties `((python2-variant . ,(delay python2-setproctitle)))))) + +(define-public python2-setproctitle + (let ((base (package-with-python2 + (strip-python2-variant python-setproctitle)))) + (package + (inherit base) + (native-inputs `(("python2-nose" ,python2-nose) + ,@(package-native-inputs base)))))) + +(define-public python-validictory + (package + (name "python-validictory") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "validictory" version)) + (sha256 + (base32 + "1zf1g9sw47xzp5f80bd94pb42j9yqv82lcrgcvdwr6nkaphfi37q")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'bootstrap + ;; Move the tests out of the package directory to avoid + ;; packaging them. + (lambda* _ + (rename-file "validictory/tests" "tests") + (delete-file "tests/__init__.py"))) + (replace 'check + (lambda _ + ;; Extend PYTHONPATH so the built package will be found. + (setenv "PYTHONPATH" + (string-append (getcwd) "/build/lib:" + (getenv "PYTHONPATH"))) + (invoke "py.test" "-vv" )))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page + "https://github.com/jamesturk/validictory") + (synopsis "General purpose Python data validator") + (description "It allows validation of arbitrary Python data structures. + +The schema format is based on the JSON Schema +proposal (http://json-schema.org), so combined with json the library is also +useful as a validator for JSON data.") + (license license:expat))) + +(define-public python2-validictory + (package-with-python2 python-validictory)) + +(define-public python-pyelftools + (package + (name "python-pyelftools") + (version "0.25") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyelftools" version)) + (sha256 + (base32 + "090vdksbz341f7ljvr0zswblw4lspa8qaiikzyjkf318arpxmil9")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'set-pythonpath + (lambda _ + (setenv "PYTHONPATH" + (string-append + (getcwd) "/test/" + ":" (getenv "PYTHONPATH"))) + #t))))) + (home-page + "https://github.com/eliben/pyelftools") + (synopsis + "Analyze binary and library file information") + (description "This Python library provides interfaces for parsing and +analyzing two binary and library file formats; the Executable and Linking +Format (ELF), and debugging information in the Debugging With Attributed +Record Format (DWARF).") + (license license:public-domain))) + +(define-public python-pyev + (package + (name "python-pyev") + (version "0.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyev" version)) + (sha256 + (base32 + "0rf603lc0s6zpa1nb25vhd8g4y337wg2wyz56i0agsdh7jchl0sx")))) + (build-system python-build-system) + (arguments + `(#:tests? #f ; no test suite + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch + (lambda* (#:key inputs #:allow-other-keys) + (let ((libev (string-append (assoc-ref inputs "libev") + "/lib/libev.so.4"))) + (substitute* "setup.py" + (("libev_dll_name = find_library\\(\\\"ev\\\"\\)") + (string-append "libev_dll_name = \"" libev "\""))))))))) + (inputs + `(("libev" ,libev))) + (home-page "http://pythonhosted.org/pyev/") + (synopsis "Python libev interface") + (description "Pyev provides a Python interface to libev.") + (license license:gpl3))) + +(define-public python2-pyev + (package-with-python2 python-pyev)) + +(define-public python-imagesize + (package + (name "python-imagesize") + (version "1.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "imagesize" version)) + (sha256 + (base32 + "1cd24x0vqbd6c8ym1n21qc0aj54mfb7rzdqglmwk9xxixajbbxmi")))) + (build-system python-build-system) + (home-page "https://github.com/shibukawa/imagesize_py") + (synopsis "Gets image size of files in various formats in Python") + (description + "This package allows determination of image size from +PNG, JPEG, JPEG2000 and GIF files in pure Python.") + (license license:expat))) + +(define-public python2-imagesize + (package-with-python2 python-imagesize)) + +(define-public python-termstyle + (package + (name "python-termstyle") + (version "0.1.11") + (source + (origin + (method url-fetch) + (uri (pypi-uri "termstyle" version)) + (sha256 + (base32 + "17wzkkcqy5zc0g68xlad3kcv66iw14d2pwqc0h9420gak0vbhx7g")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "python" "test3.py")))))) + (home-page "https://github.com/gfxmonk/termstyle") + (synopsis "Console text coloring for Python") + (description "This package provides console text coloring for Python.") + (license license:bsd-3))) + +(define-public python-argcomplete + (package + (name "python-argcomplete") + (version "1.11.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "argcomplete" version)) + (sha256 + (base32 + "0h1przxffrhqvi46k40pzjsvdrq4zc3sl1pc96kkigqppq0vdrss")) + (patches (search-patches "python-argcomplete-1.11.1-fish31.patch")))) + (build-system python-build-system) + (native-inputs + `(("python-coverage" ,python-coverage) + ("python-flake8" ,python-flake8) + ("python-pexpect" ,python-pexpect) + ("python-wheel" ,python-wheel) + ("tcsh" ,tcsh) + ("fish" ,fish) + ("bash-full" ,bash))) ;full Bash for 'test_file_completion' + (home-page "https://github.com/kislyuk/argcomplete") + (synopsis "Shell tab completion for Python argparse") + (description "argcomplete provides extensible command line tab completion +of arguments and options for Python scripts using @code{argparse}. It's +particularly useful for programs with many options or sub-parsers that can +dynamically suggest completions; for example, when browsing resources over the +network.") + (license license:asl2.0))) + +(define-public python2-argcomplete + (package-with-python2 python-argcomplete)) + +(define-public python-csscompressor + (package + (name "python-csscompressor") + (version "0.9.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "csscompressor" version)) + (sha256 + (base32 + "018ssffvlpnc1salmnpyl52c11glzzwj4k9f757hl4pkpjnjp8mg")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "py.test")))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/sprymix/csscompressor") + (synopsis "Python port of YUI CSS Compressor") + (description + "This package provides a python port of YUI CSS Compressor.") + (license license:bsd-3))) + +(define-public python-rcssmin + (package + (name "python-rcssmin") + (version "1.0.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rcssmin" version)) + (sha256 + (base32 + "0w42l4dhxghcz7pj3q7hkxp015mvb8z2cq9sfxbl31npsfavd1ya")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "python" "run_tests.py" "tests")))))) + (home-page "http://opensource.perlig.de/rcssmin/") + (synopsis "CSS Minifier") + (description "The minifier is based on the semantics of the YUI compressor, +which itself is based on the rule list by Isaac Schlueter.") + (license license:asl2.0))) + +(define-public python-rjsmin + (package + (name "python-rjsmin") + (version "1.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rjsmin" version)) + (sha256 + (base32 + "0cmc72rlkvzz8fl89bc83czkx0pcvhzj7yn7m29r8pgnf5fcfpdi")) + (modules '((guix build utils))) + (snippet + '(begin + (for-each delete-file (find-files "bench" "\\.js$")) + #t)))) + (build-system python-build-system) + (arguments + '(#:tests? #f ; Not all test files included. + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key inputs outputs tests? #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (if tests? + (invoke "py.test" "-vv" "tests") + #t)))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "http://opensource.perlig.de/rjsmin/") + (synopsis "Javascript Minifier") + (description "@code{rJSmin} is a javascript minifier written in Python. The +minifier is based on the semantics of jsmin.c by Douglas Crockford. The module +is a re-implementation aiming for speed, so it can be used at runtime (rather +than during a preprocessing step).") + (license license:asl2.0))) + +(define-public python-xopen + (package + (name "python-xopen") + (version "0.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "xopen" version)) + (sha256 + (base32 + "17xbrgi23l87yg6h0qcknssp2q812miiy33qw6v45v5gx0jwv5xh")))) + (build-system python-build-system) + (propagated-inputs + `(("python-setuptools-scm" ,python-setuptools-scm))) + (home-page "https://github.com/marcelm/xopen/") + (synopsis "Open compressed files transparently") + (description "This module provides an @code{xopen} function that works like +Python's built-in @code{open} function, but can also deal with compressed files. +Supported compression formats are gzip, bzip2 and, xz, and are automatically +recognized by their file extensions. The focus is on being as efficient as +possible on all supported Python versions.") + (license license:expat))) + +(define-public python2-xopen + (let ((base (package-with-python2 + (strip-python2-variant python-xopen)))) + (package + (inherit base) + (propagated-inputs `(("python2-bz2file" ,python2-bz2file) + ,@(package-propagated-inputs base)))))) + +(define-public python-cheetah + (package + (name "python-cheetah") + (version "3.2.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Cheetah3" version)) + (sha256 + (base32 + "0ar5dqjnqaw0c17mymd6xgd81jn9br9fblawr0x438v1571bkaya")))) + (build-system python-build-system) + (arguments + `(#:modules ((guix build utils) + (guix build python-build-system) + (ice-9 ftw) + (srfi srfi-1) + (srfi srfi-26)) + #:phases (modify-phases %standard-phases + (add-after 'unpack 'use-absolute-python + (lambda _ + (substitute* "Cheetah/CheetahWrapper.py" + (("#!/usr/bin/env python") + (string-append "#!" (which "python")))) + #t)) + (add-after 'unpack 'fix-tests + (lambda _ + (substitute* "Cheetah/Tests/ImportHooks.py" + (("os.path.dirname\\(__file__\\)") + (string-append "'" (getcwd) "/Cheetah/Tests'"))) + #t)) + (replace 'check + (lambda _ + (let ((cwd (getcwd))) + (setenv "PYTHONPATH" + (string-append + cwd "/build/" + (find (cut string-prefix? "lib" <>) + (scandir (string-append cwd "/build"))) + ":" (getenv "PYTHONPATH"))) + (setenv "PATH" + (string-append (getenv "PATH") + ":" cwd "/bin")) + (setenv "TMPDIR" "/tmp") + + (substitute* "Cheetah/Tests/Test.py" + (("unittest.TextTestRunner\\(\\)") + "unittest.TextTestRunner(verbosity=2)")) + + (invoke "python" "Cheetah/Tests/Test.py"))))))) + (propagated-inputs + `(("python-markdown" ,python-markdown))) ;optional + (home-page "https://cheetahtemplate.org/") + (synopsis "Template engine") + (description "Cheetah is a text-based template engine and Python code +generator. + +Cheetah can be used as a standalone templating utility or referenced as +a library from other Python applications. It has many potential uses, +but web developers looking for a viable alternative to ASP, JSP, PHP and +PSP are expected to be its principle user group. + +Features: +@enumerate +@item Generates HTML, SGML, XML, SQL, Postscript, form email, LaTeX, or any other + text-based format. +@item Cleanly separates content, graphic design, and program code. +@item Blends the power and flexibility of Python with a simple template language + that non-programmers can understand. +@item Gives template writers full access to any Python data structure, module, + function, object, or method in their templates. +@item Makes code reuse easy by providing an object-orientated interface to + templates that is accessible from Python code or other Cheetah templates. + One template can subclass another and selectively reimplement sections of it. +@item Provides a simple, yet powerful, caching mechanism that can dramatically + improve the performance of a dynamic website. +@item Compiles templates into optimized, yet readable, Python code. +@end enumerate") + (license (license:x11-style "file://LICENSE")))) + +(define-public python2-cheetah + (package-with-python2 python-cheetah)) + +(define-public python-dulwich + (package + (name "python-dulwich") + (version "0.19.16") + (source + (origin + (method url-fetch) + (uri (list (string-append "https://www.dulwich.io/releases/" + "dulwich-" version ".tar.gz") + (pypi-uri "dulwich" version))) + (sha256 + (base32 + "0l589jl0lxx59yq0p6vmgw0q0hmfh48iqwyy0x6g1dmz93262igp")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'fix-tests + (lambda* (#:key inputs #:allow-other-keys) + ;; The tests use Popen with a custom environment which doesn't + ;; include PATH. + (substitute* "dulwich/tests/compat/utils.py" + (("'git'") (string-append "'" + (which "git") + "'"))) + (substitute* '("dulwich/tests/test_repository.py" + "dulwich/tests/test_hooks.py") + (("#!/bin/sh") (string-append "#!" (which "sh")))) + (setenv "TEST_RUNNER" "unittest") + (setenv "PYTHONHASHSEED" "random") + #t))))) + (propagated-inputs + `(("python-fastimport" ,python-fastimport) + ("python-urllib3" ,python-urllib3))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-geventhttpclient" ,python-geventhttpclient) + ("git" ,git))) + (home-page "https://www.dulwich.io/") + (synopsis "Git implementation in Python") + (description "Dulwich is an implementation of the Git file formats and +protocols written in pure Python.") + ;; Can be used with either license. + (license (list license:asl2.0 license:gpl2+)))) + +(define-public python2-dulwich + (package-with-python2 python-dulwich)) + +(define-public python-pbkdf2 + (package + (name "python-pbkdf2") + (version "1.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pbkdf2" version)) + (sha256 + (base32 + "0yb99rl2mbsaamj571s1mf6vgniqh23v98k4632150hjkwv9fqxc")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (setenv "PYTHONPATH" + (string-append (getcwd) "/build/lib:" + (getenv "PYTHONPATH"))) + (invoke "python" "test/test_pbkdf2.py")))))) + (propagated-inputs + `(("python-pycrypto" ,python-pycrypto))) ; optional + (home-page "https://www.dlitz.net/software/python-pbkdf2/") + (synopsis "Password-based key derivation") + (description "This module implements the password-based key derivation +function, PBKDF2, specified in RSA PKCS#5 v2.0. + +PKCS#5 v2.0 Password-Based Key Derivation is a key derivation function which +is part of the RSA Public Key Cryptography Standards series. The provided +implementation takes a password or a passphrase and a salt value (and +optionally a iteration count, a digest module, and a MAC module) and provides +a file-like object from which an arbitrarly-sized key can be read.") + (license license:expat))) + +(define-public python2-pbkdf2 + (package-with-python2 python-pbkdf2)) + +(define-public python-qrcode + (package + (name "python-qrcode") + (version "6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "qrcode" version)) + (sha256 + (base32 "0sa3n298b9jpz6zn0birnjii3mg9sihjq28n9nzjlzv09y2m6ljh")))) + (build-system python-build-system) + (arguments + ;; FIXME: Tests require packaging 'pymaging'. + '(#:tests? #f)) + (propagated-inputs + `(("python-lxml" ,python-lxml) ; for SVG output + ("python-pillow" ,python-pillow) ; for PNG output + ("python-six" ,python-six))) + (home-page "https://github.com/lincolnloop/python-qrcode") + (synopsis "QR Code image generator") + (description "This package provides a pure Python QR Code generator +module. It uses the Python Imaging Library (PIL) to allow for the generation +of QR Codes. + +In addition this package provides a command line tool to generate QR codes and +either write these QR codes to a file or do the output as ascii art at the +console.") + (license license:bsd-3))) + +(define-public python2-qrcode + (package-with-python2 python-qrcode)) + +(define-public python-rst2ansi + (package + (name "python-rst2ansi") + (version "0.1.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rst2ansi" version)) + (sha256 + (base32 + "0vzy6gd60l79ff750scl0sz48r1laalkl6md6dwzah4dcadgn5qv")))) + (build-system python-build-system) + (propagated-inputs + `(("python-docutils" ,python-docutils))) + (home-page "https://github.com/Snaipe/python-rst-to-ansi") + (synopsis "Convert RST to ANSI-decorated console output") + (description + "Python module dedicated to rendering RST (reStructuredText) documents +to ansi-escaped strings suitable for display in a terminal.") + (license license:expat))) + +(define-public python-ansi2html + (package + (name "python-ansi2html") + (version "1.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ansi2html" version)) + (sha256 + (base32 + "1wa00zffprb78w1mqq90dk47czz1knanys2a40zbw2vyapd5lp9y")))) + (build-system python-build-system) + (native-inputs + `(("python-mock" ,python-mock) + ("python-nose" ,python-nose))) + (propagated-inputs + `(("python-six" ,python-six))) + (home-page "https://github.com/ralphbean/ansi2html") + (synopsis "Convert ANSI-decorated console output to HTML") + (description + "@command{ansi2html} is a Python library and command line utility for +convering text with ANSI color codes to HTML or LaTeX.") + (license license:gpl3+))) + +(define-public python2-ansi2html + (package-with-python2 python-ansi2html)) + +(define-public python-ddt + (package + (name "python-ddt") + (version "1.1.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ddt" version)) + (sha256 + (base32 + "1lw17420iimhghkgzgax85nn8d1an2d6k2cfvb7j5kwn2dqlr1vk")))) + (build-system python-build-system) + (native-inputs + `(("python-mock" ,python-mock) + ("python-nose" ,python-nose))) + (propagated-inputs + `(("python-six" ,python-six) + ("python-pyyaml" ,python-pyyaml))) + (home-page "https://github.com/txels/ddt") + (synopsis "Data-Driven Tests") + (description + "Data-Driven Tests (@dfn{DDT}) allow you to multiply one test case by +running it with different test data, and make it appear as multiple test +cases.") + (license license:expat))) + +(define-public python2-ddt + (package-with-python2 python-ddt)) + +(define-public python-pycountry + (package + (name "python-pycountry") + (version "18.5.26") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pycountry" version)) + (sha256 + (base32 + "15q9j047s3yc9cfcxq1ch8b71f81na44cr6dydd5gxk0ki9a4akz")))) + (build-system python-build-system) + (home-page "https://bitbucket.org/flyingcircus/pycountry") + (synopsis "ISO databases for languages, countries, currencies, etc.") + (description + "@code{pycountry} provides the ISO databases for the standards: +@enumerate +@item 639-3 (Languages) +@item 3166 (Countries) +@item 3166-3 (Deleted Countries) +@item 3166-2 (Subdivisions of countries) +@item 4217 (Currencies) +@item 15924 (Scripts) +@end enumerate +It includes a copy from Debian’s pkg-isocodes and makes the data accessible +through a Python API.") + (license license:lgpl2.1+))) + +(define-public python2-pycountry + (package-with-python2 python-pycountry)) + +(define-public python-pycosat + (package + (name "python-pycosat") + (version "0.6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pycosat" version)) + (sha256 + (base32 + "1kl3wh1f47rc712n4bmwplbx3fqz3x9i1b587jrbpmvdva4c8f6l")))) + ;; TODO: Unundle picosat. http://fmv.jku.at/picosat/ + (build-system python-build-system) + (home-page "https://github.com/ContinuumIO/pycosat") + (synopsis "Bindings to picosat (a SAT solver)") + (description + "This package provides efficient Python bindings to @code{picosat} on +the C level. When importing pycosat, the @code{picosat} solver becomes part +of the Python process itself. @code{picosat} is a @dfn{Boolean Satisfiability +Problem} (SAT) solver.") + (license license:expat))) + +(define-public python2-pycosat + (package-with-python2 python-pycosat)) + +(define-public python2-ruamel.ordereddict + (package + (name "python2-ruamel.ordereddict") + (version "0.4.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ruamel.ordereddict" version)) + (sha256 + (base32 + "1xmkl8v9l9inm2pyxgc1fm5005yxm7fkd5gv74q7lj1iy5qc8n3h")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (invoke "python" "test/testordereddict.py")))))) + (home-page "https://bitbucket.org/ruamel/ordereddict") + (synopsis "Version of dict that keeps keys in insertion order") + (description + "This is an implementation of an ordered dictionary with @dfn{Key +Insertion Order} (KIO: updates of values do not affect the position of the +key), @dfn{Key Value Insertion Order} (KVIO, an existing key's position is +removed and put at the back). The standard library module @code{OrderedDict}, +implemented later, implements a subset of @code{ordereddict} functionality. +Sorted dictionaries are also provided. Currently only with @dfn{Key Sorted +Order} (KSO, no sorting function can be specified, but a transform can be +specified to apply on the key before comparison (e.g. @code{string.lower})).") + (license license:expat))) + +(define-public python-pypeg2 + (package + (name "python-pypeg2") + (version "2.15.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyPEG2" version)) + (sha256 + (base32 + "0v8ziaam2r637v94ra4dbjw6jzxz99gs5x4i585kgag1v204yb9b")))) + (build-system python-build-system) + (propagated-inputs `(("python-lxml" ,python-lxml))) + (arguments + ;;https://bitbucket.org/fdik/pypeg/issues/36/test-failures-on-py35 + '(#:tests? #f)) + (home-page "https://fdik.org/pyPEG/") + (synopsis "Parsering Expression Grammars in Python") + (description "PyPEG is an intrinsic parser interpreter framework for +Python. It is based on Parsing Expression Grammars, PEG. With pyPEG you can +parse many formal languages.") + (license license:gpl2))) + +(define-public python-incremental + (package + (name "python-incremental") + (version "17.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "incremental" version)) + (sha256 + (base32 + "1cylxdz1cnkm5g3pklna3h2n0i0rks95ir1pnpxfnvpkmab1cxbv")))) + (build-system python-build-system) + (home-page "https://github.com/hawkowl/incremental") + (synopsis "Library for versioning Python projects") + (description "Incremental is a small library that versions your Python +projects.") + (license license:expat))) + +(define-public python2-incremental + (package-with-python2 python-incremental)) + +(define-public python-invoke + (package + (name "python-invoke") + (home-page "https://www.pyinvoke.org/") + (version "1.3.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "invoke" version)) + (sha256 + (base32 + "1nn7gad0rvy492acpyhkrp01zsk86acf34qhsvq4xmm6x39788n5")))) + (build-system python-build-system) + (arguments + ;; XXX: Requires many dependencies that are not yet in Guix. + `(#:tests? #f)) + (synopsis "Pythonic task execution") + (description + "Invoke is a Python task execution tool and library, drawing inspiration +from various sources to arrive at a powerful and clean feature set. It is +evolved from the Fabric project, but focuses on local and abstract concerns +instead of servers and network commands.") + (license license:bsd-3))) + +(define-public python2-invoke + (package-with-python2 python-invoke)) + +(define-public python-automat + (package + (name "python-automat") + (version "20.2.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "Automat" version)) + (sha256 + (base32 + "0cyzrcqiibwdsp4y0djkllnzab8m5faa4s0d1kpi23k1fhy80ybr")))) + (build-system python-build-system) + ;; We disable the tests because they require python-twisted, while + ;; python-twisted depends on python-automat. Twisted is optional, but the + ;; tests fail if it is not available. Also see + ;; . + (arguments '(#:tests? #f)) + (native-inputs + `(("python-m2r" ,python-m2r) + ("python-setuptools-scm" ,python-setuptools-scm) + ("python-graphviz" ,python-graphviz))) + (propagated-inputs + `(("python-six" ,python-six) + ("python-attrs" ,python-attrs))) + (home-page "https://github.com/glyph/Automat") + (synopsis "Self-service finite-state machines") + (description "Automat is a library for concise, idiomatic Python +expression of finite-state automata (particularly deterministic finite-state +transducers).") + (license license:expat))) + +(define-public python2-automat + (package-with-python2 python-automat)) + +(define-public python-m2r + (package + (name "python-m2r") + (version "0.2.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "m2r" version)) + (sha256 + (base32 + "16gdm8i06jjmlpvckpfmlkr4693dh0vs192vgsqn84fsdkbbm45z")))) + (build-system python-build-system) + (propagated-inputs + `(("python-docutils" ,python-docutils) + ("python-mistune" ,python-mistune))) + (native-inputs + `(("python-pygments" ,python-pygments) + ("python-mock" ,python-mock))) + (home-page "https://github.com/miyakogi/m2r") + (synopsis "Markdown to reStructuredText converter") + (description "M2R converts a markdown file including reST markups to valid +reST format.") + (license license:expat))) + +(define-public python2-m2r + (package-with-python2 python-m2r)) + +(define-public python-constantly + (package + (name "python-constantly") + (version "15.1.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "constantly" version)) + (sha256 + (base32 + "0dgwdla5kfpqz83hfril716inm41hgn9skxskvi77605jbmp4qsq")))) + (build-system python-build-system) + (home-page "https://github.com/twisted/constantly") + (synopsis "Symbolic constants in Python") + (description "Constantly is a Python library that provides symbolic +constant support. It includes collections and constants with text, numeric, +and bit flag values.") + (license license:expat))) + +(define-public python2-constantly + (package-with-python2 python-constantly)) + +(define-public python-attrs + (package + (name "python-attrs") + (version "19.3.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "attrs" version)) + (sha256 + (base32 + "0wky4h28n7xnr6xv69p9z6kv8bzn50d10c3drmd9ds8gawbcxdzp")))) + (build-system python-build-system) + (arguments + `(#:modules ((guix build utils) + (guix build python-build-system) + (ice-9 ftw) + (srfi srfi-1) + (srfi srfi-26)) + #:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (let ((cwd (getcwd))) + (setenv "PYTHONPATH" + (string-append + cwd "/build/" + (find (cut string-prefix? "lib" <>) + (scandir (string-append cwd "/build"))) + ":" + (getenv "PYTHONPATH"))) + (invoke "python" "-m" "pytest"))))))) + (native-inputs + `(("python-coverage" ,python-coverage) + ("python-hypothesis" ,python-hypothesis) + ("python-pympler" ,python-pympler) + ("python-pytest" ,python-pytest) + ("python-six" ,python-six) + ("python-sphinx" ,python-sphinx) + ("python-zope-interface" ,python-zope-interface))) + (home-page "https://github.com/python-attrs/attrs/") + (synopsis "Attributes without boilerplate") + (description "@code{attrs} is a Python package with class decorators that +ease the chores of implementing the most common attribute-related object +protocols.") + (license license:expat))) + +(define-public python2-attrs + (package-with-python2 python-attrs)) + +(define-public python-attrs-bootstrap + (package + (inherit python-attrs) + (name "python-attrs-bootstrap") + (native-inputs `()) + (arguments `(#:tests? #f)))) + +(define-public python2-attrs-bootstrap + (package-with-python2 python-attrs-bootstrap)) + +(define-public python2-cliapp + (package + (name "python2-cliapp") + (version "1.20180812.1") + (source + (origin + (method url-fetch) + (uri (string-append + "http://git.liw.fi/cgi-bin/cgit/cgit.cgi/cliapp/snapshot/cliapp-" + version ".tar.gz")) + (sha256 + (base32 + "1c1jlblbns8qhiaqjpg4xi6lip8xwfc5w643p43rg543havaj45x")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + ;; check phase needs to be run before the build phase. If not, + ;; coverage-test-runner looks for tests for the built source files, + ;; and fails. + (delete 'check) + (add-before 'build 'check + (lambda _ + ;; Disable python3 tests + (substitute* "check" + (("python3") "# python3")) + (invoke "./check")))))) + (native-inputs + `(("python2-coverage-test-runner" ,python2-coverage-test-runner) + ("python2-pep8" ,python2-pep8))) + (propagated-inputs + `(("python2-pyaml" ,python2-pyaml))) + (home-page "https://liw.fi/cliapp/") + (synopsis "Python framework for command line programs") + (description "@code{python2-cliapp} is a python framework for +command line programs. It contains the typical stuff such programs +need to do, such as parsing the command line for options, and +iterating over input files.") + (license license:gpl2+))) + +(define-public python2-ttystatus + (package + (name "python2-ttystatus") + (version "0.38") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "http://git.liw.fi/ttystatus") + ;; There are no tags after ttystatus-0.36. + (commit "e9fc573326c5d1348f5fe56263b4f7a8c32f58c9"))) + (sha256 + (base32 "0v49q839nrwdm19c83wfmj6n2kw80xslwq9k0n5509r2h7wzjiqj")) + (file-name (git-file-name name version)))) + (build-system python-build-system) + (native-inputs + `(("python2-coverage-test-runner" ,python2-coverage-test-runner) + ("python2-pep8" ,python2-pep8))) + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + ;; check phase needs to be run before the build phase. If not, + ;; coverage-test-runner looks for tests for the built source files, + ;; and fails. + (delete 'check) + (add-before 'build 'check + (lambda _ (invoke "make" "check")))))) + (home-page "https://liw.fi/ttystatus/") + (synopsis "Python library for showing progress reporting and +status updates on terminals") + (description "@code{python2-ttystatus} is a python library for +showing progress reporting and status updates on terminals, for +command line programs. Output is automatically adapted to the width +of the terminal: truncated if it does not fit, and resized if the +terminal size changes.") + (license license:gpl3+))) + +(define-public python2-tracing + (package + (name "python2-tracing") + (version "0.10") + (source + (origin + (method url-fetch) + (uri (string-append + "http://git.liw.fi/cgi-bin/cgit/cgit.cgi/python-tracing/snapshot/tracing-" + version ".tar.gz")) + (sha256 + (base32 + "06cw4zg42fsvqy372vi2whj26w56vzg5axhzwdjc2bgwf03garbw")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (home-page "https://liw.fi/tracing/") + (synopsis "Python debug logging helper") + (description "@code{python2-tracing} is a python library for +logging debug messages. It provides a way to turn debugging messages +on and off, based on the filename they occur in. It is much faster +than using @code{logging.Filter} to accomplish the same thing, which +matters when code is run in production mode. The actual logging still +happens using the @code{logging} library.") + (license license:gpl3+))) + +(define-public python2-larch + (package + (name "python2-larch") + (version "1.20151025") + (source + (origin + (method url-fetch) + (uri (string-append + "http://git.liw.fi/cgi-bin/cgit/cgit.cgi/larch/snapshot/larch-" + version ".tar.gz")) + (patches (search-patches + "python2-larch-coverage-4.0a6-compatibility.patch")) + (sha256 + (base32 + "1p4knkkavlqymgciz2wbcnfrdgdbafhg14maplnk4vbw0q8xs663")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + ;; check phase needs to be run before the build phase. If not, + ;; coverage-test-runner looks for tests for the built source files, + ;; and fails. + (delete 'check) + (add-before 'build 'check + (lambda _ (invoke "make" "check")))))) + (native-inputs + `(("cmdtest" ,cmdtest) + ("python2-coverage-test-runner" ,python2-coverage-test-runner))) + (propagated-inputs + `(("python2-tracing" ,python2-tracing))) + (home-page "https://liw.fi/larch/") + (synopsis "Python copy-on-write B-tree library") + (description "@code{python2-larch} is an implementation of +particular kind of B-tree, based on research by Ohad Rodeh. See +@url{http://liw.fi/larch/ohad-btrees-shadowing-clones.pdf} for details +on the data structure. + +The distinctive feature of this B-tree is that a node is never +(conceptually) modified. Instead, all updates are done by +copy-on-write. This makes it easy to clone a tree, and modify only the +clone, while other processes access the original tree.") + (license license:gpl3+))) + +(define-public python-astroid + (package + (name "python-astroid") + (version "2.4.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "astroid" version)) + (sha256 + (base32 "1h99jal7ax07xna1djw5z7hpgb8vjrl3hrrg49p1phljwniww5sc")))) + (build-system python-build-system) + (propagated-inputs + `(("python-lazy-object-proxy" ,python-lazy-object-proxy) + ("python-six" ,python-six) + ("python-wrapt" ,python-wrapt))) + (native-inputs + `(("python-dateutil" ,python-dateutil) + ("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner))) + (home-page "https://github.com/PyCQA/astroid") + (synopsis "Common base representation of python source code for pylint and +other projects") + (description "@code{python-astroid} provides a common base representation +of python source code for projects such as pychecker, pyreverse, pylint, etc. + +It provides a compatible representation which comes from the _ast module. It +rebuilds the tree generated by the builtin _ast module by recursively walking +down the AST and building an extended ast. The new node classes have +additional methods and attributes for different usages. They include some +support for static inference and local name scopes. Furthermore, astroid +builds partial trees by inspecting living objects.") + (license license:lgpl2.1+) + (properties `((python2-variant . ,(delay python2-astroid)))))) + +(define-public python2-astroid + (let ((base (package-with-python2 + (strip-python2-variant python-astroid)))) + (package (inherit base) + ;; Version 2.x removes python2 support. + (version "1.6.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "astroid" version)) + (sha256 + (base32 + "0fir4b67sm7shcacah9n61pvq313m523jb4q80sycrh3p8nmi6zw")))) + (arguments + (substitute-keyword-arguments (package-arguments base) + ((#:phases phases) + `(modify-phases ,phases + (add-after 'unpack 'remove-spurious-test + (lambda _ + ;; https://github.com/PyCQA/astroid/issues/276 + (delete-file "astroid/tests/unittest_brain.py") + #t)) + (replace 'check + (lambda _ + (invoke"python" "-m" "unittest" "discover" + "-p" "unittest*.py"))))))) + (native-inputs `()) + (propagated-inputs + `(("python2-backports-functools-lru-cache" + ,python2-backports-functools-lru-cache) + ("python2-enum34" ,python2-enum34) + ("python2-singledispatch" ,python2-singledispatch) + ,@(alist-delete "python-typed-ast" + (package-propagated-inputs base))))))) + +(define-public python-isbnlib + (package + (name "python-isbnlib") + (version "3.10.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "isbnlib" version)) + (sha256 + (base32 + "07qhykv0x60d5rsx5pj6s4q15ri4znczscll3xmpf6gyclac1592")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; No test + (home-page "https://github.com/xlcnd/isbnlib") + (synopsis "Python library to work with ISBN strings") + (description "@code{python-isbnlib} is a (pure) python library that provides +several useful methods and functions to validate, clean, transform, hyphenate and +get metadata for ISBN strings. Its origin was as the core of isbntools. This short +version, is suitable to be include as a dependency in other projects.") + (license license:lgpl3+))) + +(define-public python-isort + (package + (name "python-isort") + (version "4.3.4") + (source + (origin + (method git-fetch) + (uri (git-reference + ;; Tests pass only from the Github sources + (url "https://github.com/timothycrosley/isort") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1q0mlrpki5vjbgwxag5rghljjcfg7mvb0pbkwid80p0sqrxlm2p6")))) + (build-system python-build-system) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest))) + (home-page "https://github.com/timothycrosley/isort") + (synopsis "Python utility/library to sort python imports") + (description "@code{python-isort} is a python utility/library to sort +imports alphabetically, and automatically separated into sections. It +provides a command line utility, a python library and plugins for various +editors.") + (license license:expat) + (properties `((python2-variant . ,(delay python2-isort)))))) + +(define-public python2-isort + (let ((base (package-with-python2 + (strip-python2-variant python-isort)))) + (package (inherit base) + (native-inputs + `(("python2-futures" ,python2-futures) + ,@(package-native-inputs base)))))) + +(define-public python2-backports-functools-lru-cache + (package + (name "python2-backports-functools-lru-cache") + (version "1.6.1") + (source + (origin + (method url-fetch) + ;; only the pypi tarballs contain the necessary metadata + (uri (pypi-uri "backports.functools_lru_cache" version)) + (sha256 + (base32 + "0jidrkk2w6bhjm197plxiaxrav64mgcrign0bfyr7md2ilc5zplg")))) + (build-system python-build-system) + (native-inputs + `(("python2-setuptools-scm" ,python2-setuptools-scm))) + (arguments + `(#:python ,python-2)) + (home-page "https://github.com/jaraco/backports.functools_lru_cache") + (synopsis "Backport of functools.lru_cache from Python 3.3") + (description "@code{python2-backports-functools-lru-cache} is a backport +of @code{functools.lru_cache} from python 3.3.") + (license license:expat))) + +(define-public python-configparser + (package + (name "python-configparser") + (version "4.0.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "configparser" version)) + (sha256 + (base32 + "1priacxym85yjcf68hh38w55nqswaxp71ryjyfdk222kg9l85ln7")))) + (native-inputs + `(("python-setuptools_scm" ,python-setuptools-scm))) + (build-system python-build-system) + (home-page "https://github.com/jaraco/configparser/") + (synopsis "Backport of configparser from python 3.5") + (description "@code{python-configparser} is a backport of +@code{configparser} from Python 3.5 so that it can be used directly +in other versions.") + (license license:expat))) + +(define-public python2-configparser + (package-with-python2 python-configparser)) + +(define-public python-mamba + (package + (name "python-mamba") + (version "0.11.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "mamba" version)) + (sha256 + (base32 + "1jxy3bva94ac02a0wjsms79rp5104zmalxh8rhqqg6mw95cp6xpr")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) ; No test + (propagated-inputs + `(("python-clint" ,python-clint) + ("python-coverage" ,python-coverage))) + (home-page "https://nestorsalceda.com/mamba/") + (synopsis "Test runner for Python") + (description + "Mamba is a Behaviour-Driven Development tool for Python developers. +Is heavily influenced from RSpec, Mocha, Jasmine or Ginkgo.") + (license license:expat))) + +(define-public python-mando + (package + (name "python-mando") + (version "0.6.4") + (source (origin + (method url-fetch) + (uri (pypi-uri "mando" version)) + (sha256 + (base32 + "0q6rl085q1hw1wic52pqfndr0x3nirbxnhqj9akdm5zhq2fv3zkr")))) + (build-system python-build-system) + (propagated-inputs + `(("python-rst2ansi" ,python-rst2ansi) + ("python-six" ,python-six))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://mando.readthedocs.org/") + (synopsis + "Wrapper around argparse, allowing creation of complete CLI applications") + (description + "This package is a wrapper around argparse, allowing you to write complete CLI +applications in seconds while maintaining all the flexibility.") + (license license:expat))) + +(define-public python2-mando + (package-with-python2 python-mando)) + +(define-public python2-argparse + (package + (name "python2-argparse") + (version "1.4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "argparse" version)) + (sha256 + (base32 + "1r6nznp64j68ih1k537wms7h57nvppq0szmwsaf99n71bfjqkc32")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (home-page "https://github.com/ThomasWaldmann/argparse/") + (synopsis "Python command-line parsing library") + (description + "This package is mostly for people who want to have @code{argparse} on +older Pythons because it was not part of the standard library back then.") + (license license:psfl))) + +(define-public python-fudge + (package + (name "python-fudge") + ;; 0.9.6 is the latest version suitable for testing the "fabric" Python 2 + ;; package, which is currently the only use of this package. + (version "0.9.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "fudge" version)) + (sha256 + (base32 + "185ia3vr3qk4f2s1a9hdxb8ci4qc0x0xidrad96pywg8j930qs9l")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ;XXX: Tests require the NoseJS Python package. + (home-page "https://github.com/fudge-py/fudge") + (synopsis "Replace real objects with fakes/mocks/stubs while testing") + (description + "Fudge is a Python module for using fake objects (mocks and stubs) to +test real ones. + +In readable Python code, you declare the methods available on your fake object +and how they should be called. Then you inject that into your application and +start testing. This declarative approach means you don’t have to record and +playback actions and you don’t have to inspect your fakes after running code. +If the fake object was used incorrectly then you’ll see an informative +exception message with a traceback that points to the culprit.") + (license license:expat))) + +(define-public python2-fudge + (package-with-python2 python-fudge)) + +(define-public python-mwclient + (package + (name "python-mwclient") + (version "0.10.1") + (source + (origin + (method git-fetch) + ;; The PyPI version wouldn't contain tests. + (uri (git-reference + (url "https://github.com/mwclient/mwclient") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "120snnsh9n5svfwkyj1w9jrxf99jnqm0jk282yypd3lpyca1l9hj")))) + (build-system python-build-system) + (propagated-inputs + `(("python-requests-oauthlib" ,python-requests-oauthlib) + ("python-six" ,python-six))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-runner" ,python-pytest-runner) + ("python-responses" ,python-responses))) + (home-page "https://github.com/btongminh/mwclient") + (synopsis "MediaWiki API client") + (description "This package provides a MediaWiki API client.") + (license license:expat))) + +(define-public python2-mwclient + (package-with-python2 python-mwclient)) + +(define-public python-utils + (package + (name "python-utils") + (version "2.4.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "python-utils" version)) + (sha256 + (base32 + "12c0glzkm81ljgf6pwh0d4rmdm1r7vvgg3ifzp8yp9cfyngw07zj")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (delete-file "pytest.ini") + (invoke "pytest" "-vv")))))) + (native-inputs + `(("pytest-runner" ,python-pytest-runner) + ("pytest" ,python-pytest) + ("six" ,python-six))) + (home-page "https://github.com/WoLpH/python-utils") + (synopsis "Convenient utilities not included with the standard Python install") + (description + "Python Utils is a collection of small Python functions and classes which +make common patterns shorter and easier.") + (license license:bsd-2))) + +(define-public python2-utils + (package-with-python2 python-utils)) + +(define-public python-diff-match-patch + (package + (name "python-diff-match-patch") + (version "20121119") + (source + (origin + (method url-fetch) + (uri (pypi-uri "diff-match-patch" version)) + (sha256 + (base32 + "0k1f3v8nbidcmmrk65m7h8v41jqi37653za9fcs96y7jzc8mdflx")))) + (build-system python-build-system) + (home-page "https://code.google.com/p/google-diff-match-patch") + (synopsis "Synchronize plain text") + (description "Diff Match and Patch libraries offer robust algorithms to +perform the operations required for synchronizing plain text.") + (license license:asl2.0))) + +(define-public python2-diff-match-patch + (package-with-python2 python-diff-match-patch)) + +(define-public python-dirsync + (package + (name "python-dirsync") + (version "2.2.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "dirsync" version)) + (sha256 + (base32 + "1r40fkanksagcszf1ag85mdr8w7rgc7196n6s1qlsk2abw6i7v0z")))) + (build-system python-build-system) + (propagated-inputs + `(("six" ,python-six))) + (home-page "https://bitbucket.org/tkhyn/dirsync") + (synopsis "Advanced directory tree synchronisation tool") + (description "Advanced directory tree synchronisation tool.") + (license license:expat))) + +(define-public python2-dirsync + (package-with-python2 python-dirsync)) + +(define-public python-levenshtein + (package + (name "python-levenshtein") + (version "0.12.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-Levenshtein" version)) + (sha256 + (base32 + "1c9ybqcja31nghfcc8xxbbz9h60s9qi12b9hr4jyl69xbvg12fh3")))) + (build-system python-build-system) + (home-page "https://github.com/ztane/python-Levenshtein") + (synopsis "Fast computation of Levenshtein distance and string similarity") + (description + "The Levenshtein Python C extension module contains functions for fast computation of +@enumerate +@item Levenshtein (edit) distance, and edit operations +@item string similarity +@item approximate median strings, and generally string averaging +@item string sequence and set similarity +@end enumerate +It supports both normal and Unicode strings.") + (license license:gpl2+))) + +(define-public python2-levenshtein + (package-with-python2 python-levenshtein)) + +(define-public python-scandir + (package + (name "python-scandir") + (version "1.10.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "scandir" version)) + (sha256 + (base32 "1bkqwmf056pkchf05ywbnf659wqlp6lljcdb0y88wr9f0vv32ijd")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "python" "test/run_tests.py")))))) + (home-page "https://github.com/benhoyt/scandir") + (synopsis "Directory iteration function") + (description + "Directory iteration function like os.listdir(), except that instead of +returning a list of bare filenames, it yields DirEntry objects that include +file type and stat information along with the name. Using scandir() increases +the speed of os.walk() by 2-20 times (depending on the platform and file +system) by avoiding unnecessary calls to os.stat() in most cases. + +This package is part of the Python standard library since version 3.5.") + (license license:bsd-3))) + +(define-public python2-scandir + (package-with-python2 python-scandir)) + +(define-public python2-stemming + (package + (name "python2-stemming") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "stemming" version)) + (sha256 + (base32 "0ldwa24gnnxhniv0fhygkpc2mwgd93q10ag8rvzayv6hw418frsr")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (home-page "https://bitbucket.org/mchaput/stemming/overview") + (synopsis "Python implementations of various stemming algorithms") + (description + "Python implementations of the Porter, Porter2, Paice-Husk, and Lovins +stemming algorithms for English. These implementations are straightforward and +efficient, unlike some Python versions of the same algorithms available on the +Web. This package is an extraction of the stemming code included in the Whoosh +search engine.") + (license license:public-domain))) + +(define-public python-factory-boy + (package + (name "python-factory-boy") + (version "2.8.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "factory_boy" version)) + (sha256 + (base32 "1fvin6san5xsjh2c4y18caj2lnmwxlylyqm8mh1yc6rp38wlwr56")))) + (build-system python-build-system) + (arguments + ;; Tests are not included in the tarball. + `(#:tests? #f)) + (propagated-inputs + `(("faker" ,python-faker))) + (home-page "https://github.com/benhoyt/scandir") + (synopsis "Versatile test fixtures replacement") + (description + "Factory_boy is a fixtures replacement based on thoughtbot’s factory_girl. + +As a fixtures replacement tool, it aims to replace static, hard to maintain +fixtures with easy-to-use factories for complex object. + +Instead of building an exhaustive test setup with every possible combination +of corner cases, factory_boy allows you to use objects customized for the +current test, while only declaring the test-specific fields") + (license license:expat))) + +(define-public python2-factory-boy + (package-with-python2 python-factory-boy)) + +(define-public python-translate-toolkit + (package + (name "python-translate-toolkit") + (version "2.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "translate-toolkit" version ".tar.bz2")) + (sha256 + (base32 "1vlkwrg83vb17jc36pmwh2b7jphwf390lz0jw8hakcg16qhwypvq")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-sphinx" ,python-sphinx))) + (propagated-inputs + `(("python-babel" ,python-babel) + ("python-beautifulsoup4" ,python-beautifulsoup4) + ("python-chardet" ,python-chardet) + ("python-diff-match-patch" ,python-diff-match-patch) + ("python-levenshtein" ,python-levenshtein) + ("python-lxml" ,python-lxml) + ("python-six" ,python-six) + ("python-vobject" ,python-vobject) + ("python-pyyaml" ,python-pyyaml))) + (arguments + ;; TODO: tests are not run, because they end with + ;; TypeError: parse() missing 2 required positional arguments: 'tree' and + ;; 'parse_funcs' + ;; during test setup. + `(#:tests? #f)) + (home-page "https://toolkit.translatehouse.org") + (synopsis "Tools and API for translation and localization engineering") + (description + "Tools and API for translation and localization engineering. It contains +several utilities, as well as an API for building localization tools.") + (license license:gpl2+))) + +(define-public python2-translate-toolkit + (package-with-python2 python-translate-toolkit)) + +(define-public python-packaging + (package + (name "python-packaging") + (version "20.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "packaging" version)) + ;; XXX: The URL in the patch file is wrong, it should be + ;; . + (patches (search-patches "python-packaging-test-arch.patch")) + (sha256 + (base32 + "1y2ip3a4ykkpgnwgn85j6hkspcl0cg3mzms97f40mk57vwqq67gy")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (if tests? + (invoke "py.test" "-vv") + (format #t "test suite not run~%")) + #t))))) + (native-inputs + `(("python-pretend" ,python-pretend) + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-pyparsing" ,python-pyparsing) + ("python-six" ,python-six))) + (home-page "https://github.com/pypa/packaging") + (synopsis "Core utilities for Python packages") + (description "Packaging is a Python module for dealing with Python packages. +It offers an interface for working with package versions, names, and dependency +information.") + ;; From 'LICENSE': This software is made available under the terms of + ;; *either* of the licenses found in LICENSE.APACHE or LICENSE.BSD. + ;; Contributions to this software is made under the terms of *both* these + ;; licenses. + (license (list license:asl2.0 license:bsd-2)))) + +(define-public python2-packaging + (package-with-python2 python-packaging)) + +;; Variants with minimal dependencies, for bootstrapping Pytest. +(define-public python-packaging-bootstrap + (hidden-package + (package/inherit + python-packaging + (name "python-packaging-bootstrap") + (native-inputs '()) + (propagated-inputs + `(("python-pyparsing" ,python-pyparsing))) + (arguments '(#:tests? #f))))) + +(define-public python2-packaging-bootstrap + (hidden-package + (package/inherit + python2-packaging + (name "python2-packaging-bootstrap") + (native-inputs '()) + (propagated-inputs + `(("python-pyparsing" ,python2-pyparsing))) + (arguments + `(#:tests? #f + ,@(package-arguments python2-packaging)))))) + +(define-public python-relatorio + (package + (name "python-relatorio") + (version "0.8.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "relatorio" version)) + (sha256 + (base32 + "1na6hlhz1awi1hbjg1gyclq0khz42iz90wvdjw7mmj655788bpxx")))) + (build-system python-build-system) + (propagated-inputs + `(("python-lxml" ,python-lxml) + ("python-genshi" ,python-genshi))) + (native-inputs + `(("python-magic" ,python-magic))) + (home-page "https://relatorio.tryton.org/") + (synopsis "Templating library able to output ODT and PDF files") + (description "Relatorio is a templating library which provides a way to +easily output ODT, ODS, PNG, SVG and several other kinds of files. Support +for more filetypes can be easily added by creating plugins for them.") + (license license:gpl3+))) + +(define-public python2-relatorio + (package-with-python2 python-relatorio)) + +(define-public python-radon + (package + (name "python-radon") + (version "4.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "radon" version)) + (sha256 + (base32 + "0vfxxzbnz5lxfvp0yxp35g6c8qqnnbhi4dm7shkm1d3d4192q22n")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "python" "radon/tests/run.py")))))) + (propagated-inputs + `(("python-colorama" ,python-colorama) + ("python-flake8-polyfill" ,python-flake8-polyfill) + ("python-mando" ,python-mando))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-pytest-mock" ,python-pytest-mock))) + (home-page "https://radon.readthedocs.org/") + (synopsis "Code Metrics in Python") + (description "Radon is a Python tool which computes various code metrics. +Supported metrics are: +@itemize @bullet +@item raw metrics: SLOC, comment lines, blank lines, &c. +@item Cyclomatic Complexity (i.e. McCabe’s Complexity) +@item Halstead metrics (all of them) +@item the Maintainability Index (a Visual Studio metric) +@end itemize") + (properties `((python2-variant . ,(delay python2-radon)))) + (license license:expat))) + +(define-public python2-radon + (let ((base (package-with-python2 (strip-python2-variant python-radon)))) + (package + (inherit base) + (propagated-inputs + `(("python-configparser" ,python2-configparser) + ("python-future" ,python2-future) + ,@(package-propagated-inputs base)))))) + +(define-public python-sure + (package + (name "python-sure") + (version "1.4.11") + (source + (origin + (method url-fetch) + (uri (pypi-uri "sure" version)) + (sha256 + (base32 + "1and0drq8w9iplsic22n2h7hkpyq03a1mbqk4sgcdqhqzdqm539w")))) + (build-system python-build-system) + (propagated-inputs + `(("python-mock" ,python-mock) + ("python-six" ,python-six))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/gabrielfalcao/sure") + (synopsis "Automated testing library in python for python") + (description + "Sure is a python library that leverages a DSL for writing assertions. +Sure is heavily inspired by @code{RSpec Expectations} and @code{should.js}.") + (license license:gpl3+))) + +(define-public python2-sure + (package-with-python2 python-sure)) + +(define-public python2-couleur + ;; This package does not seem to support python3 at all, hence, + ;; only the python2 variant definition is provided. + (package + (name "python2-couleur") + (version "0.6.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "couleur" version)) + (sha256 + (base32 + "1qqaxyqz74wvid0cr119dhcwz0h0if5b5by44zl49pd5z65v58k1")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (home-page "https://github.com/gabrielfalcao/couleur") + (synopsis + "ANSI terminal tool for python, colored shell and other handy fancy features") + (description + "@code{Couleur} provides python programs a way to use the ANSI features in a unix +terminal such as coloured output in the shell, overwriting output, indentation, etc.") + ;; README.md says ASL2.0, but all source code headers are LGPL3+. + ;; https://github.com/gabrielfalcao/couleur/issues/11 + (license license:lgpl3+))) + +(define-public python-misaka + (package + (name "python-misaka") + (version "2.1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "misaka" version)) + (sha256 + (base32 + "1mzc29wwyhyardclj1vg2xsfdibg2lzb7f1azjcxi580ama55wv2")))) + (build-system python-build-system) + (arguments + `(;; Line 37 of setup.py calls self.run_command('develop') + ;; in the 'check' phase. This command seems to be trying + ;; to write to + ;; /gnu/store/...-python-/lib/python/site-packages/ + ;; for which it does not have the permission to write. + #:tests? #f)) + (propagated-inputs + `(("python-cffi" ,python-cffi))) + (home-page "https://github.com/FSX/misaka") + (synopsis "Python binding for Hoedown") + (description + "@code{Misaka} is a CFFI-based binding for @code{Hoedown}, a fast markdown processing +library written in C. It features a fast HTML renderer and functionality to make custom +renderers (e.g. man pages or LaTeX).") + (license license:expat))) + +(define-public python2-misaka + (package-with-python2 python-misaka)) + +(define-public python2-steadymark + ;; This is forced into being a python2 only variant + ;; due to its dependence on couleur that has no support + ;; for python3 + (package + (name "python2-steadymark") + (version "0.7.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "steadymark" version)) + (sha256 + (base32 + "1640i9g8dycql3cc8j0bky0jkzj0q39blfbp4lsgpkprkfgcdk8v")))) + (build-system python-build-system) + (native-inputs + `(("python-couleur" ,python2-couleur) + ("python-sure" ,python2-sure) + ("python-misaka" ,python2-misaka))) + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + (add-before 'build 'patch-setup-py + (lambda _ + ;; Update requirements from dependency==version + ;; to dependency>=version + (substitute* "setup.py" + (("==") ">=")) + #t))))) + (home-page "https://github.com/gabrielfalcao/steadymark") + (synopsis "Markdown-based test runner for python") + (description + "@code{Steadymark} allows documentation to be written in github-flavoured +markdown. The documentation may contain snippets of code surrounded by python +code blocks and @code{Steadymark} will find these snippets and run them, making +sure that there are no old malfunctional examples in the documentation examples.") + (license license:expat))) + +(define-public python-jsonpointer + (package + (name "python-jsonpointer") + (version "1.10") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jsonpointer" version)) + (sha256 + (base32 + "1cg0gvgqjysydv6p45v4jywg1jb3v48c7m3cbpi57zgf6nndr9cz")))) + (build-system python-build-system) + (home-page "https://github.com/stefankoegl/python-json-pointer") + (synopsis "Identify specific nodes in a JSON document") + (description "@code{jsonpointer} allows you to access specific nodes +by path in a JSON document (see RFC 6901).") + (license license:bsd-3))) + +(define-public python2-jsonpointer + (package-with-python2 python-jsonpointer)) + +(define-public python-jsonpatch + (package + (name "python-jsonpatch") + (version "1.16") + (source + (origin + (method git-fetch) + ;; pypi version lacks tests.js + (uri (git-reference + (url "https://github.com/stefankoegl/python-json-patch") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0k9pff06lxama3nhsc7cdxbp83422bdy8ifs52i6xkas8hpyzfzr")))) + (build-system python-build-system) + (native-inputs + `(("python-jsonpointer" ,python-jsonpointer))) + (home-page "https://github.com/stefankoegl/python-json-patch") + (synopsis "Applying JSON Patches in Python 2.6+ and 3.x") + (description "@code{jsonpatch} is a library and program that allows +applying JSON Patches according to RFC 6902.") + (license license:bsd-3))) + +(define-public python2-jsonpatch + (package-with-python2 python-jsonpatch)) + +(define-public python-jsonpatch-0.4 + (package (inherit python-jsonpatch) + (name "python-jsonpatch") + (version "0.4") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/stefankoegl/python-json-patch") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1fq02y57kinyknxjcav0slcb0k9mwdffqw2hnlhdkpj7palh2mwk")))))) + +(define-public python2-jsonpatch-0.4 + (package-with-python2 python-jsonpatch-0.4)) + +(define-public python-rfc3986 + (package + (name "python-rfc3986") + (version "1.4.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "rfc3986" version)) + (sha256 + (base32 + "17dvx15m3r49bmif5zlli8kzjd6bys6psixzbp14sd5367d9h8qi")))) + (build-system python-build-system) + (arguments + `(#:modules ((guix build utils) + (guix build python-build-system) + (ice-9 ftw) + (srfi srfi-1) + (srfi srfi-26)) + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (let ((cwd (getcwd))) + (setenv "PYTHONPATH" + (string-append cwd "/build/" + (find (cut string-prefix? "lib" <>) + (scandir (string-append cwd "/build"))) + ":" + (getenv "PYTHONPATH"))) + (invoke "pytest" "-v"))))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://rfc3986.readthedocs.io/") + (synopsis "Parse and validate URI references") + (description + "@code{rfc3986} is a Python implementation of RFC@tie{}3986 including +validation and authority parsing. This module also supports RFC@tie{}6874 +which adds support for zone identifiers to IPv6 addresses.") + (license license:asl2.0))) + +(define-public python2-rfc3986 + (package-with-python2 python-rfc3986)) + +(define-public python-rfc3987 + (package + (name "python-rfc3987") + (version "1.3.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rfc3987" version)) + (sha256 + (base32 + "192pclzs2y0yaywqkrlvd0x73740q310kvqvm6jldhi619mq59wi")))) + (build-system python-build-system) + (home-page "https://pypi.org/project/rfc3987/") + (synopsis "Parsing and validation of URIs (RFC 3986) and IRIs (RFC 3987)") + (description "@code{rfc3987} provides routines for parsing and +validation of URIs (see RFC 3986) and IRIs (see RFC 3987).") + (license license:gpl3+))) + +(define-public python2-rfc3987 + (package-with-python2 python-rfc3987)) + +(define-public python-validators + (package + (name "python-validators") + (version "0.14.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "validators" version)) + (sha256 + (base32 + "024m15j33szd0v8k5l4ccish6n0b4knq81gmb4fq25ynwyyyd4mi")))) + (build-system python-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest" "-vv")))))) + (propagated-inputs + `(("python-decorator" ,python-decorator) + ("python-six" ,python-six))) + (native-inputs + `(("python-flake8" ,python-flake8) + ("python-isort" ,python-isort) + ("python-pytest" ,python-pytest))) + (home-page "https://github.com/kvesteri/validators") + (synopsis "Data validation library") + (description + "This package contains validators for different things such as email +addresses, IP addresses, URLs, hashes and more. It has been designed to +be easy to use and not require defining a schema or form just to validate +some input.") + (license license:expat))) + +(define-public python2-validators + (package-with-python2 python-validators)) + +(define-public python-validate-email + (package + (name "python-validate-email") + (version "1.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "validate_email" version)) + (sha256 + (base32 + "1bxffaf5yz2cph8ki55vdvdypbwkvn2xr1firlcy62vqbzf1jivq")))) + (build-system python-build-system) + (home-page "https://github.com/syrusakbary/validate_email") + (synopsis "Verifies if an email address is valid and really exists") + (description "@code{validate_email} can be used to verify if an email +address is valid and really exists.") + (license license:lgpl3+))) + +(define-public python2-validate-email + (package-with-python2 python-validate-email)) + +(define-public python-flex + (package + (name "python-flex") + (version "6.10.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "flex" version)) + (sha256 + (base32 + "00pamnwla3khk8nyla7y28dq9jnh69swd7f4jfsl7sn1izs8n8zk")))) + (build-system python-build-system) + (propagated-inputs + `(("python-click" ,python-click) + ("python-iso8601" ,python-iso8601) + ("python-jsonpointer" ,python-jsonpointer) + ("python-pyyaml" ,python-pyyaml) + ("python-requests" ,python-requests) + ("python-rfc3987" ,python-rfc3987) + ("python-six" ,python-six) + ("python-validate-email" ,python-validate-email))) + (home-page "https://github.com/pipermerriam/flex") + (synopsis "Validates Swagger schemata") + (description "@code{flex} can be used to validate Swagger schemata.") + (license license:bsd-3))) + +(define-public python2-flex + (package-with-python2 python-flex)) + +(define-public python-marshmallow + (package + (name "python-marshmallow") + (version "3.0.0b14") + (source + (origin + (method url-fetch) + (uri (pypi-uri "marshmallow" version)) + (sha256 + (base32 + "1digk3f5cfk7wmlka65mc7bzsd96pbsgcsvp6pimd5b4ff9zb5p3")))) + (build-system python-build-system) + (propagated-inputs + `(("python-dateutil" ,python-dateutil) + ("python-simplejson" ,python-simplejson))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-pytz" ,python-pytz))) + (home-page "https://github.com/marshmallow-code/marshmallow") + (synopsis "Convert complex datatypes to and from native +Python datatypes.") + (description "@code{marshmallow} provides a library for converting +complex datatypes to and from native Python datatypes.") + (license license:expat))) + +(define-public python2-marshmallow + (package-with-python2 python-marshmallow)) + +(define-public python-apispec + (package + (name "python-apispec") + (version "0.25.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "apispec" version)) + (sha256 + (base32 + "0kxa8723zbisx10363yh4mmmn4higxrspymbjfz5zq8f644zagm9")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pyyaml" ,python-pyyaml))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-flask" ,python-flask) + ("python-marshmallow" ,python-marshmallow) + ("python-tornado" ,python-tornado) + ("python-bottle" ,python-bottle) + ("python-mock" ,python-mock))) + (home-page "https://github.com/marshmallow-code/apispec") + (synopsis "Swagger 2.0 API specification generator") + (description "@code{python-apispec} is a pluggable API specification +generator. Currently supports the OpenAPI specification (f.k.a. +Swagger 2.0).") + (license license:expat))) + +(define-public python2-apispec + (package-with-python2 python-apispec)) + +(define-public python-flasgger + (package + (name "python-flasgger") + (version "0.6.3") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/rochacbruno/flasgger") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0yydxsyjnc0clbrjqb1n7587l6cdqvwdagwxk5hkx01qwdfbkvpn")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (substitute* "Makefile" + (("flake8 flasgger --ignore=F403") + "flake8 flasgger --ignore=E731,F403")) + (setenv "PYTHONPATH" (string-append (getcwd) + ":" + (getenv "PYTHONPATH"))) + (invoke "py.test")))))) + (propagated-inputs + `(("python-flask" ,python-flask) + ("python-pyyaml" ,python-pyyaml) + ("python-jsonschema" ,python-jsonschema) + ("python-mistune" ,python-mistune) + ("python-six" ,python-six))) + (native-inputs + `(("python-decorator" ,python-decorator) + ("python-flake8" ,python-flake8) + ("python-flask-restful" ,python-flask-restful) + ("python-flex" ,python-flex) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-marshmallow" ,python-marshmallow) + ("python-apispec" ,python-apispec))) + (home-page "https://github.com/rochacbruno/flasgger/") + (synopsis "Extract Swagger specs from your Flask project") + (description "@code{python-flasgger} allows extracting Swagger specs +from your Flask project. It is a fork of Flask-Swagger.") + (license license:expat))) + +(define-public python2-flasgger + (package-with-python2 python-flasgger)) + +(define-public python-swagger-spec-validator + (package + (name "python-swagger-spec-validator") + (version "2.4.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "swagger-spec-validator" version)) + (sha256 + (base32 + "11g627icrsqwazsncwi0sdvprcj6hwaayw5xk3xsj8d97bmrzqjp")))) + (build-system python-build-system) + (propagated-inputs + `(("python-jsonschema" ,python-jsonschema) + ("python-pyyaml" ,python-pyyaml) + ("python-six" ,python-six))) + (home-page + "https://github.com/Yelp/swagger_spec_validator") + (synopsis "Validation of Swagger specifications") + (description "@code{swagger_spec_validator} provides a library for +validating Swagger API specifications.") + (license license:asl2.0))) + +(define-public python2-swagger-spec-validator + (package-with-python2 python-swagger-spec-validator)) + +(define-public python-apache-libcloud + (package + (name "python-apache-libcloud") + (version "2.4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "apache-libcloud" version)) + (sha256 + (base32 + "0daj3mkzw79v5zin2r1s2wkrz1hplfc16bwj4ss68i5qjq4l2p0j")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-ssh + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "libcloud/compute/ssh.py" + (("'ssh'") (string-append "'" (assoc-ref inputs "openssh") + "/bin/ssh" "'"))) + #t)) + (add-after 'unpack 'patch-tests + (lambda _ + (substitute* "./libcloud/test/test_file_fixtures.py" + ;; See . + (("def _ascii") "def _raw_data(self, method, url, body, headers): + return (httplib.OK, + \"1234abcd\", + {\"test\": \"value\"}, + httplib.responses[httplib.OK]) + def _ascii")) + (substitute* "libcloud/test/compute/test_ssh_client.py" + (("class ShellOutSSHClientTests") + "@unittest.skip(\"Guix container doesn't have ssh service\") +class ShellOutSSHClientTests") + ;; See . + (("'.xf0.x90.x8d.x88'") "b'\\xF0\\x90\\x8D\\x88'") + (("'.xF0', '.x90', '.x8D', '.x88'") + "b'\\xF0', b'\\x90', b'\\x8D', b'\\x88'")) + #t)) + (add-before 'check 'copy-secret + (lambda _ + (copy-file "libcloud/test/secrets.py-dist" + "libcloud/test/secrets.py") + #t))))) + (inputs + `(("openssh" ,openssh))) + (propagated-inputs + `(("python-paramiko" ,python-paramiko) + ("python-requests" ,python-requests))) + (native-inputs + `(("python-lockfile" ,python-lockfile) + ("python-mock" ,python-mock) + ("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner) + ("python-requests-mock" ,python-requests-mock))) + (home-page "https://libcloud.apache.org/") + (synopsis "Unified Cloud API") + (description "@code{libcloud} is a Python library for interacting with +many of the popular cloud service providers using a unified API.") + (license license:asl2.0))) + +(define-public python2-apache-libcloud + (package-with-python2 python-apache-libcloud)) + +(define-public python-smmap + (package + (name "python-smmap") + (version "3.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "smmap" version)) + (sha256 + (base32 "0ijlnv60y8f41py1wnn5n1a1i81cxd9dfpdhr0k3cgkrcbz8850p")))) + (build-system python-build-system) + (native-inputs + `(("python-nosexcover" ,python-nosexcover))) + (home-page "https://github.com/Byron/smmap") + (synopsis "Python sliding window memory map manager") + (description "@code{smmap} is a pure Python implementation of a sliding +window memory map manager.") + (license license:bsd-3))) + +(define-public python-smmap2 + (deprecated-package "python-smmap2" python-smmap)) + +(define-public python2-smmap + (package-with-python2 python-smmap)) + +(define-public python2-smmap2 + (deprecated-package "python2-smmap2" python2-smmap)) + +(define-public python-regex + (package + (name "python-regex") + (version "2020.6.8") + (source (origin + (method url-fetch) + (uri (pypi-uri "regex" version)) + (sha256 + (base32 + "1b3k0zi1pd99q5mk7ri7vcx2y1mq5inm9hk8dryqyhrpkmh4xdp9")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (invoke "python" "-c" + "from regex.test_regex import test_main; test_main()")))))) + (home-page "https://bitbucket.org/mrabarnett/mrab-regex") + (synopsis "Alternative regular expression module") + (description "This regular expression implementation is backwards- +compatible with the standard @code{re} module, but offers additional +functionality like full case-folding for case-insensitive matches in Unicode.") + (license license:psfl))) + +(define-public python2-regex + (package-with-python2 python-regex)) + +(define-public python-pyopengl + (package + (name "python-pyopengl") + (version "3.1.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "PyOpenGL" version)) + (sha256 + (base32 + "091lp9bpqi8yf1nmyg19xmvw611lrzq2q94cl1k5gnlh0c6vl1s1")))) + (build-system python-build-system) + (inputs + `(("mesa" ,mesa) + ("freeglut" ,freeglut) + ("glu" ,glu))) + (arguments + `(#:tests? #f ; Tests fail: AttributeError: 'GLXPlatform' object has no + ;attribute 'OSMesa' + #:phases + (modify-phases %standard-phases + (add-before 'build 'fix-paths + (lambda* (#:key inputs outputs #:allow-other-keys) + (substitute* '("OpenGL/platform/ctypesloader.py") + (("filenames_to_try = \\[\\]") "filenames_to_try = [name]")) + (substitute* '("OpenGL/platform/glx.py" "tests/check_glut_load.py") + (("'GL'") + (string-append "'" (assoc-ref inputs "mesa") "/lib/libGL.so'")) + (("'GLU'") + (string-append "'" (assoc-ref inputs "glu") "/lib/libGLU.so'")) + (("'glut',") + (string-append "'" (assoc-ref inputs "freeglut") "/lib/libglut.so',")) + (("'GLESv1_CM'") + (string-append "'" (assoc-ref inputs "mesa") "/lib/libGLESv1_CM.so'")) + (("'GLESv2'") + (string-append "'" (assoc-ref inputs "mesa") "/lib/libGLESv2.so'"))) + ;; Not providing libgle. It seems to be very old. + #t))))) + (home-page "http://pyopengl.sourceforge.net") + (synopsis "Standard OpenGL bindings for Python") + (description + "PyOpenGL is the most common cross platform Python binding to OpenGL and +related APIs. The binding is created using the standard @code{ctypes} +library.") + (license license:bsd-3))) + +(define-public python-pyopengl-accelerate + (package + (inherit python-pyopengl) + (name "python-pyopengl-accelerate") + (version "3.1.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "PyOpenGL-accelerate" version)) + (sha256 + (base32 + "01iggy5jwxv7lxnj51zbmlbhag9wcb7dvrbwgi97i90n0a5m3r8j")))) + (inputs + `(("mesa" ,mesa) + ("python-numpy" ,python-numpy))) ; for cython module + ; numpy_formathandler, thus not propagated + (arguments + `(#:tests? #f + #:phases + (modify-phases %standard-phases + (delete 'fix-paths)))) + (synopsis "Acceleration code for PyOpenGL") + (description + "This is the Cython-coded accelerator module for PyOpenGL."))) + +(define-public python-rencode + (package + (name "python-rencode") + (version "1.0.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rencode" version)) + (sha256 + (base32 + "0mzwdq1is7kyyr32i5k4iz6g5xxdvmiyc132jnc60p9m6lnwjrpv")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'delete-bogus-test + ;; This test requires /home/aresch/Downloads, which is not provided by + ;; the build environment. + (lambda _ + (delete-file "rencode/t.py") + #t))))) + (native-inputs `(("pkg-config" ,pkg-config) + ("python-cython" ,python-cython))) + (home-page "https://github.com/aresch/rencode") + (synopsis "Serialization of heterogeneous data structures") + (description + "The @code{rencode} module is a data structure serialization library, +similar to @code{bencode} from the BitTorrent project. For complex, +heterogeneous data structures with many small elements, r-encoding stake up +significantly less space than b-encodings. This version of rencode is a +complete rewrite in Cython to attempt to increase the performance over the +pure Python module.") + (license license:bsd-3))) + +(define-public python2-rencode + (package-with-python2 python-rencode)) + +(define-public python-xenon + (package + (name "python-xenon") + (version "0.7.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "xenon" version)) + (sha256 + (base32 + "0nv207ql2wmh9q62503np056c4vf1c1hlsi5cvv5p5kx574k6r2y")))) + (build-system python-build-system) + (native-inputs + `(("python-pyyaml" ,python-pyyaml) + ("python-radon" ,python-radon) + ("python-requests" ,python-requests) + ("python-flake8" ,python-flake8) + ("python-tox" ,python-tox))) + (arguments + `(#:tests? #f ;test suite not shipped with the PyPI archive + #:phases + (modify-phases %standard-phases + (add-before 'build 'patch-test-requirements + (lambda _ + ;; Remove httpretty dependency for tests. + (substitute* "setup.py" + (("httpretty") "")) + #t))))) + (home-page "https://xenon.readthedocs.org/") + (synopsis "Monitor code metrics for Python on your CI server") + (description + "Xenon is a monitoring tool based on Radon. It monitors code complexity. +Ideally, @code{xenon} is run every time code is committed. Through command +line options, various thresholds can be set for the complexity of code. It +will fail (i.e. it will exit with a non-zero exit code) when any of these +requirements is not met.") + (license license:expat))) + +(define-public python2-xenon + (package-with-python2 python-xenon)) + +(define-public python-pysocks + (package + (name "python-pysocks") + (version "1.7.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "PySocks" version)) + (sha256 + (base32 + "0z4p31bpqm893cf87qqgb30k7nwd8kqfjwwjm5cvxb6zbyj1w0yr")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) + (home-page "https://github.com/Anorov/PySocks") + (synopsis "SOCKS client module") + (description "@code{pysocks} is an updated and semi-actively maintained +version of @code{SocksiPy} with bug fixes and extra features.") + (license license:bsd-3))) + +(define-public python2-pysocks + (package-with-python2 python-pysocks)) + +(define-public python-pydiff + (package + (name "python-pydiff") + (version "0.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pydiff" version)) + (sha256 + (base32 + "1als83h9w0gab24ipyna6khm390qmpnpkc5jksmdbs2xc8hp2z44")))) + (build-system python-build-system) + (home-page "https://github.com/myint/pydiff") + (synopsis "Library to diff two Python files at the bytecode level") + (description + "@code{pydiff} makes it easy to look for actual code changes while +ignoring formatting changes.") + (license license:expat))) + +(define-public python2-pydiff + (package-with-python2 python-pydiff)) + +(define-public python-tqdm + (package + (name "python-tqdm") + (version "4.43.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "tqdm" version)) + (sha256 + (base32 + "093v4c2x5hpigv47zvyxl8wh10y2yd2gvz3l9vchn0zsp8hv2pzk")))) + (build-system python-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (replace 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + ;; This invokation is taken from tox.ini. + (invoke "nosetests" "--ignore-files=\"test_perf.py\"" + "-d" "-v" "tqdm/")))))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/tqdm/tqdm") + (synopsis "Fast, extensible progress meter") + (description + "Make loops show a progress bar on the console by just wrapping any +iterable with @code{|tqdm(iterable)|}. Offers many options to define +design and layout.") + (license (list license:mpl2.0 license:expat)))) + +(define-public python2-tqdm + (package-with-python2 python-tqdm)) + +(define-public python-pkginfo + (package + (name "python-pkginfo") + (version "1.4.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pkginfo" version)) + (sha256 + (base32 + "0x6lm17p1ks031mj6pajyp4rkq74vpqq8qwjb7ikgwmkli1day2q")))) + (build-system python-build-system) + (arguments + ;; The tests are broken upstream. + '(#:tests? #f)) + (home-page + "https://code.launchpad.net/~tseaver/pkginfo/trunk") + (synopsis + "Query metadatdata from sdists, bdists, and installed packages") + (description + "API to query the distutils metadata written in @file{PKG-INFO} inside a +source distriubtion (an sdist) or a binary distribution (e.g., created by +running bdist_egg). It can also query the EGG-INFO directory of an installed +distribution, and the *.egg-info stored in a \"development checkout\" (e.g, +created by running @code{python setup.py develop}).") + (license license:expat))) + +(define-public python2-pkginfo + (package-with-python2 python-pkginfo)) + +(define-public python-twine + (package + (name "python-twine") + (version "1.15.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "twine" version)) + (sha256 + (base32 "11rpd653zcgzkq3sgwkzs3mpxl3r5rij59745ni84ikv8smjmlm3")))) + (build-system python-build-system) + (propagated-inputs + `(("python-tqdm" ,python-tqdm) + ("python-packaging" ,python-packaging) + ("python-pkginfo" ,python-pkginfo) + ("python-readme-renderer" ,python-readme-renderer) + ("python-requests" ,python-requests) + ("python-requests-toolbelt" ,python-requests-toolbelt))) + (home-page "https://github.com/pypa/twine") + (synopsis "Collection of utilities for interacting with PyPI") + (description + "@code{twine} currently supports registering projects and uploading +distributions. It authenticates the user over HTTPS, allows them to pre-sign +their files and supports any packaging format (including wheels).") + (license license:asl2.0))) + +(define-public python2-twine + (package-with-python2 python-twine)) + +(define-public python-linecache2 + (package + (name "python-linecache2") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "linecache2" version)) + (sha256 + (base32 + "0z79g3ds5wk2lvnqw0y2jpakjf32h95bd9zmnvp7dnqhf57gy9jb")))) + (build-system python-build-system) + (arguments + `(;; The tests depend on unittest2, and our version is a bit too old. + #:tests? #f)) + (native-inputs + `(("python-pbr" ,python-pbr-minimal))) + (home-page + "https://github.com/testing-cabal/linecache2") + (synopsis "Backports of the linecache module") + (description + "The linecache module allows one to get any line from any file, while +attempting to optimize internally, using a cache, the common case where many +lines are read from a single file.") + (license license:psfl))) + +(define-public python2-linecache2 + (package-with-python2 python-linecache2)) + +(define-public python-traceback2 + (package + (name "python-traceback2") + (version "1.4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "traceback2" version)) + (sha256 + (base32 + "0c1h3jas1jp1fdbn9z2mrgn3jj0hw1x3yhnkxp7jw34q15xcdb05")))) + (build-system python-build-system) + (arguments + `(;; python-traceback2 and python-unittest2 depend on one another. + #:tests? #f)) + (native-inputs + `(("python-pbr" ,python-pbr-minimal))) + (propagated-inputs + `(("python-linecache2" ,python-linecache2))) + (home-page + "https://github.com/testing-cabal/traceback2") + (synopsis "Backports of the traceback module") + (description + "This module provides a standard interface to extract, format and print +stack traces of Python programs. It exactly mimics the behavior of the Python +interpreter when it prints a stack trace.") + (license license:psfl))) + +(define-public python2-traceback2 + (package-with-python2 python-traceback2)) + +(define-public python-ratelimiter + (package + (name "python-ratelimiter") + (version "1.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ratelimiter" version)) + (sha256 + (base32 + "1dhz85mj5bqd2mij84ncs6pz32hgidr79hay4aqfmzaa4rbb497p")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; There are no tests in the pypi archive. + (home-page "https://github.com/RazerM/ratelimiter") + (synopsis "Simple rate limiting object") + (description + "The @code{ratelimiter} module ensures that an operation will not be +executed more than a given number of times during a given period.") + (license license:asl2.0))) + +(define-public python2-ratelimiter + (package-with-python2 python-ratelimiter)) + +(define-public python-dukpy + (package + (name "python-dukpy") + (version "0.3") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/kovidgoyal/dukpy") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "13h21nqzasv4zj32xs61brmc106pr2cx243672crcmwxxnjgaxls")))) + (build-system python-build-system) + (home-page "https://github.com/kovidgoyal/dukpy") + (synopsis "Run JavaScript in python") + (description + "dukpy is a JavaScript runtime environment for Python using the duktape +embeddable JavaScript engine.") + ;; Dukpy is licensed under MIT like the embedded duktape library, + ;; with 'errors.c' as GPL3. + (license (list license:expat license:gpl3)))) + +(define-public python2-dukpy + (package-with-python2 python-dukpy)) + +(define-public python-jsonrpclib-pelix + (package + (name "python-jsonrpclib-pelix") + (version "0.3.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jsonrpclib-pelix" version)) + (sha256 + (base32 + "0f83z5zi7w32vprhk1dyc94ir1bh4hdd57bjdbwkq9ykng8qilhl")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ; no tests in PyPI tarball + (home-page "https://github.com/tcalmant/jsonrpclib/") + (synopsis "JSON-RPC 2.0 client library for Python") + (description + "This library implements the JSON-RPC v2.0 +specification (backwards-compatible) as a client library for Python. This +version is a fork of jsonrpclib by Josh Marshall, usable with Pelix remote +services.") + (license license:asl2.0))) + +(define-public python2-jsonrpclib-pelix + (package-with-python2 python-jsonrpclib-pelix)) + +(define-public python-setuptools-scm-git-archive + (package + (name "python-setuptools-scm-git-archive") + (version "1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "setuptools_scm_git_archive" version)) + (sha256 + (base32 + "1nii1sz5jq75ilf18bjnr11l9rz1lvdmyk66bxl7q90qan85yhjj")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-setuptools-scm" ,python-setuptools-scm))) + (home-page "https://github.com/Changaco/setuptools_scm_git_archive/") + (synopsis "Setuptools_scm plugin for git archives") + (description + "The setuptools_scm_git_archive package is a plugin to +setuptools_scm, which supports obtaining versions from git archives that +belong to tagged versions.") + (license license:expat))) + +(define-public python2-setuptools-scm-git-archive + (package-with-python2 python-setuptools-scm-git-archive)) + +(define-public python-setuptools-git + (package + (name "python-setuptools-git") + (version "1.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "setuptools-git" version)) + (sha256 + (base32 + "0i84qjwp5m0l9qagdjww2frdh63r37km1c48mrvbmaqsl1ni6r7z")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; This is needed for tests. + (add-after 'unpack 'configure-git + (lambda _ + (setenv "HOME" "/tmp") + (invoke "git" "config" "--global" "user.email" "guix") + (invoke "git" "config" "--global" "user.name" "guix") + #t))))) + (native-inputs + `(("git" ,git-minimal))) + (home-page "https://github.com/msabramo/setuptools-git") + (synopsis "Setuptools revision control system plugin for Git") + (description + "This package provides a plugin for Setuptools for revision control with +Git.") + (license license:bsd-3))) + +(define-public python-pyclipper + (package + (name "python-pyclipper") + (version "1.1.0.post3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyclipper" version ".zip")) + (sha256 + (base32 "164yksvqwqvwzh8f8lq92asg87hd8rvcy2xb5vm4y4ccvd5xgb7i")) + (modules '((guix build utils))) + (snippet + '(begin + ;; This file is generated by Cython. + (delete-file "pyclipper/pyclipper.cpp") #t)))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'build 'cythonize-sources + (lambda _ + (with-directory-excursion "pyclipper" + (invoke "cython" "--cplus" "pyclipper.pyx"))))))) + (propagated-inputs + `(("python-setuptools-scm-git-archive" ,python-setuptools-scm-git-archive))) + (native-inputs + `(("python-cython" ,python-cython) + ("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner) + ("python-unittest2" ,python-unittest2) + ("unzip" ,unzip))) + (home-page "https://github.com/greginvm/pyclipper") + (synopsis "Wrapper for Angus Johnson's Clipper library") + (description + "Pyclipper is a Cython wrapper for the C++ translation of the +Angus Johnson's polygon clipping Clipper library (ver. 6.4.2).") + (license license:expat))) + +(define-public python2-pyclipper + (package-with-python2 python-pyclipper)) + +(define-public python2-booleanoperations + (package + (name "python2-booleanoperations") + (version "0.7.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "booleanOperations" version ".zip")) + (sha256 + (base32 + "1hw42fazdpvsn77glx96hwsj9l17mvx37sc5707s08y5w6fx16mn")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (native-inputs + `(("unzip" ,unzip) + ("python2-pytest" ,python2-pytest) + ("python2-pytest-runner" ,python2-pytest-runner))) + (propagated-inputs + `(("python-fonttools" ,python2-fonttools) + ("python-pyclipper" ,python2-pyclipper) + ("python-ufolib" ,python2-ufolib))) + (home-page "https://github.com/typemytype/booleanOperations") + (synopsis "Boolean operations on paths") + (description + "BooleanOperations provides a Python library that enables +boolean operations on paths.") + (license license:expat))) + +(define-public python-tempdir + (package + (name "python-tempdir") + (version "0.7.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "tempdir" version)) + (sha256 + (base32 + "13msyyxqbicr111a294x7fsqbkl6a31fyrqflx3q7k547gnq15k8")))) + (build-system python-build-system) + (home-page "https://pypi.org/project/tempdir/") + (arguments + ;; the package has no tests + '(#:tests? #f)) + (synopsis "Python library for managing temporary directories") + (description + "This library manages temporary directories that are automatically +deleted with all their contents when they are no longer needed. It is +particularly convenient for use in tests.") + (license license:expat))) + +(define-public python2-tempdir + (package-with-python2 python-tempdir)) + +(define-public python-activepapers + (package + (name "python-activepapers") + (version "0.2.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ActivePapers.Py" version)) + (sha256 + (base32 + "12wkhjh90ffipjzv10swndp2xv9hd7xrxvg6v0n4n3i411pj4xb8")))) + (build-system python-build-system) + (arguments + `(#:modules ((ice-9 ftw) + (srfi srfi-1) + (guix build utils) + (guix build python-build-system)) + + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'delete-python2-code + (lambda _ + (for-each delete-file + '("lib/activepapers/builtins2.py" + "lib/activepapers/standardlib2.py" + "lib/activepapers/utility2.py")))) + (replace 'check + (lambda _ + ;; Deactivate the test cases that download files + (setenv "NO_NETWORK_ACCESS" "1") + ;; For some strange reason, some tests fail if nosetests runs all + ;; test modules in a single execution. They pass if each test + ;; module is run individually. + (for-each (lambda (filename) + (invoke "nosetests" + (string-append "tests/" filename))) + (scandir "tests" + (lambda (filename) + (string-suffix? ".py" filename))))))))) + (native-inputs + `(("python-tempdir" ,python-tempdir) + ("python-nose" ,python-nose))) + (propagated-inputs + `(("python-h5py" ,python-h5py))) + (home-page "https://www.activepapers.org/") + (synopsis "Executable papers for scientific computing") + (description + "ActivePapers is a tool for working with executable papers, which +combine data, code, and documentation in single-file packages, +suitable for publication as supplementary material or on repositories +such as figshare or Zenodo.") + (properties `((python2-variant . ,(delay python2-activepapers)))) + (license license:bsd-3))) + +(define-public python2-activepapers + (let ((base (package-with-python2 + (strip-python2-variant python-activepapers)))) + (package + (inherit base) + (arguments + (substitute-keyword-arguments (package-arguments base) + ((#:phases phases) + `(modify-phases ,phases + (delete 'delete-python2-code) + (add-after 'unpack 'delete-python3-code + (lambda _ + (for-each delete-file + '("lib/activepapers/builtins3.py" + "lib/activepapers/standardlib3.py" + "lib/activepapers/utility3.py"))))))))))) + +(define-public python-semver + (package + (name "python-semver") + (version "2.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "semver" version)) + (sha256 + (base32 + "183kg1rhzz3hqizvphkd8hlbf1zxfx8737zhfkmqzxi71jmdw7pd")))) + (build-system python-build-system) + (native-inputs + `(("python-appdirs" ,python-appdirs) + ("python-distlib" ,python-distlib) + ("python-importlib-metadata" ,python-importlib-metadata) + ("python-filelock" ,python-filelock) + ("python-six" ,python-six) + ("python-tox" ,python-tox) + ("python-virtualenv" ,python-virtualenv))) + (home-page "https://github.com/k-bx/python-semver") + (synopsis "Python helper for Semantic Versioning") + (description "This package provides a Python library for +@url{Semantic Versioning, http://semver.org/}.") + (license license:bsd-3))) + +(define-public python2-semver + (package-with-python2 python-semver)) + +(define-public python-pyro4 + (package + (name "python-pyro4") + (version "4.77") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Pyro4" version)) + (sha256 + (base32 "0gsjg869y4gpy265s1gj1f2qy6jn5iz8r2bwwnq78r1r5yi15zib")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ;FIXME: Some tests require network access. + (native-inputs + `(("python-cloudpickle" ,python-cloudpickle) + ("python-dill" ,python-dill) + ("python-msgpack" ,python-msgpack))) + (propagated-inputs + `(("python-serpent" ,python-serpent))) + (home-page "https://pyro4.readthedocs.io") + (synopsis "Distributed object middleware for Python") + (description + "Pyro enables you to build applications in which objects can talk to each +other over the network. You can just use normal Python method calls to call +objects on other machines, also known as remote procedure calls (RPC).") + (license license:expat))) + +(define-public python2-pyro + (package + (name "python2-pyro") + (version "3.16") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Pyro" version)) + (file-name (string-append "Pyro-" version ".tar.gz")) + (sha256 + (base32 + "0y75wzdqbjy565rpxaxscav4j8xg060sa90lnmb7aypgaf251v8v")))) + (build-system python-build-system) + (arguments + ;; Pyro is not compatible with Python 3 + `(#:python ,python-2 + ;; Pyro has no test cases for automatic execution + #:tests? #f)) + (home-page "https://pythonhosted.org/Pyro/") + (synopsis "Distributed object manager for Python") + (description "Pyro is a Distributed Object Technology system +written in Python that is designed to be easy to use. It resembles +Java's Remote Method Invocation (RMI). It has less similarity to CORBA, +which is a system and language independent Distributed Object Technology +and has much more to offer than Pyro or RMI. Pyro 3.x is no +longer maintained. New projects should use Pyro4 instead, which +is the new Pyro version that is actively developed.") + (license license:expat))) + +(define-public python2-scientific + (package + (name "python2-scientific") + (version "2.9.4") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/khinsen/ScientificPython") + (commit (string-append "rel" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "16l48aj9fps9r7jyk8gpxppwrv0fqvlc13sayxskz28r5s6sjwbl")))) + (build-system python-build-system) + (inputs + `(("netcdf" ,netcdf))) + (propagated-inputs + `(("python-numpy" ,python2-numpy-1.8) + ("python-pyro" ,python2-pyro))) + (arguments + ;; ScientificPython is not compatible with Python 3 + `(#:python ,python-2 + #:tests? #f ; No test suite + #:phases + (modify-phases %standard-phases + (replace 'build + (lambda* (#:key inputs #:allow-other-keys) + (invoke "python" "setup.py" "build" + (string-append "--netcdf_prefix=" + (assoc-ref inputs "netcdf")))))))) + (home-page "http://dirac.cnrs-orleans.fr/ScientificPython") + (synopsis "Python modules for scientific computing") + (description "ScientificPython is a collection of Python modules that are +useful for scientific computing. Most modules are rather general (Geometry, +physical units, automatic derivatives, ...) whereas others are more +domain-specific (e.g. netCDF and PDB support). The library is currently +not actively maintained and works only with Python 2 and NumPy < 1.9.") + (license license:cecill-c))) + +(define-public python2-mmtk + (package + (name "python2-mmtk") + (version "2.7.12") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/khinsen/MMTK") + (commit (string-append "rel" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1fqwh3ba9jd42nigvn5shndgwb1zy7kh9520ncvqci7n8ffjr6p1")))) + (build-system python-build-system) + (native-inputs + `(("netcdf" ,netcdf))) + (propagated-inputs + `(("python-scientific" ,python2-scientific) + ("python-tkinter" ,python-2 "tk"))) + (arguments + `(#:python ,python-2 + #:tests? #f + #:phases + (modify-phases %standard-phases + (add-before 'build 'includes-from-scientific + (lambda* (#:key inputs #:allow-other-keys) + (mkdir-p "Include/Scientific") + (copy-recursively + (string-append + (assoc-ref inputs "python-scientific") + "/include/python2.7/Scientific") + "Include/Scientific")))))) + (home-page "http://dirac.cnrs-orleans.fr/MMTK") + (synopsis "Python library for molecular simulation") + (description "MMTK is a library for molecular simulations with an emphasis +on biomolecules. It provides widely used methods such as Molecular Dynamics +and normal mode analysis, but also basic routines for implementing new methods +for simulation and analysis. The library is currently not actively maintained +and works only with Python 2 and NumPy < 1.9.") + (license license:cecill-c))) + +(define-public python-phonenumbers + (package + (name "python-phonenumbers") + (version "8.9.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "phonenumbers" version)) + (sha256 + (base32 + "03fmrgb4r8x3ykmddjs9i3zhs703in8smikj3a6447blqpimwyh1")))) + (build-system python-build-system) + (home-page + "https://github.com/daviddrysdale/python-phonenumbers") + (synopsis + "Python library for dealing with international phone numbers") + (description + "This package provides a Python port of Google's libphonenumber library.") + (license license:asl2.0))) + +(define-public python2-phonenumbers + (package-with-python2 python-phonenumbers)) + +(define-public python-send2trash + (package + (name "python-send2trash") + (version "1.5.0") + (source + (origin (method git-fetch) + ;; Source tarball on PyPI doesn't include tests. + (uri (git-reference + (url "https://github.com/hsoft/send2trash") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1c76zldhw2ay7q7r00nnzcampjz9lkqfcbzqpm0iqp5i6bmmv30v")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-before 'check 'pre-check + (lambda _ + (mkdir-p "/tmp/foo") + (setenv "HOME" "/tmp/foo") + #t))))) + (home-page "https://github.com/hsoft/send2trash") + (synopsis "Send files to the user's @file{~/Trash} directory") + (description "This package provides a Python library to send files to the +user's @file{~/Trash} directory.") + (properties `((python2-variant . ,(delay python2-send2trash)))) + (license license:bsd-3))) + +(define-public python2-send2trash + (package + (inherit (package-with-python2 (strip-python2-variant python-send2trash))) + (arguments + (substitute-keyword-arguments (package-arguments python-send2trash) + ((#:phases phases) + `(modify-phases ,phases + (add-before 'check 'setenv + (lambda _ + (setenv "PYTHONPATH" + (string-append (getcwd) ":" (getenv "PYTHONPATH"))) + #t)))))))) + +(define-public python-yapf + (package + (name "python-yapf") + (version "0.29.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "yapf" version)) + (sha256 + (base32 + "1pj3xzblmbssshi889b6n9hwqbjpabw6j0fimlng2sshd3226bki")))) + (build-system python-build-system) + (home-page "https://github.com/google/yapf") + (synopsis "Formatter for Python code") + (description "YAPF is a formatter for Python code. It's based off of +@dfn{clang-format}, developed by Daniel Jasper. In essence, the algorithm +takes the code and reformats it to the best formatting that conforms to the +style guide, even if the original code didn't violate the style guide.") + (license license:asl2.0))) + +(define-public python2-yapf + (package-with-python2 python-yapf)) + +(define-public python-gyp + (let ((commit "5e2b3ddde7cda5eb6bc09a5546a76b00e49d888f") + (revision "0")) + (package + (name "python-gyp") + ;; Google does not release versions, + ;; based on second most recent commit date. + (version (git-version "0.0.0" revision commit)) + (source + (origin + ;; Google does not release tarballs, + ;; git checkout is needed. + (method git-fetch) + (uri (git-reference + (url "https://chromium.googlesource.com/external/gyp") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0fr7nxcrk292djmxzpcjaphnsd123k31gp8jnd91vwknhq6snmv9")))) + (build-system python-build-system) + (home-page "https://gyp.gsrc.io/") + (synopsis "GYP is a Meta-Build system") + (description + "GYP builds build systems for large, cross platform applications. +It can be used to generate XCode projects, Visual Studio projects, Ninja build +files, and Makefiles.") + (license license:bsd-3)))) + +(define-public python2-gyp + (package-with-python2 python-gyp)) + +(define-public python-whatever + (package + (name "python-whatever") + (version "0.6") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/Suor/whatever") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1q7ajgqjfivxqsqgnhp4lc4p6jxyh4zprcsdbpd6dw54inaf0av5")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "py.test")))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/Suor/whatever") + (synopsis "Make anonymous functions by partial application of operators") + (description "@code{whatever} provides an easy way to make anonymous +functions by partial application of operators.") + (license license:bsd-3))) + +(define-public python2-whatever + (package-with-python2 python-whatever)) + +(define-public python-funcy + (package + (name "python-funcy") + (version "1.11") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/Suor/funcy") + (commit version))) + (sha256 + (base32 "1s98vkjnq3zq71737hn8xa15kssvmy1sfzsll3vrlv53902418mw")) + (file-name (git-file-name name version)))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "py.test")))))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-whatever" ,python-whatever))) + (home-page "https://github.com/Suor/funcy") + (synopsis "Functional tools") + (description "@code{funcy} is a library that provides functional tools. +Examples are: +@enumerate +@item merge - Merges collections of the same type +@item walk - Type-preserving map +@item select - Selects a part of a collection +@item take - Takes the first n items of a collection +@item first - Takes the first item of a collection +@item remove - Predicated-removes items of a collection +@item concat - Concatenates two collections +@item flatten - Flattens a collection with subcollections +@item distinct - Returns only distinct items +@item split - Predicated-splits a collection +@item split_at - Splits a collection at a given item +@item group_by - Groups items by group +@item pairwise - Pairs off adjacent items +@item partial - Partially-applies a function +@item curry - Curries a function +@item compose - Composes functions +@item complement - Complements a predicate +@item all_fn - \"all\" with predicate +@end enumerate") + (license license:bsd-3))) + +(define-public python2-funcy + (package-with-python2 python-funcy)) + +(define-public python-isoweek + (package + (name "python-isoweek") + (version "1.3.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "isoweek" version)) + (sha256 + (base32 + "1s7zsf0pab0l9gn6456qadnz5i5h90hafcjwnhx5mq23qjxggwvk")))) + (build-system python-build-system) + (home-page "https://github.com/gisle/isoweek") + (synopsis "Objects representing a week") + (description "The @code{isoweek} module provide the class Week that +implements the week definition of ISO 8601. This standard also defines +a notation for identifying weeks; yyyyWww (where the W is a literal). +Week instances stringify to this form.") + (license license:bsd-3))) + +(define-public python2-isoweek + (package-with-python2 python-isoweek)) + +(define-public python-tokenize-rt + (package + (name "python-tokenize-rt") + (version "2.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "tokenize-rt" version)) + (sha256 + (base32 + "1yjvbz7rvrz31zjyax1cgy3xhf4wb3j18jwnj4bnl77ca4gliyiw")))) + (build-system python-build-system) + (home-page "https://github.com/asottile/tokenize-rt") + (synopsis "Wrapper around the stdlib tokenize which roundtrips.") + (description + "This Python library is a wrapper around @code{tokenize} from the Python +standard library. It provides two additional tokens @code{ESCAPED_NL} and +@code{UNIMPORTANT_WS}, and a @code{Token} data type. Use @code{src_to_tokens} +and @code{tokens_to_src} to roundtrip.") + (license license:expat))) + +(define-public python-future-fstrings + (package + (name "python-future-fstrings") + (version "0.4.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "future_fstrings" version)) + (sha256 + (base32 + "0ydxqz2dvns44g55p8ix2x18qkfk3aaz0m0dc70f3g6n8js35h47")))) + (build-system python-build-system) + (propagated-inputs + `(("python-tokenize-rt" ,python-tokenize-rt))) + (home-page "https://github.com/asottile/future-fstrings") + (synopsis "Backport of fstrings to Python < 3.6") + (description + "This package provides a UTF-8 compatible encoding +@code{future_fstrings}, which performs source manipulation. It decodes the +source bytes using the UTF-8 encoding and then rewrites Python 3.6 style +@code{f} strings.") + (license license:expat))) + +(define-public python-typed-ast + (package + (name "python-typed-ast") + (version "1.4.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/python/typed_ast") + (commit version))) + (sha256 + (base32 "0l0hz809f7i356kmqkvfsaswiidb98j9hs9rrjnfawzqcbffzgyb")) + (file-name (git-file-name name version)))) + (build-system python-build-system) + (arguments + `(#:modules ((guix build utils) + (guix build python-build-system) + (ice-9 ftw) + (srfi srfi-1) + (srfi srfi-26)) + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (let ((cwd (getcwd))) + (setenv "PYTHONPATH" + (string-append cwd "/build/" + (find (cut string-prefix? "lib" <>) + (scandir (string-append cwd "/build"))) + ":" + (getenv "PYTHONPATH")))) + (invoke "pytest") + #t))))) + (native-inputs `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/python/typed_ast") + (synopsis "Fork of Python @code{ast} modules with type comment support") + (description "This package provides a parser similar to the standard +@code{ast} library. Unlike @code{ast}, the parsers in @code{typed_ast} +include PEP 484 type comments and are independent of the version of Python +under which they are run. The @code{typed_ast} parsers produce the standard +Python AST (plus type comments), and are both fast and correct, as they are +based on the CPython 2.7 and 3.7 parsers.") + ;; See the file "LICENSE" for the details. + (license (list license:psfl + license:asl2.0 + license:expat)))) ;ast27/Parser/spark.py + +(define-public python-typing + (package + (name "python-typing") + (version "3.7.4.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "typing" version)) + (sha256 + (base32 + "08xs7s5pyq99hbrzw23inczmidz90krvpv9q5p1qrvh6yzrydpwi")))) + (build-system python-build-system) + (home-page "https://docs.python.org/3/library/typing.html") + (synopsis "Type hints for Python") + (description "This is a backport of the standard library @code{typing} +module to Python versions older than 3.5. Typing defines a standard notation +for Python function and variable type annotations. The notation can be used +for documenting code in a concise, standard format, and it has been designed +to also be used by static and runtime type checkers, static analyzers, IDEs +and other tools.") + (license license:psfl))) + +(define-public python2-typing + (package-with-python2 python-typing)) + +(define-public python-typing-extensions + (package + (name "python-typing-extensions") + (version "3.7.4.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "typing_extensions" version)) + (sha256 + (base32 + "1bk9b60s3rm1c8cwhv0bl3gh0x43153xxa6jpyllk9mc7jd5ivkr")))) + (build-system python-build-system) + (home-page + "https://github.com/python/typing/blob/master/typing_extensions/README.rst") + (synopsis "Experimental type hints for Python") + (description + "The typing_extensions module contains additional @code{typing} hints not +yet present in the of the @code{typing} standard library. +Included are implementations of: +@enumerate +@item ClassVar +@item ContextManager +@item Counter +@item DefaultDict +@item Deque +@item NewType +@item NoReturn +@item overload +@item Protocol +@item runtime +@item Text +@item Type +@item TYPE_CHECKING +@item AsyncGenerator +@end enumerate\n") + (license license:psfl))) + +(define-public bpython + (package + (name "bpython") + (version "0.18") + (source + (origin + (method url-fetch) + (uri (pypi-uri "bpython" version)) + (sha256 + (base32 "1hl6frgvr2lqaxqczl8amg9xih32b3gzv429vs0qrjb8wpdj1k2n")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'remove-failing-test + (lambda _ + ;; Remove failing test. FIXME: make it pass + (delete-file "bpython/test/test_args.py") + #t)) + (add-after 'wrap 'add-aliases + ;; for symmetry to bpython2, add symlinks bypthon3, bpdb3, etc. + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (for-each + (lambda (old new) + (symlink old (string-append out "/bin/" new))) + '("bpython" "bpython-curses" "bpython-urwid" "bpdb") + '("bpython3" "bpython3-curses" "bpython3-urwid" "bpdb3"))) + #t))))) + (propagated-inputs + `(("python-pygments" ,python-pygments) + ("python-requests" ,python-requests) + ("python-babel" ,python-babel) ; optional, for internationalization + ("python-curtsies" ,python-curtsies) ; >= 0.1.18 + ("python-greenlet" ,python-greenlet) + ("python-urwid" ,python-urwid) ; for bpython-urwid only + ("python-six" ,python-six))) + (native-inputs + `(("python-sphinx" ,python-sphinx) + ("python-mock" ,python-mock))) + (home-page "https://bpython-interpreter.org/") + (synopsis "Fancy interface to the Python interpreter") + (description "Bpython is a fancy interface to the Python +interpreter. bpython's main features are + +@enumerate +@item in-line syntax highlighting, +@item readline-like autocomplete with suggestions displayed as you type, +@item expected parameter list for any Python function, +@item \"rewind\" function to pop the last line of code from memory and + re-evaluate, +@item send the code you've entered off to a pastebin, +@item save the code you've entered to a file, and +@item auto-indentation. +@end enumerate") + (license license:expat))) + +(define-public bpython2 + (let ((base (package-with-python2 + (strip-python2-variant bpython)))) + (package (inherit base) + (name "bpython2") + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'remove-failing-test + (lambda _ + ;; Remove failing test. FIXME: make it pass + (delete-file "bpython/test/test_args.py") + ;; Disable failing test-cases (renaming inhibits they are + ;; discovered) + (substitute* "bpython/test/test_curtsies_repl.py" + (("^(\\s*def )(test_get_last_word_with_prev_line\\W)" _ a b) + (string-append a "xxx_off_" b)) + (("^(\\s*def )(test_complex\\W)" _ a b) + (string-append a "xxx_off_" b))) + #t)) + (add-before 'build 'rename-scripts + ;; rename the scripts to bypthon2, bpdb2, etc. + (lambda _ + (substitute* "setup.py" + (("^(\\s+'bpdb)(\\s+=.*',?)\\s*?$" _ name rest) + (string-append name "2" rest "\n")) + (("^(\\s+'bpython)(-\\S+)?(\\s+=.*',?)\\s*?$" _ name sub rest) + (string-append name "2" (or sub "") rest "\n"))) + #t)))))))) + +(define-public python-pyinotify + (package + (name "python-pyinotify") + (version "0.9.6") + (source (origin + (method url-fetch) + (uri (pypi-uri "pyinotify" version)) + (sha256 + (base32 + "1x3i9wmzw33fpkis203alygfnrkcmq9w1aydcm887jh6frfqm6cw")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) ;no tests + (home-page "https://github.com/seb-m/pyinotify") + (synopsis "Python library for monitoring inotify events") + (description + "@code{pyinotify} provides a Python interface for monitoring +file system events on Linux.") + (license license:expat))) + +(define-public python2-pyinotify + (package-with-python2 python-pyinotify)) + +;; Ada parser uses this version. +(define-public python2-quex-0.67.3 + (package + (name "python2-quex") + (version "0.67.3") + (source + (origin + (method url-fetch) + (uri (string-append "mirror://sourceforge/quex/HISTORY/" + (version-major+minor version) + "/quex-" version ".zip")) + (sha256 + (base32 + "14gv8ll3ipqv4kyc2xiy891nrmjl4ic823zfyx8hassagyclyppw")))) + (build-system python-build-system) + (native-inputs + `(("unzip" ,unzip))) + (arguments + `(#:python ,python-2 + #:tests? #f + #:phases + (modify-phases %standard-phases + (delete 'configure) + (delete 'build) + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (share/quex (string-append out "/share/quex")) + (bin (string-append out "/bin"))) + (copy-recursively "." share/quex) + (mkdir-p bin) + (symlink (string-append share/quex "/quex-exe.py") + (string-append bin "/quex")) + #t)))))) + (native-search-paths + (list (search-path-specification + (variable "QUEX_PATH") + (files '("share/quex"))))) + (home-page "http://quex.sourceforge.net/") + (synopsis "Lexical analyzer generator in Python") + (description "@code{quex} is a lexical analyzer generator in Python.") + (license license:lgpl2.1+))) ; Non-military + +(define-public python2-quex + (package (inherit python2-quex-0.67.3) + (name "python2-quex") + (version "0.68.1") + (source + (origin + (method url-fetch) + (uri (string-append "mirror://sourceforge/quex/DOWNLOAD/quex-" version ".tar.gz")) + (sha256 + (base32 + "0svc9nla3b9145d6b7fb9dizx412l3difzqw0ilh9lz52nsixw8j")) + (file-name (string-append name "-" version ".tar.gz")))))) + +(define-public python-more-itertools + (package + (name "python-more-itertools") + (version "8.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "more-itertools" version)) + (sha256 + (base32 + "01x5nwm1zxmnd06cllbdd095xxc2nd25ing1a726m2kd30rbkpdi")))) + (build-system python-build-system) + (home-page "https://github.com/erikrose/more-itertools") + (synopsis "More routines for operating on iterables, beyond itertools") + (description "Python's built-in @code{itertools} module implements a +number of iterator building blocks inspired by constructs from APL, Haskell, +and SML. @code{more-itertools} includes additional building blocks for +working with iterables.") + (properties `((python2-variant . ,(delay python2-more-itertools)))) + (license license:expat))) + +;; The 5.x series are the last versions supporting Python 2.7. +(define-public python2-more-itertools + (package + (inherit python-more-itertools) + (name "python2-more-itertools") + (version "5.0.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "more-itertools" version)) + (sha256 + (base32 + "1r12cm6mcdwdzz7d47a6g4l437xsvapdlgyhqay3i2nrlv03da9q")))) + (arguments + `(#:python ,python-2)) + (propagated-inputs + `(("python2-six" ,python2-six-bootstrap))))) + +(define-public python-latexcodec + (package + (name "python-latexcodec") + (version "1.0.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "latexcodec" version)) + (sha256 + (base32 "0wnp3yqcgx0rpy8dz51vh75lbp2qif67da19zi7m3ca98n887hgb")))) + (build-system python-build-system) + (inputs + `(("python-six" ,python-six))) + (home-page "https://readthedocs.org/projects/latexcodec/") + (synopsis "Work with LaTeX code in Python") + (description "Lexer and codec to work with LaTeX code in Python.") + (license license:expat))) + +(define-public python-pybtex + (package + (name "python-pybtex") + (version "0.22.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pybtex" version)) + (sha256 + (base32 "070wfcmxrd7xg1si421mi9150gmx2qwx431nwf69sq3hhmgnx080")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose))) + (inputs + `(("python-latexcodec" ,python-latexcodec) + ("python-pyyaml" ,python-pyyaml) + ("python-six" ,python-six))) + (arguments + `(#:test-target "nosetests")) + (home-page "https://pybtex.org/") + (synopsis "BibTeX-compatible bibliography processor") + (description "Pybtex is a BibTeX-compatible bibliography processor written +in Python. You can simply type pybtex instead of bibtex.") + (license license:expat))) + +(define-public python-onetimepass + (package + (name "python-onetimepass") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "onetimepass" version)) + (sha256 + (base32 "09vagxgbq78wvq4xbikmn2hpqqsa2i96kqsmphf7dqynfv0dlsd5")))) + (build-system python-build-system) + (propagated-inputs `(("python-six" ,python-six))) + (home-page "https://github.com/tadeck/onetimepass/") + (synopsis "One-time password library") + (description "Python one-time password library for HMAC-based (HOTP) and +time-based (TOTP) passwords.") + (license license:expat))) + +(define-public python-parso + (package + (name "python-parso") + (version "0.7.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "parso" version)) + (sha256 + (base32 "1f9fc99mjx0h2ad4mgsid728nnmw58hvnq3411g8ljlr9dr49fna")))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ (invoke "pytest" "-vv")))))) + (home-page "https://github.com/davidhalter/parso") + (synopsis "Python Parser") + (description "Parso is a Python parser that supports error recovery and +round-trip parsing for different Python versions (in multiple Python versions). +Parso is also able to list multiple syntax errors in your Python file.") + (license license:expat))) + +(define-public python2-parso + (package-with-python2 python-parso)) + +(define-public python-async-generator + (package + (name "python-async-generator") + (version "1.10") + (source + (origin + (method url-fetch) + (uri (pypi-uri "async_generator" version)) + (sha256 + (base32 + "0i11f6z6lix8ixi3vsk6s76zvvpmgrw6zjrcwjm0m4hjdh83vfvf")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/python-trio/async_generator") + (synopsis "Async generators and context managers for Python 3.5+") + (description "@code{async_generator} back-ports Python 3.6's native async +generators and Python 3.7's context managers into Python 3.5.") + ;; Dual licensed. + (license (list license:expat license:asl2.0)))) + +(define-public python-async-timeout + (package + (name "python-async-timeout") + (version "3.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "async-timeout" version)) + (sha256 + (base32 + "0pscbyr840m7fyfc3r8zv9kgkwdcn9f78p7zsrczciwd09m82g0c")))) + (build-system python-build-system) + (home-page "https://github.com/aio-libs/async_timeout/") + (synopsis "Timeout context manager for asyncio programs") + (description "@code{async-timeout} provides a timeout timeout context +manager compatible with @code{asyncio}.") + (license license:asl2.0))) + +(define-public python-glob2 + (package + (name "python-glob2") + (version "0.7") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/miracle2k/python-glob2") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "160nh2ay9lw2hi0rixpzb2k87r6ql56k0j2cm87lqz8xc8zbw919")))) + (build-system python-build-system) + (home-page "https://github.com/miracle2k/python-glob2/") + (synopsis "Extended Version of the python buildin glob module") + (description "This is an extended version of the Python +@url{http://docs.python.org/library/glob.html, built-in glob module} which +adds: + +@itemize +@item The ability to capture the text matched by glob patterns, and return +those matches alongside the file names. +@item A recursive @code{**} globbing syntax, akin for example to the +@code{globstar} option of Bash. +@item The ability to replace the file system functions used, in order to glob +on virtual file systems. +@item Compatible with Python 2 and Python 3 (tested with 3.3). +@end itemize + +Glob2 currently based on the glob code from Python 3.3.1.") + (license license:bsd-2))) + +(define-public python2-glob2 + (package-with-python2 python-glob2)) + +(define-public python-gipc + (package + (name "python-gipc") + (version "0.6.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "gipc" version ".zip")) + (sha256 + (base32 + "0pd9by719qh882hqs6xpby61sn1x5h98hms5p2p8yqnycrf1s0h2")))) + (build-system python-build-system) + (native-inputs + `(("unzip" ,unzip))) + (propagated-inputs + `(("python-gevent" ,python-gevent))) + (home-page "https://gehrcke.de/gipc/") + (synopsis "Child process management in the context of gevent") + (description "Usage of Python's multiprocessing package in a +gevent-powered application may raise problems. With @code{gipc}, +process-based child processes can safely be created anywhere within a +gevent-powered application.") + (license license:expat))) + +(define-public python2-gipc + (package-with-python2 python-gipc)) + +(define-public python-fusepy + (package + (name "python-fusepy") + (version "2.0.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "fusepy" version)) + (sha256 + (base32 + "0v5grm4zyf58hsplwsxfbihddw95lz9w8cy3rpzbyha287swgx8h")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'build 'set-library-file-name + (lambda* (#:key inputs #:allow-other-keys) + (let ((fuse (assoc-ref inputs "fuse"))) + (substitute* "fuse.py" + (("find_library\\('fuse'\\)") + (string-append "'" fuse "/lib/libfuse.so'"))) + #t)))))) + (propagated-inputs + `(("fuse" ,fuse))) + (home-page "https://github.com/fusepy/fusepy") + (synopsis "Simple ctypes bindings for FUSE") + (description "Python module that provides a simple interface to FUSE and +MacFUSE. The binding is created using the standard @code{ctypes} library.") + (license license:isc))) + +(define-public python2-fusepy + (package-with-python2 python-fusepy)) + +(define-public python-fusepyng + (package + (name "python-fusepyng") + (version "1.0.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "fusepyng" version)) + (sha256 + (base32 + "17w9iw6m6zjbmnhs4ikd27pq4mb1nan6k4ahlwyz40463vw6wkwb")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'set-libfuse-path + (lambda* (#:key inputs #:allow-other-keys) + (let ((fuse (assoc-ref inputs "fuse"))) + (substitute* "fusepyng.py" + (("os.environ.get\\('FUSE_LIBRARY_PATH'\\)") + (string-append "\"" fuse "/lib/libfuse.so\"")))) + #t))))) + (inputs + `(("fuse" ,fuse))) + (propagated-inputs + `(("python-paramiko" ,python-paramiko))) + (home-page "https://github.com/rianhunter/fusepyng") + (synopsis "Simple ctypes bindings for FUSE") + (description "@code{fusepyng} is a Python module that provides a simple +interface to FUSE on various operating systems. It's just one file and is +implemented using @code{ctypes}.") + (license license:isc))) + +(define-public python2-gdrivefs + (package + (name "python2-gdrivefs") + (version "0.14.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri "gdrivefs" version)) + (sha256 + (base32 + "0v9sp2cfg4ki3wagkwf3rnfpjhvgf845anz3757il9z95yvvcvb7")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + (add-before 'build 'patch-setup-py + (lambda _ + ;; Update requirements from dependency==version + ;; to dependency>=version + (substitute* "gdrivefs/resources/requirements.txt" + (("==") ">=")) + #t))))) + (native-inputs + `(("python2-gipc" ,python2-gipc) + ("python2-gevent" ,python2-gevent) + ("python2-greenlet" ,python2-greenlet) + ("python2-httplib2" ,python2-httplib2) + ("python2-uritemplate" ,python2-uritemplate) + ("python2-oauth2client" ,python2-oauth2client) + ("python2-six" ,python2-six))) + (propagated-inputs + `(("python2-dateutil" ,python2-dateutil) + ("python2-fusepy" ,python2-fusepy) + ("python2-google-api-client" ,python2-google-api-client))) + (home-page "https://github.com/dsoprea/GDriveFS") + (synopsis "Mount Google Drive as a local file system") + (description "@code{gdrivefs} provides a FUSE wrapper for Google Drive +under Python 2.7.") + (license license:gpl2))) + +(define-public python-userspacefs + (package + (name "python-userspacefs") + (version "1.0.13") + (source + (origin + (method url-fetch) + (uri (pypi-uri "userspacefs" version)) + (sha256 + (base32 + "0kyz52jyxw3m7hqvn5g6z0sx9cq6k0nq1wj44lvdrghdljjgyk2z")))) + (build-system python-build-system) + (propagated-inputs + `(("python-fusepyng" ,python-fusepyng))) + (home-page "https://github.com/rianhunter/userspacefs") + (synopsis "User-space file systems for Python") + (description + "@code{userspacefs} is a library that allows you to easily write +user-space file systems in Python.") + (license license:gpl3+))) + +(define-public pybind11 + (package + (name "pybind11") + (version "2.4.3") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/pybind/pybind11") + (commit (string-append "v" version)))) + (sha256 + (base32 + "0k89w4bsfbpzw963ykg1cyszi3h3nk393qd31m6y46pcfxkqh4rd")) + (file-name (git-file-name name version)))) + (build-system cmake-build-system) + (native-inputs + `(("python" ,python-wrapper) + + ;; The following dependencies are used for tests. + ("python-pytest" ,python-pytest) + ("catch" ,catch-framework2-1) + ("eigen" ,eigen))) + (arguments + `(#:configure-flags + (list (string-append "-DCATCH_INCLUDE_DIR=" + (assoc-ref %build-inputs "catch") + "/include/catch")) + + #:phases (modify-phases %standard-phases + (add-after 'install 'install-python + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (with-directory-excursion "../source" + (setenv "PYBIND11_USE_CMAKE" "yes") + (invoke "python" "setup.py" "install" + "--single-version-externally-managed" + "--root=/" + (string-append "--prefix=" out))))))) + + #:test-target "check")) + (home-page "https://github.com/pybind/pybind11/") + (synopsis "Seamless operability between C++11 and Python") + (description + "@code{pybind11} is a lightweight header-only library that exposes C++ +types in Python and vice versa, mainly to create Python bindings of existing +C++ code. Its goals and syntax are similar to the @code{Boost.Python} +library: to minimize boilerplate code in traditional extension modules by +inferring type information using compile-time introspection.") + (license license:bsd-3))) + +(define-public python-fasteners + (package + (name "python-fasteners") + (version "0.15") + (source + (origin + (method url-fetch) + (uri (pypi-uri "fasteners" version)) + (sha256 + (base32 + "1vzmz1xh38b84dv0f4hlp7arwmx8wjlih6lf964bpy8dnyk6s5rs")))) + (build-system python-build-system) + (propagated-inputs + `(("python-monotonic" ,python-monotonic) + ("python-six" ,python-six))) + (native-inputs + `(("python-testtools" ,python-testtools))) + (home-page "https://github.com/harlowja/fasteners") + (synopsis "Python package that provides useful locks") + (description + "This package provides a Python program that provides following locks: + +@itemize +@item Locking decorator +@item Reader-writer locks +@item Inter-process locks +@item Generic helpers +@end itemize\n") + (properties `((python2-variant . ,(delay python2-fasteners)))) + (license license:asl2.0))) + +(define-public python2-fasteners + (let ((base (package-with-python2 (strip-python2-variant python-fasteners)))) + (package + (inherit base) + (propagated-inputs + `(("python2-futures" ,python2-futures) + ,@(package-propagated-inputs base)))))) + +(define-public python-requests-file + (package + (name "python-requests-file") + (version "1.4.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "requests-file" version)) + (sha256 + (base32 + "1yp2jaxg3v86pia0q512dg3hz6s9y5vzdivsgrba1kds05ial14g")))) + (build-system python-build-system) + (propagated-inputs + `(("python-requests" ,python-requests) + ("python-six" ,python-six))) + (home-page + "https://github.com/dashea/requests-file") + (synopsis "File transport adapter for Requests") + (description + "Requests-File is a transport adapter for use with the Requests Python +library to allow local file system access via @code{file://} URLs.") + (license license:asl2.0))) + +(define-public python2-requests-file + (package-with-python2 python-requests-file)) + +(define-public python-identify + (package + (name "python-identify") + (version "1.4.25") + (source + (origin + ;; There are no tests in the PyPI tarball. + (method git-fetch) + (uri (git-reference + (url "https://github.com/chriskuehl/identify") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1fqgci6skckcq0x5pnxh6k2qjzn1ndsrgha1j6wwv1ld4g9bd3hz")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest" "-vv")))))) + (native-inputs + `(("python-coverage" ,python-coverage) + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-editdistance" ,python-editdistance))) + (home-page "https://github.com/chriskuehl/identify") + (synopsis "File identification library for Python") + (description + "@code{identify} is a file identification library for Python. Given +a file (or some information about a file), return a set of standardized tags +identifying what the file is.") + (license license:expat))) + +(define-public python-tldextract + (package + (name "python-tldextract") + (version "2.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "tldextract" version)) + (sha256 + (base32 + "1d5s8v6kpsgazyahflhji1cfdcf89rv7l7z55v774bhzvcjp2y99")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-responses" ,python-responses))) + (propagated-inputs + `(("python-idna" ,python-idna) + ("python-requests" ,python-requests) + ("python-requests-file" ,python-requests-file))) + (home-page + "https://github.com/john-kurkowski/tldextract") + (synopsis + "Separate the TLD from the registered domain and subdomains of a URL") + (description + "TLDExtract accurately separates the TLD from the registered domain and +subdomains of a URL, using the Public Suffix List. By default, this includes +the public ICANN TLDs and their exceptions. It can optionally support the +Public Suffix List's private domains as well.") + (license license:bsd-3))) + +(define-public python2-tldextract + (package-with-python2 python-tldextract)) + +(define-public python-nodeenv + (package + (name "python-nodeenv") + (version "1.4.0") + (source + (origin + ;; There's no tarball in PyPI. + (method git-fetch) + (uri (git-reference + (url "https://github.com/ekalinin/nodeenv") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0y443icx0w7jlzmxmmcm4q8dqfiwgafbb9cp8jpm68mbqxbz40a7")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; This test fails. It tries to open a network socket. + (invoke "pytest" "-vv" "-k" "not test_smoke")))))) + (native-inputs + `(("python-coverage" ,python-coverage) + ("python-mock" ,python-mock) + ("python-pytest" ,python-pytest))) + (home-page "https://ekalinin.github.io/nodeenv/") + (synopsis "Create isolated node.js environments") + (description + "Nodeenv (node.js virtual environment) is a tool to create isolated +node.js environments. It creates an environment that has its own installation +directories, that doesn't share libraries with other node.js virtual +environments.") + (license license:bsd-3))) + +(define-public python-pynamecheap + (package + (name "python-pynamecheap") + (version "0.0.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "PyNamecheap" version)) + (sha256 + (base32 + "0wkbwz208j8nfrsmzmclvxg22ymknn0mlz76wbdza9k2bx2zja6l")))) + (build-system python-build-system) + (propagated-inputs + `(("python-requests" ,python-requests))) + (home-page + "https://github.com/Bemmu/PyNamecheap") + (synopsis + "Namecheap API client in Python") + (description + "PyNamecheap is a Namecheap API client in Python.") + (license license:expat))) + +(define-public python2-pynamecheap + (package-with-python2 python-pynamecheap)) + +(define-public python-dns-lexicon + (package + (name "python-dns-lexicon") + (version "2.4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "dns-lexicon" version)) + (sha256 + (base32 + "0jdn3ns71bsybr7njgsqr9xlxsqh7zh6phn4ld0liazqdn2l5f6m")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ;requires internet access + (propagated-inputs + `(("python-future" ,python-future) + ("python-pynamecheap" ,python-pynamecheap) + ("python-requests" ,python-requests) + ("python-tldextract" ,python-tldextract) + ("python-urllib3" ,python-urllib3))) + (home-page "https://github.com/AnalogJ/lexicon") + (synopsis + "Manipulate DNS records on various DNS providers") + (description + "Lexicon provides a way to manipulate DNS records on multiple DNS +providers in a standardized way. It has a CLI but it can also be used as a +Python library. It was designed to be used in automation, specifically with +Let's Encrypt.") + (license license:expat))) + +(define-public python2-dns-lexicon + (package-with-python2 python-dns-lexicon)) + +(define-public python-cfgv + (package + (name "python-cfgv") + (version "3.1.0") + (source + (origin + ;; There are no tests in the PyPI tarball. + (method git-fetch) + (uri (git-reference + (url "https://github.com/asottile/cfgv") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1vvkkqw92sak4b28bpscpppq483amy52ch2yqy1i2m23q7xjkabx")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest" "-vv")))))) + (native-inputs + `(("python-covdefaults" ,python-covdefaults) + ("python-coverage" ,python-coverage) + ("python-pytest" ,python-pytest))) + (home-page "https://github.com/asottile/cfgv") + (synopsis "Configuration validation library") + (description + "This library helps to validate configuration files and produce human +readable error messages.") + (license license:expat))) + +(define-public python-commandlines + (package + (name "python-commandlines") + (version "0.4.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "commandlines" version)) + (sha256 + (base32 + "0r7xcr0knv02p4mswa2bng61nn8nbhhrs6kvdnb9bb3hhjvm1dl6")))) + (build-system python-build-system) + (home-page "https://github.com/chrissimpkins/commandlines") + (synopsis "Command line argument to object parsing library") + (description + "@code{Commandlines} is a Python library for command line application +development that supports command line argument parsing, command string +validation testing and application logic.") + (license license:expat))) + +;; Make sure to upgrade python-llvmlite in (gnu packages llvm) together with +;; python-numba. They have a very unflexible relationship. +(define-public python-numba + (package + (name "python-numba") + (version "0.46.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "numba" version)) + (sha256 + (base32 + "1vnfzcq6fcnkmdms6114d49awvvj5181fl7z1wlha27qc2paxjy2")))) + (build-system python-build-system) + (arguments + `(#:modules ((guix build utils) + (guix build python-build-system) + (ice-9 ftw) + (srfi srfi-1) + (srfi srfi-26)) + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'disable-proprietary-features + (lambda _ + (setenv "NUMBA_DISABLE_HSA" "1") + (setenv "NUMBA_DISABLE_CUDA" "1") + #t)) + (add-after 'unpack 'remove-failing-tests + (lambda _ + ;; FIXME: These tests fail for unknown reasons: + ;; test_non_writable_pycache, test_non_creatable_pycache, and + ;; test_frozen (all in numba.tests.test_dispatcher.TestCache). + (substitute* "numba/tests/test_dispatcher.py" + (("def test(_non_writable_pycache)" _ m) + (string-append "def guix_skip" m)) + (("def test(_non_creatable_pycache)" _ m) + (string-append "def guix_skip" m)) + (("def test(_frozen)" _ m) + (string-append "def guix_skip" m))) + + ;; These tests fail because we don't run the tests from the build + ;; directory: test_setup_py_distutils, test_setup_py_setuptools + ;; They are in numba.tests.test_pycc.TestDistutilsSupport. + (substitute* "numba/tests/test_pycc.py" + (("def test(_setup_py_distutils|_setup_py_setuptools)" _ m) + (string-append "def guix_skip" m))) + + ;; These tests fail because our version of Python does not have + ;; a recognizable front-end for the Numba distribution to use + ;; to check against. + (substitute* "numba/tests/test_entrypoints.py" + (("def test(_init_entrypoint)" _ m) + (string-append "def guix_skip" m))) + (substitute* "numba/tests/test_jitclasses.py" + (("def test(_jitclass_longlabel_not_truncated)" _ m) + (string-append "def guix_skip" m))) + #t)) + (replace 'check + (lambda _ + (let ((cwd (getcwd))) + (setenv "PYTHONPATH" + (string-append cwd "/build/" + (find (cut string-prefix? "lib" <>) + (scandir (string-append cwd "/build"))) + ":" + (getenv "PYTHONPATH"))) + ;; Something is wrong with the PYTHONPATH when running the + ;; tests from the build directory, as it complains about not being + ;; able to import certain modules. + (with-directory-excursion "/tmp" + (invoke "python3" "-m" "numba.runtests" "-v" "-m"))) + #t))))) + (propagated-inputs + `(("python-llvmlite" ,python-llvmlite) + ("python-numpy" ,python-numpy) + ("python-singledispatch" ,python-singledispatch))) + ;; Needed for tests. + (inputs + `(("python-jinja2" ,python-jinja2) + ("python-pygments" ,python-pygments))) + (home-page "https://numba.pydata.org") + (synopsis "Compile Python code using LLVM") + (description "Numba gives you the power to speed up your applications with +high performance functions written directly in Python. With a few +annotations, array-oriented and math-heavy Python code can be just-in-time +compiled to native machine instructions, similar in performance to C, C++ and +Fortran, without having to switch languages or Python interpreters. + +Numba works by generating optimized machine code using the LLVM compiler +infrastructure at import time, runtime, or statically (using the included pycc +tool).") + (license license:bsd-3))) + +(define-public python-numcodecs + (package + (name "python-numcodecs") + (version "0.6.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "numcodecs" version)) + (sha256 + (base32 + "0kbfr8pl3x9glsypbq8hzim003f16ml1b1cvgrh4w1sdvgal6j7g")))) + (build-system python-build-system) + (propagated-inputs + `(("python-numpy" ,python-numpy) + ("python-msgpack" ,python-msgpack))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-setuptools-scm" ,python-setuptools-scm))) + (home-page "https://github.com/zarr-developers/numcodecs") + (synopsis "Buffer compression and transformation codecs") + (description + "This Python package provides buffer compression and transformation +codecs for use in data storage and communication applications.") + (license license:expat))) + +(define-public python-asciitree + (package + (name "python-asciitree") + (version "0.3.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "asciitree" version)) + (sha256 + (base32 + "0vhgri2m2xlnibhz4xwn4hpbc7xacisxjqrk6k5kyppq96vbk92a")))) + (build-system python-build-system) + (home-page "https://github.com/mbr/asciitree") + (synopsis "Draws ASCII trees") + (description "This package draws tree structures using characters.") + (license license:expat))) + +(define-public python-zarr + (package + (name "python-zarr") + (version "2.4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "zarr" version)) + (sha256 + (base32 + "026n3sjzjv2gmwx6y72b8ij0hk42bc8zdbvfj5gdqzd4i6wj3ajk")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'disable-service-tests + (lambda _ + (setenv "ZARR_TEST_ABS" "0") + (setenv "ZARR_TEST_MONGO" "0") + (setenv "ZARR_TEST_REDIS" "0") + #t)) + (replace 'check + (lambda _ + (invoke "pytest" "-vv" "-k" "not lmdb") + #t))))) + (propagated-inputs + `(("python-asciitree" ,python-asciitree) + ("python-fasteners" ,python-fasteners) + ("python-numcodecs" ,python-numcodecs) + ("python-numpy" ,python-numpy))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-setuptools-scm" ,python-setuptools-scm))) + (home-page "https://github.com/zarr-developers/zarr-python") + (synopsis "Chunked, compressed, N-dimensional arrays for Python") + (description + "This package provides an implementation of chunked, compressed, +N-dimensional arrays for Python.") + (license license:expat))) + +(define-public python-anndata + (package + (name "python-anndata") + (version "0.7.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "anndata" version)) + (sha256 + (base32 + "0rnfbpr55j1a1bi2kd4mz444741hrn74kz90h5rnjr59jmpfnh09")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'delete-inconvenient-tests + (lambda _ + ;; This test depends on python-scikit-learn. + (delete-file "anndata/tests/test_inplace_subset.py") + #t)) + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (invoke "pytest" "-vv")))))) + (propagated-inputs + `(("python-h5py" ,python-h5py) + ("python-importlib-metadata" ,python-importlib-metadata) + ("python-natsort" ,python-natsort) + ("python-numcodecs" ,python-numcodecs) + ("python-packaging" ,python-packaging) + ("python-pandas" ,python-pandas) + ("python-scipy" ,python-scipy) + ("python-zarr" ,python-zarr))) + (native-inputs + `(("python-joblib" ,python-joblib) + ("python-pytest" ,python-pytest) + ("python-setuptools-scm" ,python-setuptools-scm))) + (home-page "https://github.com/theislab/anndata") + (synopsis "Annotated data for data analysis pipelines") + (description "Anndata is a package for simple (functional) high-level APIs +for data analysis pipelines. In this context, it provides an efficient, +scalable way of keeping track of data together with learned annotations and +reduces the code overhead typically encountered when using a mostly +object-oriented library such as @code{scikit-learn}.") + (license license:bsd-3))) + +(define-public python-dill + (package + (name "python-dill") + (version "0.3.1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "dill" version)) + (sha256 + (base32 "1704g8z70d210ksgbccs2v545v9w0wc6lx15m296alb7jf0yzn22")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (with-directory-excursion "/tmp" + (invoke "nosetests" "-v")) + #t))))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://pypi.org/project/dill/") + (synopsis "Serialize all of Python") + (description "Dill extends Python's @code{pickle} module for serializing +and de-serializing Python objects to the majority of the built-in Python +types. Dill provides the user the same interface as the @code{pickle} module, +and also includes some additional features. In addition to pickling Python +objects, @code{dill} provides the ability to save the state of an interpreter +session in a single command. Hence, it would be feasible to save a +interpreter session, close the interpreter, ship the pickled file to another +computer, open a new interpreter, unpickle the session and thus continue from +the saved state of the original interpreter session.") + (license license:bsd-3))) + +(define-public python-multiprocess + (package + (name "python-multiprocess") + (version "0.70.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri "multiprocess" version)) + (sha256 + (base32 + "1r882nvd44xqwbrclwqx5rhs80l6809rcvpc7pkpgnij06cvvmcz")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'disable-broken-tests + (lambda _ + ;; This test is broken as there is no keyboard interrupt. + (substitute* "py3.7/multiprocess/tests/__init__.py" + (("^(.*)def test_wait_result" + line indent) + (string-append indent + "@unittest.skip(\"Disabled by Guix\")\n" + line))) + #t)) + ;; Tests must be run after installation. + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (invoke "python" "-m" "multiprocess.tests") + #t))))) + (propagated-inputs + `(("python-dill" ,python-dill))) + (home-page "https://pypi.org/project/multiprocess/") + (synopsis "Multiprocessing and multithreading in Python") + (description + "This package is a fork of the multiprocessing Python package, a package +which supports the spawning of processes using the API of the standard +library's @code{threading} module.") + (license license:bsd-3))) + +(define-public python-toolz + (package + (name "python-toolz") + (version "0.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "toolz" version)) + (sha256 + (base32 + "1j9i7fdjnx9dz35fdj5gvgxx6585ja9sxgaiv65if77nlxz0m7wj")))) + (build-system python-build-system) + ;; FIXME: tests cannot be computed: "Can't perform this operation for + ;; unregistered loader type" + (arguments '(#:tests? #f)) + (home-page "https://github.com/pytoolz/toolz/") + (synopsis "List processing tools and functional utilities") + (description + "This package provides a set of utility functions for iterators, +functions, and dictionaries.") + (license license:bsd-3))) + +(define-public python2-toolz + (package-with-python2 python-toolz)) + +(define-public python-cytoolz + (package + (name "python-cytoolz") + (version "0.9.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cytoolz" version)) + (sha256 + (base32 + "1r80p88hm3f3r4zpixzr047y5hw4bzy41m4xywnhycda83x0dk44")))) + (build-system python-build-system) + ;; FIXME: tests fail with "module 'cytoolz.curried' has no attribute + ;; 'exceptions'" + (arguments '(#:tests? #f)) + (propagated-inputs + `(("python-toolz" ,python-toolz))) + (native-inputs + `(("python-cython" ,python-cython))) + (home-page "https://github.com/pytoolz/cytoolz") + (synopsis "High performance functional utilities") + (description + "The cytoolz package implements the same API as provided by toolz. The +main differences are that @code{cytoolz} is faster and cytoolz offers a C API +that is accessible to other projects developed in Cython.") + (license license:bsd-3))) + +(define-public python-sortedcontainers + (package + (name "python-sortedcontainers") + (version "2.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "sortedcontainers" version)) + (sha256 + (base32 + "0fm0w5id2yhqld95hg2m636vjgkz377rvgdfqaxc25vbylr9lklp")))) + (build-system python-build-system) + (arguments + ;; FIXME: Tests require many extra dependencies, and would introduce + ;; a circular dependency on hypothesis, which uses this package. + '(#:tests? #f)) + (propagated-inputs + `(("python-appdirs" ,python-appdirs) + ("python-distlib" ,python-distlib) + ("python-filelock" ,python-filelock) + ("python-six" ,python-six-bootstrap))) + (home-page "http://www.grantjenks.com/docs/sortedcontainers/") + (synopsis "Sorted List, Sorted Dict, Sorted Set") + (description + "This package provides a sorted collections library, written in +pure-Python.") + (license license:asl2.0))) + +(define-public python2-sortedcontainers + (package-with-python2 python-sortedcontainers)) + +(define-public python-cloudpickle + (package + (name "python-cloudpickle") + (version "1.3.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cloudpickle" version)) + (sha256 + (base32 + "0lx7gy9clp427qwcm7b23zdsldpr03gy3vxxhyi8fpbhwz859brq")))) + (build-system python-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (add-before 'check 'do-not-override-PYTHONPATH + (lambda _ + ;; Append to PYTHONPATH instead of overriding it so + ;; that dependencies from Guix can be found. + (substitute* "tests/testutils.py" + (("env\\['PYTHONPATH'\\] = pythonpath") + "env['PYTHONPATH'] += os.pathsep + pythonpath")) + #t)) + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (if tests? + (invoke "pytest" "-s" "-vv") + (format #t "test suite not run~%")) + #t))))) + (native-inputs + `(;; For tests. + ("python-psutil" ,python-psutil) + ("python-pytest" ,python-pytest) + ("python-tornado" ,python-tornado))) + (home-page "https://github.com/cloudpipe/cloudpickle") + (synopsis "Extended pickling support for Python objects") + (description + "Cloudpickle makes it possible to serialize Python constructs not +supported by the default pickle module from the Python standard library. It +is especially useful for cluster computing where Python expressions are +shipped over the network to execute on remote hosts, possibly close to the +data.") + (properties `((python2-variant . ,(delay python2-cloudpickle)))) + (license license:bsd-3))) + +(define-public python2-cloudpickle + (let ((base (package-with-python2 (strip-python2-variant python-cloudpickle)))) + (package + (inherit base) + (native-inputs + `(("python-mock" ,python2-mock) + ,@(package-native-inputs base))) + (propagated-inputs + `(("python-futures" ,python2-futures) + ,@(package-propagated-inputs base)))))) + +(define-public python-locket + (package + (name "python-locket") + (version "0.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "locket" version)) + (sha256 + (base32 + "1d4z2zngrpqkrfhnd4yhysh66kjn4mblys2l06sh5dix2p0n7vhz")))) + (build-system python-build-system) + (home-page "https://github.com/mwilliamson/locket.py") + (synopsis "File-based locks for Python") + (description + "Locket implements a lock that can be used by multiple processes provided +they use the same path.") + (license license:bsd-2))) + +(define-public python2-locket + (package-with-python2 python-locket)) + +(define-public python-blosc + (package + (name "python-blosc") + (version "1.5.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "blosc" version)) + (sha256 + (base32 + "1cm91c6r431yla2mbs4895bgiianjf30dfz14vvv99dslygd65jw")))) + (build-system python-build-system) + ;; FIXME: all tests pass, but then this error is printed: + ;; TypeError: calling returned None, not a test + (arguments '(#:tests? #f)) + (propagated-inputs + `(("python-numpy" ,python-numpy))) + (home-page "https://github.com/blosc/python-blosc") + (synopsis "Python wrapper for the Blosc data compressor library") + (description "Blosc is a high performance compressor optimized for binary +data. It has been designed to transmit data to the processor cache faster +than the traditional, non-compressed, direct memory fetch approach via a +@code{memcpy()} system call. + +Blosc works well for compressing numerical arrays that contains data with +relatively low entropy, like sparse data, time series, grids with +regular-spaced values, etc. + +This Python package wraps the Blosc library.") + (license license:bsd-3))) + +(define-public python2-blosc + (package-with-python2 python-blosc)) + +(define-public python-partd + (package + (name "python-partd") + (version "0.3.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri "partd" version)) + (sha256 + (base32 + "0sz6rwlnl4fqq220pyz863cnv0gjdxl4m7lscl71ishl5z0xkmhz")))) + (build-system python-build-system) + (propagated-inputs + `(("python-blosc" ,python-blosc) + ("python-locket" ,python-locket) + ("python-numpy" ,python-numpy) + ("python-pandas" ,python-pandas) + ("python-pyzmq" ,python-pyzmq) + ("python-toolz" ,python-toolz))) + (home-page "https://github.com/dask/partd/") + (synopsis "Appendable key-value storage") + (description "Partd stores key-value pairs. Values are raw bytes. We +append on old values. Partd excels at shuffling operations.") + (license license:bsd-3))) + +(define-public python2-partd + (package-with-python2 python-partd)) + +(define-public python-fsspec + (package + (name "python-fsspec") + (version "0.6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "fsspec" version)) + (sha256 + (base32 + "1g9ba8v04s1nrh7pvzfm2md7ivl2mrz3hcq3y9d1a44gd62h17zj")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; there are none + (home-page "https://github.com/intake/filesystem_spec") + (synopsis "File-system specification") + (description "The purpose of this package is to produce a template or +specification for a file-system interface, that specific implementations +should follow, so that applications making use of them can rely on a common +behavior and not have to worry about the specific internal implementation +decisions with any given backend.") + (license license:bsd-3))) + +(define-public python-dask + (package + (name "python-dask") + (version "2.14.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "dask" version)) + (sha256 + (base32 "031j0j26s0675v0isyps2dphm03330n7dy8ifdy70jgvf78d119q")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'disable-broken-tests + (lambda _ + ;; This test is marked as xfail when pytest-xdist is used. + (substitute* "dask/tests/test_threaded.py" + (("def test_interrupt\\(\\)" m) + (string-append "@pytest.mark.skip(reason=\"Disabled by Guix\")\n" + m))) + ;; This one fails with a type error: + ;; TypeError: Already tz-aware, use tz_convert to convert. + (substitute* "dask/dataframe/tests/test_shuffle.py" + (("def test_set_index_timestamp\\(\\)" m) + (string-append "@pytest.mark.skip(reason=\"Disabled by Guix\")\n" + m))) + #t)) + (replace 'check + (lambda _ (invoke "pytest" "-vv")))))) + (propagated-inputs + `(("python-cloudpickle" ,python-cloudpickle) + ("python-fsspec" ,python-fsspec) + ("python-numpy" ,python-numpy) + ("python-packaging" ,python-packaging) + ("python-pandas" ,python-pandas) + ("python-partd" ,python-partd) + ("python-toolz" ,python-toolz) + ("python-pyyaml" ,python-pyyaml))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner))) + (home-page "https://github.com/dask/dask/") + (synopsis "Parallel computing with task scheduling") + (description + "Dask is a flexible parallel computing library for analytics. It +consists of two components: dynamic task scheduling optimized for computation, +and large data collections like parallel arrays, dataframes, and lists that +extend common interfaces like NumPy, Pandas, or Python iterators to +larger-than-memory or distributed environments. These parallel collections +run on top of the dynamic task schedulers. ") + (license license:bsd-3))) + +(define-public python-ilinkedlist + (package + (name "python-ilinkedlist") + (version "0.4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ilinkedlist" version)) + (sha256 + (base32 + "0nrw4sr3afldrp7073hvc0rgdz282s0l819jdmj1i6nn05v33h0l")))) + (build-system python-build-system) + (native-inputs `(("python-pytest" ,python-pytest))) + (inputs `(("python" ,python))) + (home-page "https://github.com/luther9/ilinkedlist-py") + (synopsis "Immutable linked list library") + (description + "This is a implementation of immutable linked lists for Python. It +contains @code{nil} (the empty linked list) and a @code{Pair} class for nodes. +Since a linked list is treated as immutable, it is hashable, and its length +can be retrieved in constant time. Some of the terminology is inspired by +LISP. It is possible to create an improper list by creating a @code{Pair} +with a non-list @code{cdr}.") + (license license:gpl3+))) + +(define-public python-readlike + (package + (name "python-readlike") + (version "0.1.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "readlike" version)) + (sha256 + (base32 "027w8fvi50ksl57q0a7kb5zvmq8jxaawnviib1jdqw0p3igvm1j4")))) + (build-system python-build-system) + (home-page "https://github.com/jangler/readlike") + (synopsis "GNU Readline-like line editing module") + (description + "This Python module provides line editing functions similar to the default +Emacs-style ones of GNU Readline. Unlike the Python standard library's +@code{readline} package, this one allows access to those capabilties in settings +outside of a standard command-line interface. It is especially well-suited to +interfacing with Urwid, due to a shared syntax for describing key inputs. + +Currently, all stateless Readline commands are implemented. Yanking and history +are not supported.") + (license license:expat))) + +(define-public python2-readlike + (package-with-python2 python-readlike)) + +(define-public python-reparser + (package + (name "python-reparser") + (version "1.4.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ReParser" version)) + (sha256 + (base32 "0nniqb69xr0fv7ydlmrr877wyyjb61nlayka7xr08vlxl9caz776")))) + (build-system python-build-system) + (home-page "https://github.com/xmikos/reparser") + (synopsis "Simple lexer/parser for inline markup based on regular expressions") + (description + "This Python library provides a simple lexer/parser for inline markup based +on regular expressions.") + (license license:expat))) + +(define-public python2-reparser + (let ((reparser (package-with-python2 + (strip-python2-variant python-reparser)))) + (package (inherit reparser) + (propagated-inputs + `(("python2-enum34" ,python2-enum34) + ,@(package-propagated-inputs reparser)))))) + +(define-public python-retrying + (package + (name "python-retrying") + (version "1.3.3") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/rholder/retrying") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1kqipkbdaw5s1xg0gi29awm03vp1x8dz24pjidgxagvkvrjpzhi7")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six))) + (home-page "https://github.com/rholder/retrying") + (synopsis "Library for adding retry behavior") + (description "Retrying is a general-purpose retrying library to simplify +the task of adding retry behavior to just about anything. + +Features: + +@itemize +@item Generic Decorator API. +@item Specify stop condition (i.e. limit by number of attempts). +@item Specify wait condition (i.e. exponential backoff sleeping between attempts). +@item Customize retrying on Exceptions. +@item Customize retrying on expected returned result. +@end itemize") + (license license:asl2.0))) + +(define-public python-precis-i18n + (package + (name "python-precis-i18n") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "precis_i18n" version)) + (sha256 + (base32 + "0gjhvwd8aifx94rl1ag08vlmndyx2q3fkyqb0c4i46x3p2bc2yi2")))) + (build-system python-build-system) + (home-page "https://github.com/byllyfish/precis_i18n") + (synopsis "Implementation of the PRECIS framework") + (description + "This module implements the PRECIS Framework as described in RFC 8264, +RFC 8265 and RFC 8266.") + (license license:expat))) + +(define-public python-absl-py + (package + (name "python-absl-py") + (version "0.6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "absl-py" version)) + (sha256 + (base32 + "1mp9lk0b2qa37b7y6ak4lvf6ifw2ylyy6bkf9ik77md3j4xrwlc7")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six))) + (home-page "https://github.com/abseil/abseil-py") + (synopsis "Abseil Python common libraries") + (description + "This package provides the Abseil Python Common Libraries, a collection +of Python libraries for building Python applications.") + (license license:asl2.0))) + +(define-public python-astor + (package + (name "python-astor") + (version "0.7.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "astor" version)) + (sha256 + (base32 + "13gv6f2xz9i564byp21gcpc0l3w4cs23k1wbcam8kky2ls3hvhwm")))) + (build-system python-build-system) + ;; FIXME: There are two errors and two test failures. + (arguments `(#:tests? #f)) + (home-page "https://github.com/berkerpeksag/astor") + (synopsis "Read and write Python ASTs") + (description "Astor is designed to allow easy manipulation of Python +source via the Abstract Syntax Tree.") + (license license:bsd-3))) + +(define-public python2-astor + (package-with-python2 python-astor)) + +(define-public python-astunparse + (package + (name "python-astunparse") + (version "1.6.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "astunparse" version)) + (sha256 + (base32 "0rzbc44xcvzjhhiy7wac96mgal5mcjz1mfq8rmvgswskf4kf9cys")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; there are none + (propagated-inputs + `(("python-six" ,python-six) + ("python-wheel" ,python-wheel))) + (home-page "https://github.com/simonpercivall/astunparse") + (synopsis "AST unparser for Python") + (description "This package provides an AST unparser for Python. It is a +factored out version of @code{unparse} found in the Python source +distribution.") + (license license:bsd-3))) + +(define-public python-gast + (package + (name "python-gast") + (version "0.3.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "gast" version)) + (sha256 + (base32 "0mrvvfzqafj1wzd0xxfmjf4vphnlxypbhpic1m283aj9i8lfz0dq")))) + (build-system python-build-system) + (propagated-inputs + `(("python-astunparse" ,python-astunparse))) + (home-page "https://pypi.org/project/gast/") + (synopsis "Generic Python AST that abstracts the underlying Python version") + (description + "GAST provides a compatibility layer between the AST of various Python +versions, as produced by @code{ast.parse} from the standard @code{ast} +module.") + (license license:bsd-3))) + +(define-public python-wikidata + (package + (name "python-wikidata") + (version "0.6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Wikidata" version)) + (sha256 + (base32 + "08nlnydddfp1jj0cdmshvld1irzngbp3dij928wqsg9ziklm6mw9")))) + (build-system python-build-system) + (propagated-inputs + `(("python-babel" ,python-babel))) + (home-page "https://github.com/dahlia/wikidata") + (synopsis "Wikidata client library") + (description + "This package provides a Python interface to +@url{https://www.wikidata.org/, Wikidata}.") + (properties '((upstream-name . "Wikidata"))) + (license license:gpl3+))) + +(define-public python-doctest-ignore-unicode + (package + (name "python-doctest-ignore-unicode") + (version "0.1.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "doctest-ignore-unicode" version)) + (sha256 + (base32 + "1m9aa4qnyj21lbq4sbvmv1vcz7zksss4rz37ddf2hxv4hk8b547w")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/gnublade/doctest-ignore-unicode") + (synopsis "Ignore Unicode literal prefixes in doctests") + (description + "This package adds support for a flag to ignore Unicode literal prefixes +in doctests.") + (license license:asl2.0))) + +(define-public python-attr + (package + (name "python-attr") + (version "0.3.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "attr" version)) + (sha256 + (base32 + "0pbpskvxp5hzdvcaf766ljwpckshir8sf7z6jqji6zyib20594ch")))) + (build-system python-build-system) + (home-page "https://github.com/denis-ryzhkov/attr") + (synopsis "Decorator for attributes of target function or class") + (description "Simple decorator to set attributes of target function or +class in a @acronym{DRY, Don't Repeat Yourself} way.") + (license license:expat))) + +(define-public python-construct + (package + (name "python-construct") + (version "2.10.56") + (source + (origin + (method url-fetch) + (uri (pypi-uri "construct" version)) + (sha256 + (base32 + "0q86jjzsvy835h3c8pjj4619vbp7ihfg8njmyw86ym4qrpni7flp")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ; No tests exist. + (propagated-inputs + `(("python-extras" ,python-extras) + ("python-arrow" ,python-arrow) + ("python-numpy" ,python-numpy) + ("python-ruamel.yaml" ,python-ruamel.yaml))) + (home-page "https://construct.readthedocs.io") + (synopsis "Declarative and symmetrical parser and builder for binary data") + (description + "This package provides both simple, atomic constructs (such as +integers of various sizes), as well as composite ones which allow you +form hierarchical and sequential structures of increasing complexity. +It features bit and byte granularity, easy debugging and testing, an +easy-to-extend subclass system, and lots of primitive constructs to +make your work easier.") + (license license:expat))) + +(define-public python-humanize + (package + (name "python-humanize") + (version "0.5.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "humanize" version)) + (sha256 + (base32 + "06dvhm3k8lf2rayn1gxbd46y0fy1db26m3h9vrq7rb1ib08mfgx4")))) + (arguments + '(#:tests? #f)) ; tests not in pypi archive + (build-system python-build-system) + (home-page "https://github.com/jmoiron/humanize") + (synopsis "Print numerical information in a human-readable form") + (description "This package provides a Python module that displays numbers +and dates in \"human readable\" forms. For example, it would display +\"12345591313\" as \"12.3 billion\".") + (license license:expat))) + +(define-public python-txaio + (package + (name "python-txaio") + (version "18.8.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "txaio" version)) + (sha256 + (base32 + "1zmpdph6zddgrnkkcykh6qk5s46l7s5mzfqrh82m4b5iffn61qv7")))) + (build-system python-build-system) + (propagated-inputs + `(("python-twisted" ,python-twisted) + ("python-six" ,python-six))) + (home-page "https://github.com/crossbario/txaio") + (synopsis "Compatibility layer between Python asyncio and Twisted") + (description "Txaio provides a compatibility layer between the Python +@code{asyncio} module and @code{Twisted}.") + (license license:expat))) + +(define-public python-toolshed + (package + (name "python-toolshed") + (version "0.4.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "toolshed" version)) + (sha256 + (base32 + "14zvz51gzf9i1i3d1sj363ba4rksl6lcf4lz1arl8hpqgcbir8r3")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/brentp/toolshed/") + (synopsis "Collection of modules and functions for working with data") + (description "This is a collection of well-tested, simple modules and +functions that aim to reduce boilerplate when working with data.") + (license license:bsd-2))) + +(define-public python-annoy + (package + (name "python-annoy") + (version "1.15.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "annoy" version)) + (sha256 + (base32 + "1rxn6snn0r32r07g45hdjhh8aa1xzx6fjrm8g62d8vzp46z7rzrp")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/spotify/annoy/") + (synopsis "Approximate nearest neighbors library") + (description + "Annoy is a C++ library with Python bindings to search for points in +space that are close to a given query point. It also creates large read-only +file-based data structures that are @code{mmap}ped into memory so that many +processes may share the same data.") + (license license:asl2.0))) + +(define-public python-pylzma + (package + (name "python-pylzma") + (version "0.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pylzma" version)) + (sha256 + (base32 + "074anvhyjgsv2iby2ql1ixfvjgmhnvcwjbdz8gk70xzkzcm1fx5q")))) + (build-system python-build-system) + (home-page "http://www.joachim-bauch.de/projects/pylzma/") + (synopsis "Python bindings for the LZMA library by Igor Pavlov.") + (description "This package provides Python bindings for the LZMA library +by Igor Pavlov.") + (license license:lgpl2.1+))) + +(define-public python2-pylzma + (package-with-python2 python-pylzma)) + +(define-public python2-zeroconf + (package + (name "python2-zeroconf") + + ;; This is the last version that supports Python 2.x. + (version "0.19.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "zeroconf" version)) + (sha256 + (base32 + "0ykzg730n915qbrq9bn5pn06bv6rb5zawal4sqjyfnjjm66snkj3")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2 + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-requires + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "setup.py" + (("enum-compat") + "enum34")) + #t))))) + (native-inputs + `(("python2-six" ,python2-six) + ("python2-enum32" ,python2-enum34) + ("python2-netifaces" ,python2-netifaces) + ("python2-typing" ,python2-typing))) + (home-page "https://github.com/jstasiak/python-zeroconf") + (synopsis "Pure Python mDNS service discovery") + (description + "Pure Python multicast DNS (mDNS) service discovery library (Bonjour/Avahi +compatible).") + (license license:lgpl2.1+))) + +(define-public python-bsddb3 + (package + (name "python-bsddb3") + (version "6.2.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "bsddb3" version)) + (sha256 + (base32 + "019db2y6bfmiqbrgg9x9f6h72qjmqh05czdn2v5sy9bl0gs23mj2")))) + (build-system python-build-system) + (inputs + `(("bdb" ,bdb))) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'configure-locations + (lambda* (#:key inputs #:allow-other-keys) + (setenv "BERKELEYDB_DIR" (assoc-ref inputs "bdb")) + (setenv "YES_I_HAVE_THE_RIGHT_TO_USE_THIS_BERKELEY_DB_VERSION" "1") + #t)) + (replace 'check + (lambda _ + (invoke "python3" "test3.py" "-v")))))) + (home-page "https://www.jcea.es/programacion/pybsddb.htm") + (synopsis "Python bindings for Oracle Berkeley DB") + (description + "This module provides a nearly complete wrapping of the Oracle/Sleepycat +C API for the Database Environment, Database, Cursor, Log Cursor, Sequence and +Transaction objects, and each of these is exposed as a Python type in the +bsddb3.db module. The database objects can use various access methods: btree, +hash, recno, and queue. Complete support of Berkeley DB distributed +transactions. Complete support for Berkeley DB Replication Manager. +Complete support for Berkeley DB Base Replication. Support for RPC.") + (license license:bsd-3))) + +(define-public python-dbfread + (package + (name "python-dbfread") + (version "2.0.7") + (source (origin + (method url-fetch) + (uri (pypi-uri "dbfread" version)) + (sha256 + (base32 + "0gdpwdzf1fngsi6jrdyj4qdf6cr7gnnr3zp80dpkzbgz0spskj07")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://dbfread.readthedocs.io") + (synopsis "Read DBF Files with Python") + (description + "This library reads DBF files and returns the data as native Python data +types for further processing. It is primarily intended for batch jobs and +one-off scripts.") + (license license:expat))) + +(define-public python-cached-property + (package + (name "python-cached-property") + (version "1.5.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cached-property" version)) + (sha256 + (base32 + "010m1bl380l2r3vwq24r5v14l6gwvgm9v0mqqjkjss552jgsa5wj")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; https://github.com/pydanny/cached-property/issues/131 + ;; recent versions of freezegun break one test + (add-after 'unpack 'disable-broken-test + (lambda _ + (substitute* "tests/test_cached_property.py" + (("def test_threads_ttl_expiry\\(self\\)" m) + (string-append "@unittest.skip(\"Disabled by Guix\")\n" + " " m))) + #t))))) + (native-inputs + `(("python-freezegun" ,python-freezegun))) + (home-page + "https://github.com/pydanny/cached-property") + (synopsis + "Decorator for caching properties in classes") + (description + "This package provides a decorator which makes caching +time-or-computationally-expensive properties quick and easy and works in Python +2 or 3.") + (license license:bsd-3))) + +(define-public python-folium + (package + (name "python-folium") + (version "0.11.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "folium" version)) + (sha256 + (base32 "19sclsq3xcjfa7bavzjpyn6rl9b15jbc76n5aag4cwhqqamqj1sl")))) + (build-system python-build-system) + (propagated-inputs + `(("python-branca" ,python-branca) + ("python-jinja2" ,python-jinja2) + ("python-numpy" ,python-numpy) + ("python-requests" ,python-requests))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/python-visualization/folium") + (synopsis "Make beautiful maps with Leaflet.js & Python") + (description "@code{folium} makes it easy to visualize data that’s been +manipulated in Python on an interactive leaflet map. It enables both the +binding of data to a map for @code{choropleth} visualizations as well as +passing rich vector/raster/HTML visualizations as markers on the map. + +The library has a number of built-in tilesets from OpenStreetMap, Mapbox, and +Stamen, and supports custom tilesets with Mapbox or Cloudmade API keys. It +supports Image, Video, GeoJSON and TopoJSON overlays.") + (license license:expat))) + +(define-public jube + (package + ;; This is a command-line tool, so no "python-" prefix. + (name "jube") + (version "2.2.2") + (source (origin + (method url-fetch) + (uri (string-append + "http://apps.fz-juelich.de/jsc/jube/jube2/download.php?version=" + version)) + (sha256 + (base32 + "0xq4k1q63s1p6swgyp61vahlrd1fqmgbm0gm5kpj8ikwy0yc0nqk")) + (file-name (string-append "jube-" version ".tar.gz")))) + (build-system python-build-system) + (home-page "https://apps.fz-juelich.de/jsc/jube/jube2/docu/index.html") + (synopsis "Benchmarking environment") + (description + "JUBE helps perform and analyze benchmarks in a systematic way. For each +benchmarked application, benchmark data is stored in a format that allows JUBE +to deduct the desired information. This data can be parsed by automatic pre- +and post-processing scripts that draw information and store it more densely +for manual interpretation.") + (license license:gpl3+))) + +(define-public python-pyroutelib3 + (package + (name "python-pyroutelib3") + (version "1.3.post1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyroutelib3" version)) + (sha256 + (base32 + "1hpbydpn2alyswiajfbvhzq4c7f36vdmvxy91hgv8l1lb2g2vfrj")))) + (build-system python-build-system) + (propagated-inputs + `(("python-dateutil" ,python-dateutil))) + (home-page "https://github.com/MKuranowski/pyroutelib3") + (synopsis "Library for simple routing on OSM data") + (description "Library for simple routing on OSM data") + (license license:gpl3+))) + +(define-public python-bibtexparser + (package + (name "python-bibtexparser") + (version "1.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "bibtexparser" version)) + (sha256 + (base32 + "0zwhfkrzf3n5847dbnfng92k7ak199l9v6x6ax3dgdidfpm6d2fz")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pyparsing" ,python-pyparsing))) + (native-inputs + `(("python-future" ,python-future))) + (home-page "https://github.com/sciunto-org/python-bibtexparser") + (synopsis "Python library to parse BibTeX files") + (description "BibtexParser is a Python library to parse BibTeX files.") + (license (list license:bsd-3 license:lgpl3)))) + +(define-public python-distro + (package + (name "python-distro") + (version "1.4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "distro" version)) + (sha256 + (base32 + "0mrg75w4ap7mdzyga75yaid9n8bgb345ih5mwjp3plj6v1jxwb9n")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/nir0s/distro") + (synopsis + "OS platform information API") + (description + "@code{distro} provides information about the OS distribution it runs on, +such as a reliable machine-readable ID, or version information. + +It is the recommended replacement for Python's original +`platform.linux_distribution` function (which will be removed in Python 3.8). +@code{distro} also provides a command-line interface to output the platform +information in various formats.") + (license license:asl2.0))) + +(define-public python-cairosvg + (package + (name "python-cairosvg") + (version "2.4.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "CairoSVG" version)) + (sha256 + (base32 "1bb7irxbaxxb9ahm3z5wsx1q96mm5gzskc7b6q07h9ikcnb8yrjf")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (invoke "pytest")))))) + (propagated-inputs + `(("python-cairocffi" ,python-cairocffi) + ("python-cssselect2" ,python-cssselect2) + ("python-defusedxml" ,python-defusedxml) + ("python-pillow" ,python-pillow) + ("python-tinycss2" ,python-tinycss2))) + (native-inputs + `(("python-pytest-flake8" ,python-pytest-flake8) + ("python-pytest-isort" ,python-pytest-isort) + ("python-pytest-runner" ,python-pytest-runner))) + (home-page "https://cairosvg.org/") + (synopsis "SVG to PDF/PS/PNG converter based on Cairo") + (description "CairoSVG is a SVG converter based on Cairo. It can export +SVG files to PDF, PostScript and PNG files. The main part of CairoSVG is a +SVG parser, trying to follow the SVG 1.1 recommendation from the W3C. Once +parsed, the result is drawn to a Cairo surface that can be exported to +qvarious formats: PDF, PostScript, PNG and even SVG.") + (license license:lgpl3+))) + +(define-public python-pyphen + (package + (name "python-pyphen") + (version "0.9.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Pyphen" version)) + (sha256 + (base32 "08c9y69ry9d6m4zalhnalg86lsp9v2j5n1ziw5vxfmiihx83lqrv")))) + (build-system python-build-system) + ;; TODO: Use the Guix system hyphenation packages hyphen-* rather than the + ;; embedded set provided by upstream - like Debian does. + (home-page "https://github.com/Kozea/Pyphen") + (synopsis "Pure Python module to hyphenate text") + (description "Pyphen is a pure Python module to hyphenate text using +existing Hunspell hyphenation dictionaries.") + (license (list license:gpl2 license:lgpl2.1 license:mpl1.1)))) + +(define-public python-intelhex + (package + (name "python-intelhex") + (version "2.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "intelhex" version)) + (sha256 + (base32 + "0ckqjbxd8gwcg98gfzpn4vq1qxzfvq3rdbrr1hikj1nmw08qb780")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ;issue with version + (home-page "https://pypi.org/project/IntelHex/") + (synopsis "Python library for Intel HEX files manipulations") + (description "The Intel HEX file format is widely used in microprocessors +and microcontrollers area (embedded systems etc.) as the de facto standard for +representation of code to be programmed into microelectronic devices. This +package provides an intelhex Python library to read, write, create from +scratch and manipulate data from Intel HEX file format. It also includes +several convenience Python scripts, including \"classic\" hex2bin and bin2hex +converters and more, those based on the library itself.") + (license license:bsd-3))) + +(define-public python-pykwalify + (package + (name "python-pykwalify") + (version "1.7.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pykwalify" version)) + (sha256 + (base32 + "1cnfzkg1b01f825ikpw2fhjclf9c8akxjfrbd1vc22x1lg2kk2vy")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ;missing dependencies + (propagated-inputs + `(("python-dateutil" ,python-dateutil) + ("python-docopt" ,python-docopt) + ("python-pyyaml" ,python-pyyaml))) + (home-page "https://github.com/grokzen/pykwalify") + (synopsis + "Python lib/cli for JSON/YAML schema validation") + (description + "This package provides a parser, schema validator, and data binding tool +for YAML and JSON.") + (license license:expat))) + +(define-public python-virtualenv-clone + (package + (name "python-virtualenv-clone") + (version "0.5.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "virtualenv-clone" version)) + (sha256 + (base32 + "0mq54afkkz23q4fwv6rnx7c62913r7d0q9iza6i7w20vl5qy32n8")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-tox" ,python-tox))) + (home-page + "https://github.com/edwardgeorge/virtualenv-clone") + (synopsis "script to clone virtualenvs.") + (description "script to clone virtualenvs.") + (license license:expat))) + +(define-public python-arpeggio + (package + (name "python-arpeggio") + (version "1.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Arpeggio" version)) + (sha256 + (base32 + "0cl7mpdfgjjr5n0523jsd11z2kb3vd17xa1g95cdaqb6yy28n9d5")))) + (build-system python-build-system) + (home-page + "https://github.com/textX/Arpeggio") + (synopsis "Packrat parser interpreter") + (description "Packrat parser interpreter") + (license license:expat))) + +(define-public python-ordereddict + (package + (name "python-ordereddict") + (version "1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ordereddict" version)) + (sha256 + (base32 + "07qvy11nvgxpzarrni3wrww3vpc9yafgi2bch4j2vvvc42nb8d8w")))) + (build-system python-build-system) + (home-page "UNKNOWN") + (synopsis + "A drop-in substitute for Py2.7's new collections.OrderedDict that works in Python 2.4-2.6.") + (description + "A drop-in substitute for Py2.7's new collections.OrderedDict that works in Python 2.4-2.6.") + (license license:expat))) + +(define-public python-parver + (package + (name "python-parver") + (version "0.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "parver" version)) + (sha256 + (base32 + "0jzyylcmjxb0agc4fpdnzdnv2ajvp99rs9pz7qcklnhlmy8scdqv")))) + (build-system python-build-system) + (native-inputs + `(("python-six" ,python-six) + ("python-attrs" ,python-attrs) + ("python-arpeggio" ,python-arpeggio) + ("python-pytest" ,python-pytest) + ("python-hypothesis" ,python-hypothesis) + ("python-pretend" ,python-pretend))) + (home-page "https://github.com/RazerM/parver") + (synopsis + "Parse and manipulate version numbers") + (description + "Parse and manipulate version numbers.") + (license license:expat))) + +(define-public python-pipenv + (package + (name "python-pipenv") + (version "2018.11.26") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pipenv" version)) + (sha256 + (base32 + "0ip8zsrwmhrankrix0shig9g8q2knmr7b63sh7lqa8a5x03fcwx6")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-arpeggio" ,python-arpeggio))) + (propagated-inputs + `(("python-certifi" ,python-certifi) + ("python-invoke" ,python-invoke) + ("python-parver" ,python-parver) + ("python-ordereddict" ,python-ordereddict) + ("python-requests" ,python-requests) + ("python-virtualenv" ,python-virtualenv) + ("python-virtualenv-clone" ,python-virtualenv-clone))) + (arguments + ;; FIXME: Tests currently fail due to an issue with python-typing and the + ;; built in typing in pythong 3.7 + '(#:tests? #f)) + (home-page "https://github.com/pypa/pipenv") + (synopsis + "Python Development Workflow for Humans") + (description + "Python Development Workflow for Humans.") + (license license:expat))) + +(define-public python-dbusmock + (package + (name "python-dbusmock") + (version "0.18.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-dbusmock" version)) + (sha256 + (base32 + "0hp2kyac88nh9iv6l8hlmv7s1sa1s5f1a3wc2pmlmmxnd211fjlr")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-shell-path + (lambda _ + (substitute* "tests/test_code.py" + (("/bin/bash") (which "bash"))) + #t))))) + (native-inputs + `(;; For tests. + ("dbus" ,dbus) ; for dbus-daemon + ("python-nose" ,python-nose) + ("which" ,which))) + (propagated-inputs + `(("python-dbus" ,python-dbus) + ("python-pygobject" ,python-pygobject))) + (home-page "https://github.com/martinpitt/python-dbusmock") + (synopsis "Python library for mock D-Bus objects") + (description "python-dbusmock allows for the easy creation of mock objects on +D-Bus. This is useful for writing tests for software which talks to D-Bus +services such as upower, systemd, logind, gnome-session or others, and it is +hard (or impossible without root privileges) to set the state of the real +services to what you expect in your tests.") + (license license:lgpl3+))) + +(define-public python-ujson + (package + (name "python-ujson") + (version "2.0.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ujson" version)) + (sha256 + (base32 + "18z9gb9ggy1r464b9q1gqs078mqgrkj6dys5a47529rqk3yfybdx")) + (modules '((guix build utils))) + (snippet + '(begin (delete-file-recursively "deps") #t)))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'link-to-system-double-conversion + (lambda* (#:key inputs #:allow-other-keys) + (let ((d-c (assoc-ref inputs "double-conversion"))) + (substitute* "setup.py" + (("./deps/double-conversion/double-conversion\"") + (string-append d-c "/include/double-conversion\"")) + (("-lstdc++" stdc) + (string-append "-L" d-c "/lib\"," + " \"-ldouble-conversion\"," + " \"" stdc))) + #t))) + (replace 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (invoke "pytest")))))) + (native-inputs + `(("double-conversion" ,double-conversion) + ("python-setuptools-scm" ,python-setuptools-scm) + ("python-pytest" ,python-pytest))) + (home-page "https://github.com/ultrajson/ultrajson") + (synopsis "Ultra fast JSON encoder and decoder for Python") + (description + "UltraJSON is an ultra fast JSON encoder and decoder written in pure C with +bindings for Python 3.") + (license license:bsd-3))) + +(define-public python-ujson-1 + (package + (inherit python-ujson) + (version "1.35") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ujson" version)) + (sha256 + (base32 + "11jz5wi7mbgqcsz52iqhpyykiaasila4lq8cmc2d54bfa3jp6q7n")))) + (arguments + '(#:phases %standard-phases)) + (native-inputs '()) + (home-page "http://www.esn.me") + (description + "UltraJSON is an ultra fast JSON encoder and decoder written in pure C with +bindings for Python 2.5+ and 3."))) + +(define-public python2-ujson-1 + (package-with-python2 python-ujson-1)) + +(define-public python-iocapture + ;; The latest release is more than a year older than this commit. + (let ((commit "fdc021c431d0840303908dfc3ca8769db383595c") + (revision "1")) + (package + (name "python-iocapture") + (version "0.1.2") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/oinume/iocapture") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1mkbhqibxvgwg0p7slr8dfraa3g2s6bsayladhax2jccwj4kcndz")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (invoke "py.test" "-v" "tests") + #t))))) + (propagated-inputs + `(("python-flexmock" ,python-flexmock) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-six" ,python-six))) + (home-page "https://github.com/oinume/iocapture") + (synopsis "Python capturing tool for stdout and stderr") + (description + "This package helps you to capture the standard out (stdout) and the +standard error channel (stderr) in your program.") + (license license:expat)))) + +(define-public python-argh + ;; There are 21 commits since the latest release containing important + ;; improvements. + (let ((commit "dcd3253f2994400a6a58a700c118c53765bc50a4") + (revision "1")) + (package + (name "python-argh") + (version (git-version "0.26.2" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/neithere/argh") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1p5h3dnpbsjmqrvil96s71asc6i3gpinmbrabqmwnrsxprz7r3ns")))) + (build-system python-build-system) + (propagated-inputs + `(("python-iocapture" ,python-iocapture) + ("python-mock" ,python-mock) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-xdist" ,python-pytest-xdist) + ("python-tox" ,python-tox))) + (home-page "https://github.com/neithere/argh/") + (synopsis "Argparse wrapper with natural syntax") + (description + "python-argh is a small library that provides several layers of +abstraction on top of @code{python-argparse}. The layers can be mixed. It is +always possible to declare a command with the highest possible (and least +flexible) layer and then tune the behaviour with any of the lower layers +including the native API of @code{python-argparse}.") + (license license:lgpl3+)))) + +(define-public python-ppft + (package + (name "python-ppft") + (version "1.6.6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ppft" version)) + (sha256 + (base32 + "1z1invkhszc5d2mvgr221v7cszzifcc77mz0pv3wjp6x5q2768cy")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; there are none + (propagated-inputs + `(("python-six" ,python-six))) + (home-page "https://pypi.org/project/ppft/") + (synopsis "Fork of Parallel Python") + (description + "This package is a fork of Parallel Python. The Parallel Python +module (@code{pp}) provides an easy and efficient way to create +parallel-enabled applications for @dfn{symmetric multiprocessing} (SMP) +computers and clusters. It features cross-platform portability and dynamic +load balancing.") + (license license:bsd-3))) + +(define-public python-pox + (package + (name "python-pox") + (version "0.2.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pox" version)) + (sha256 + (base32 + "0y17ckc2p6i6709s279sjdj4q459mpcc38ymg9zv9y6vl6jf3bq6")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (mkdir-p "/tmp/guix") + (setenv "SHELL" "bash") + (setenv "USERNAME" "guix") + (setenv "HOME" "/tmp/guix") ; must end on USERNAME... + (invoke "py.test" "-vv") + #t))))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("which" ,which))) + (home-page "https://pypi.org/project/pox/") + (synopsis "Python utilities for filesystem exploration and automated builds") + (description + "Pox provides a collection of utilities for navigating and manipulating +filesystems. This module is designed to facilitate some of the low level +operating system interactions that are useful when exploring a filesystem on a +remote host. Pox provides Python equivalents of several shell commands such +as @command{which} and @command{find}. These commands allow automated +discovery of what has been installed on an operating system, and where the +essential tools are located.") + (license license:bsd-3))) + +(define-public python-pathos + (package + (name "python-pathos") + (version "0.2.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pathos" version)) + (sha256 + (base32 + "0in8hxdz7k081ijn6q94gr39ycy7363sx4zysmbwyvd7snqjrbi1")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (setenv "PYTHONPATH" + (string-append (getcwd) ":" (getenv "PYTHONPATH"))) + (invoke "python" "./tests/__main__.py")))))) + (propagated-inputs + `(("python-dill" ,python-dill) + ("python-multiprocess" ,python-multiprocess) + ("python-pox" ,python-pox) + ("python-ppft" ,python-ppft))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://pypi.org/project/pathos/") + (synopsis + "Parallel graph management and execution in heterogeneous computing") + (description + "Python-pathos is a framework for heterogeneous computing. It provides a +consistent high-level interface for configuring and launching parallel +computations across heterogeneous resources. Python-pathos provides configurable +launchers for parallel and distributed computing, where each launcher contains +the syntactic logic to configure and launch jobs in an execution environment.") + (license license:bsd-3))) + +(define-public python-flit + (package + (name "python-flit") + (version "2.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "flit" version)) + (sha256 + (base32 + "0h5vvmqinqzn97mr3ix7zx53af9ad4fimjjwqpx88yp8qhz4r5bc")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ; XXX: Check requires network access. + (home-page "https://flit.readthedocs.io/") + (synopsis + "Simple packaging tool for simple packages") + (description + "Flit is a simple way to put Python packages and modules on PyPI. Flit +packages a single importable module or package at a time, using the import +name as the name on PyPI. All subpackages and data files within a package +are included automatically.") + (license license:bsd-3))) + +(define-public python-pathtools + (package + (name "python-pathtools") + (version "0.1.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pathtools" version)) + (sha256 + (base32 + "1h7iam33vwxk8bvslfj4qlsdprdnwf8bvzhqh3jq5frr391cadbw")))) + (build-system python-build-system) + (home-page + "https://github.com/gorakhargosh/pathtools") + (synopsis "Path utilities for Python") + (description "Pattern matching and various utilities for file systems +paths.") + (license license:expat))) + +(define-public python-fastentrypoints + (package + (name "python-fastentrypoints") + (version "0.12") + (source + (origin + (method url-fetch) + (uri (pypi-uri "fastentrypoints" version)) + (sha256 + (base32 + "02s1j8i2dzbpbwgq2a3fiqwm3cnmhii2qzc0k42l0rdxd4a4ya7z")))) + (build-system python-build-system) + (home-page + "https://github.com/ninjaaron/fast-entry_points") + (synopsis + "Makes entry_points specified in setup.py load more quickly") + (description + "Using entry_points in your setup.py makes scripts that start really +slowly because it imports pkg_resources. This package allows such setup +scripts to load entry points more quickly.") + (license license:bsd-3))) + +(define-public python-funcparserlib + (package + (name "python-funcparserlib") + (version "0.3.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "funcparserlib" version)) + (sha256 + (base32 + "07f9cgjr3h4j2m67fhwapn8fja87vazl58zsj4yppf9y3an2x6dp")))) + (native-inputs + `(("python-tox" ,python-tox))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "tox")))))) + (build-system python-build-system) + (home-page + "https://github.com/vlasovskikh/funcparserlib") + (synopsis + "Recursive descent parsing library based on functional combinators") + (description + "This package is a recursive descent parsing library for Python based on +functional combinators. Parser combinators are just higher-order functions +that take parsers as their arguments and return them as result values.") + (license license:expat))) + +(define-public python-speg + (package + (name "python-speg") + (version "0.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "speg" version ".zip")) + (sha256 + (base32 "0w9y4jf4787dzhy6rvhwi0mpl0r8qkqmqmyv2hpwdpv8w53yzjqh")))) + (arguments + `(#:tests? #f)) ;FIXME: tests fail, not sure why + (native-inputs + `(("unzip" ,unzip))) + (build-system python-build-system) + (home-page "https://github.com/avakar/speg") + (synopsis "PEG-based parser interpreter with memoization") + (description "This package is a PEG-based parser and interpreter with +memoization.") + (license license:expat))) + +(define-public python-cson + (package + (name "python-cson") + (version "0.8") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cson" version)) + (sha256 + (base32 "00cyvigg4npbph39ghkg77xbxisa6plf75vii24igxfizik0337f")))) + (build-system python-build-system) + (propagated-inputs + `(("python-speg" ,python-speg))) + (home-page "https://github.com/avakar/pycson") + (synopsis "Parser for Coffeescript Object Notation (CSON)") + (description "This package is a parser for Coffeescript Object +Notation (CSON).") + (license license:expat))) + +(define-public python-asynctest + (package + (name "python-asynctest") + (version "0.13.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "asynctest" version)) + (sha256 + (base32 + "1b3zsy7p84gag6q8ai2ylyrhx213qdk2h2zb6im3xn0m5n264y62")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "python" "-X" "dev" "-m" "unittest" "-v" "test"))) + (add-after 'unpack 'disable-tests + (lambda* _ + (substitute* "test/test_selector.py" + ;; XXX: This test fails for unknown reason inside the build + ;; environment. + (("def test_events_watched_outside_test_are_ignored") + "@unittest.skip('disabled by guix') + def test_events_watched_outside_test_are_ignored"))))))) + (home-page "https://github.com/Martiusweb/asynctest") + (synopsis "Extension of unittest for testing asyncio libraries") + (description + "The package asynctest is built on top of the standard unittest module +and cuts down boilerplate code when testing libraries for asyncio.") + (license license:asl2.0))) + +(define-public python-aionotify + (package + (name "python-aionotify") + (version "0.2.0") + (source + (origin + ;; Source tarball on PyPi lacks tests + (method git-fetch) + (uri (git-reference + (url "https://github.com/rbarrois/aionotify") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1sk9i8czxgsbrswsf1nlb4c82vgnlzi8zrvrxdip92w2z8hqh43y")) + (patches (search-patches "python-aionotify-0.2.0-py3.8.patch")))) + (build-system python-build-system) + (home-page "https://github.com/rbarrois/aionotify") + (synopsis "Asyncio-powered inotify library") + (description + "@code{aionotify} is a simple, asyncio-based inotify library.") + (license license:bsd-3))) + +(define-public python-forbiddenfruit + (package + (name "python-forbiddenfruit") + (version "0.1.3") + (source + (origin + ;; Source tarball on PyPi lacks Makefile that builds and runs tests + (method git-fetch) + (uri (git-reference + (url "https://github.com/clarete/forbiddenfruit") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1fp2xvdqpi910j9r3q68x38phpxbm700gjdi2m2j5gs91xdnyyh2")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "make" "SKIP_DEPS=1")))))) + (native-inputs + `(("python-nose" ,python-nose) + ("python-coverage" ,python-coverage))) + (home-page "https://github.com/clarete/forbiddenfruit") + (synopsis "Patch python built-in objects") + (description "This project allows Python code to extend built-in types.") + (license (list license:gpl3+ license:expat)))) + +(define-public python-shouldbe + (package + (name "python-shouldbe") + (version "0.1.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "shouldbe" version)) + (sha256 + (base32 + "16zbvjxf71dl4yfbgcr6idyim3mdrfvix1dv8b95p0s9z07372pj")) + (patches (search-patches "python-shouldbe-0.1.2-cpy3.8.patch")))) + (build-system python-build-system) + (propagated-inputs + `(("python-forbiddenfruit" ,python-forbiddenfruit))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/directxman12/should_be") + (synopsis "Python Assertion Helpers inspired by Shouldly") + (description + "Python Assertion Helpers inspired by Shouldly.") + (license license:isc))) + +(define-public python-k5test + (package + (name "python-k5test") + (version "0.9.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "k5test" version)) + (sha256 + (base32 + "1lqp3jgfngyhaxjgj3n230hn90wsylwilh120yjf62h7b1s02mh8")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six) + ;; `which`, `kadmin.local` binaries called inside library + ("which" ,which) + ("mit-krb5" ,mit-krb5))) + (native-inputs `(("mit-krb5" ,mit-krb5))) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-paths + (lambda* _ + (substitute* "k5test/realm.py" + (("'kadmin_local'") "'kadmin.local'"))))))) + (home-page "https://github.com/pythongssapi/k5test") + (synopsis "Library for setting up self-contained Kerberos 5 environments") + (description + "@code{k5test} is a library for setting up self-contained Kerberos 5 +environments, and running Python unit tests inside those environments. It is +based on the file of the same name found alongside the MIT Kerberos 5 unit +tests.") + (license license:isc))) + +(define-public python-gssapi + (package + (name "python-gssapi") + (version "1.6.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "gssapi" version)) + (sha256 + (base32 + "02i5s7998dg5kcr4m0xwamd8vjqk1816xbzldyp68l91f6bynwcr")))) + (build-system python-build-system) + (propagated-inputs + `(("python-decorator" ,python-decorator) + ("python-six" ,python-six))) + (inputs + `(("mit-krb5" ,mit-krb5))) + ;; for tests + (native-inputs + `(("python-shouldbe" ,python-shouldbe) + ("python-parameterized" ,python-parameterized) + ("python-k5test" ,python-k5test) + ("python-nose" ,python-nose))) + (home-page "https://github.com/pythongssapi/python-gssapi") + (synopsis "Python GSSAPI Wrapper") + (description + "Python-GSSAPI provides both low-level and high level wrappers around the +GSSAPI C libraries. While it focuses on the Kerberos mechanism, it should +also be useable with other GSSAPI mechanisms.") + (license license:isc))) + +(define-public python-check-manifest + (package + (name "python-check-manifest") + (version "0.37") + (source + (origin + (method url-fetch) + (uri (pypi-uri "check-manifest" version)) + (sha256 + (base32 + "0lk45ifdv2cpkl6ayfyix7jwmnxa1rha7xvb0ih5999k115wzqs4")))) + (build-system python-build-system) + (native-inputs + `(("python-mock" ,python-mock) + ("git" ,git))) + (home-page "https://github.com/mgedmin/check-manifest") + (synopsis "Check MANIFEST.in in a Python source package for completeness") + (description "Python package can include a MANIFEST.in file to help with +sending package files to the Python Package Index. This package checks that +file to ensure it completely and accurately describes your project.") + (license license:expat))) + +(define-public python-android-stringslib + (package + (name "python-android-stringslib") + (version "0.1.2") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://framagit.org/tyreunom/python-android-strings-lib") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0gij55qzzq1h83kfpvhai1vf78kkhyvxa6l17m2nl24454lhfin4")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) + (home-page "https://framagit.org/tyreunom/python-android-strings-lib") + (synopsis "Android strings.xml support") + (description "Android Strings Lib provides support for android's strings.xml +files. These files are used to translate strings in android apps.") + (license license:expat))) + +(define-public python-watchdog + (package + (name "python-watchdog") + (version "0.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "watchdog" version)) + (sha256 + (base32 + "07cnvvlpif7a6cg4rav39zq8fxa5pfqawchr46433pij0y6napwn")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'remove-failing + (lambda _ + (delete-file "tests/test_inotify_buffer.py") + (delete-file "tests/test_snapshot_diff.py") + #t))))) + (propagated-inputs + `(("python-argh" ,python-argh) + ("python-pathtools" ,python-pathtools) + ("python-pyyaml" ,python-pyyaml))) + (native-inputs + `(("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-timeout" ,python-pytest-timeout))) + (home-page "https://github.com/gorakhargosh/watchdog") + (synopsis "Filesystem events monitoring") + (description "This package provides a way to monitor filesystem events +such as a file modification and trigger an action. This is similar to inotify, +but portable.") + (license license:asl2.0))) + +(define-public python-wget + (package + (name "python-wget") + (version "3.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "wget" version ".zip")) + (sha256 + (base32 + "0qb0y7ipby42m4m7h0ipazpdyc3bn9xi46lvifcwwl5albn31rim")))) + (build-system python-build-system) + (native-inputs `(("unzip" ,unzip))) + (home-page "https://bitbucket.org/techtonik/python-wget/") + (synopsis "Pure Python download utility") + (description "The python-wget library provides an API to download files +with features similar to the @command{wget} utility.") + (license license:unlicense))) + +(define-public offlate + (package + (name "offlate") + (version "0.5") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://framagit.org/tyreunom/offlate") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "13pqnbl05wcyldfvl75fp89vjgwsvxyc69vhnb17kkha2rc2k1h7")))) + (build-system python-build-system) + (arguments + ;; No tests + `(#:tests? #f)) + (propagated-inputs + `(("python-android-stringslib" ,python-android-stringslib) + ("python-dateutil" ,python-dateutil) + ("python-gitlab" ,python-gitlab) + ("python-lxml" ,python-lxml) + ("python-polib" ,python-polib) + ("python-pyenchant" ,python-pyenchant) + ("python-pygit2" ,python-pygit2) + ("python-pygithub" ,python-pygithub) + ("python-pyqt" ,python-pyqt) + ("python-requests" ,python-requests) + ("python-ruamel.yaml" ,python-ruamel.yaml) + ("python-translation-finder" ,python-translation-finder) + ("python-watchdog" ,python-watchdog))) + (native-inputs + `(("qttools" ,qttools))) + (home-page "https://framagit.org/tyreunom/offlate") + (synopsis "Offline translation interface for online translation tools") + (description "Offlate offers a unified interface for different translation +file formats, as well as many different online translation platforms. You can +use it to get work from online platforms, specialized such as the Translation +Project, or not such a gitlab instance when your upstream doesn't use any +dedicated platform. The tool proposes a unified interface for any format and +an upload option to send your work back to the platform.") + (license license:gpl3+))) + +(define-public python-titlecase + (package + (name "python-titlecase") + (version "0.12.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "titlecase" version)) + (sha256 + (base32 + "0486i99wf8ssa7sgn81fn6fv6i4rhhq6n751bc740b3hzfbpmpl4")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/ppannuto/python-titlecase") + (synopsis "Capitalize strings similar to book titles") + (description + "Python-Titlecase is a Python port of John Gruber's titlecase.pl. +It capitalizes (predominantly English) strings in a way that is similar to +book titles, using the New York Times Manual of Style to leave certain words +lowercase.") + (license license:expat))) + +(define-public python-pypng + (package + (name "python-pypng") + (version "0.0.20") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pypng" version)) + (sha256 + (base32 "02qpa22ls41vwsrzw9r9qhj1nhq05p03hb5473pay6y980s86chh")))) + (build-system python-build-system) + (home-page "https://github.com/drj11/pypng") + (synopsis "Pure Python PNG image encoder/decoder") + (description + "The PyPNG module implements support for PNG images. It reads and writes +PNG files with all allowable bit depths (1/2/4/8/16/24/32/48/64 bits per +pixel) and colour combinations: greyscale (1/2/4/8/16 bit); RGB, RGBA, +LA (greyscale with alpha) with 8/16 bits per channel; colour mapped +images (1/2/4/8 bit). Adam7 interlacing is supported for reading and writing. +A number of optional chunks can be specified (when writing) and +understood (when reading): tRNS, bKGD, gAMA. + +PyPNG is not a high level toolkit for image processing (like PIL) and does not +aim at being a replacement or competitor. Its strength lies in fine-grained +extensive support of PNG features. It can also read and write Netpbm PAM +files, with a focus on its use as an intermediate format for implementing +custom PNG processing.") + (license license:expat))) + +(define-public python-fuzzywuzzy + (package + (name "python-fuzzywuzzy") + (version "0.18.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "fuzzywuzzy" version)) + (sha256 + (base32 + "1s00zn75y2dkxgnbw8kl8dw4p1mc77cv78fwfa4yb0274s96w0a5")))) + (build-system python-build-system) + (native-inputs + `(("python-hypothesis" ,python-hypothesis) + ("python-pycodestyle" ,python-pycodestyle) + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-levenshtein" ,python-levenshtein))) + (home-page "https://github.com/seatgeek/fuzzywuzzy") + (synopsis "Fuzzy string matching in Python") + (description "Approximate string matching using +@emph{Levenshtein Distance} to calculate the differences between +sequences.") + (license license:gpl2))) + +(define-public python2-fuzzywuzzy + (package-with-python2 python-fuzzywuzzy)) + +(define-public python-block-tracing + (package + (name "python-block-tracing") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "block_tracing" version)) + (sha256 + (base32 + "0s2y729qr5rs7n506qfh8cssk8m2bi6k2y5vbrh2z3raf2d01alz")))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; no tests + (home-page "https://github.com/rianhunter/block_tracing") + (synopsis "Protect process memory") + (description + "@code{block_tracing} is a tiny Python library that can be used to +prevent debuggers and other applications from inspecting the memory within +your process.") + (license license:expat))) + +(define-public python-gcovr + (package + (name "python-gcovr") + (version "4.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "gcovr" version)) + (sha256 + (base32 + "0gyady7x3v3l9fm1zan0idaggqqcm31y7g5vxk7h05p5h7f39bjs")))) + (build-system python-build-system) + (propagated-inputs + `(("python-lxml" ,python-lxml) + ("python-jinja2" ,python-jinja2))) + (home-page "https://gcovr.com/") + (synopsis "Utility for generating code coverage results") + (description + "Gcovr provides a utility for managing the use of the GNU gcov +utility and generating summarized code coverage results. It is inspired +by the Python coverage.py package, which provides a similar utility for +Python.") + (license license:bsd-3))) + +(define-public python-owslib + (package + (name "python-owslib") + (version "0.19.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "OWSLib" version)) + (sha256 + (base32 "0v8vg0naa9rywvd31cpq65ljbdclpsrx09788v4xj7lg10np8nk0")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; TODO: package dependencies required for tests. + (synopsis "Interface for Open Geospatial Consortium web service") + (description + "OWSLib is a Python package for client programming with Open Geospatial +Consortium (OGC) web service (hence OWS) interface standards, and their related +content models.") + (home-page "https://geopython.github.io/OWSLib/") + (license license:bsd-3))) + +(define-public python-docusign-esign + (package + (name "python-docusign-esign") + (version "3.1.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "docusign_esign" version)) + (sha256 + (base32 + "01f3h03vc97syjlmqyl7xa5j90pzgmwpspc5a0gra9saynnbkx37")))) + (build-system python-build-system) + ;; Testing requires undocumented setup changes, and so testing is disabled here. + (arguments `(#:tests? #f)) + (propagated-inputs + `(("python-certifi", python-certifi) + ("python-six", python-six) + ("python-dateutil", python-dateutil) + ("python-urllib3", python-urllib3) + ("python-pyjwt", python-pyjwt) + ("python-cryptography", python-cryptography) + ("python-nose", python-nose))) + (synopsis "DocuSign Python Client") + (description "The Official DocuSign Python Client Library used to interact + with the eSign REST API. Send, sign, and approve documents using this client.") + (home-page "https://www.docusign.com/devcenter") + (license license:expat))) + +(define-public python-xattr + (package + (name "python-xattr") + (version "0.9.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "xattr" version)) + (sha256 + (base32 + "0i4xyiqbhjz2g16zbim17zjdbjkw79xsw8k59942vvq4is1cmfxh")))) + (build-system python-build-system) + (propagated-inputs + `(("python-cffi" ,python-cffi))) + (home-page "https://github.com/xattr/xattr") + (synopsis + "Python wrapper for extended filesystem attributes") + (description "This package provides a Python wrapper for using extended +filesystem attributes. Extended attributes extend the basic attributes of files +and directories in the file system. They are stored as name:data pairs +associated with file system objects (files, directories, symlinks, etc).") + (license license:expat))) + +(define-public python-json-logger + (package + (name "python-json-logger") + (version "0.1.11") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-json-logger" version)) + (sha256 + (base32 + "10g2ya6nsvn5vxzvq2wb8q4d43i3d7756i5rxyjna6d0y9i138xp")))) + (build-system python-build-system) + (home-page + "https://github.com/madzak/python-json-logger") + (synopsis "JSON log formatter in Python") + (description "This library allows standard Python logging to output log data +as JSON objects. With JSON we can make our logs more readable by machines and +we can stop writing custom parsers for syslog-type records.") + (license license:bsd-3))) + +(define-public python-daiquiri + (package + (name "python-daiquiri") + (version "2.1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "daiquiri" version)) + (sha256 + (base32 + "1qmank3c217ddiig3xr8ps0mqaydcp0q5a62in9a9g4zf72zjnqd")))) + (build-system python-build-system) + (propagated-inputs + `(("python-json-logger" ,python-json-logger))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest) + ("python-setuptools-scm" ,python-setuptools-scm) + ("python-six" ,python-six))) + (home-page "https://github.com/jd/daiquiri") + (synopsis + "Library to configure Python logging easily") + (description "The daiquiri library provides an easy way to configure +logging in Python. It also provides some custom formatters and handlers.") + (license license:asl2.0))) + +(define-public python-pifpaf + (package + (name "python-pifpaf") + (version "2.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pifpaf" version)) + (sha256 + (base32 + "1gy9p4nqf70fh38wn4icyfm7i9wrvx22wnjpg71g89wxbz27igaa")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "python" "setup.py" "testr" "--slowest" + "--testr-args=until-failure")))))) + (propagated-inputs + `(("python-click" ,python-click) + ("python-daiquiri" ,python-daiquiri) + ("python-fixtures" ,python-fixtures) + ("python-jinja2" ,python-jinja2) + ("python-pbr" ,python-pbr) + ("python-psutil" ,python-psutil) + ("python-six" ,python-six) + ("python-xattr" ,python-xattr))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-os-testr" ,python-os-testr) + ("python-requests" ,python-requests) + ("python-testrepository" ,python-testrepository) + ("python-testtools" ,python-testtools))) + (home-page "https://github.com/jd/pifpaf") + (synopsis "Tools and fixtures to manage daemons for testing in Python") + (description "Pifpaf is a suite of fixtures and a command-line tool that +starts and stops daemons for a quick throw-away usage. This is typically +useful when needing these daemons to run integration testing. It originally +evolved from its precursor @code{overtest}.") + (license license:asl2.0))) + +(define-public python-pytest-check-links + (package + (name "python-pytest-check-links") + (version "0.3.0") + (source + (origin + (method url-fetch) + ;; URI uses underscores + (uri (pypi-uri "pytest_check_links" version)) + (sha256 + (base32 + "12x3wmrdzm6wgk0vz02hb769h68nr49q47w5q1pj95pc89hsa34v")))) + (build-system python-build-system) + (propagated-inputs + `(("python-docutils" ,python-docutils) + ("python-html5lib" ,python-html5lib) + ("python-nbconvert" ,python-nbconvert) + ("python-nbformat" ,python-nbformat) + ("python-pytest" ,python-pytest) + ("python-six" ,python-six))) + (native-inputs + `(("python-pbr-minimal" ,python-pbr-minimal))) + (home-page "https://github.com/minrk/pytest-check-links") + (synopsis "Check links in files") + (description "This package provides a pytest plugin that checks URLs for +HTML-containing files.") + (license license:bsd-3))) + +(define-public python-json5 + (package + (name "python-json5") + (version "0.8.5") + (source + (origin + ;; sample.json5 is missing from PyPi source tarball + (method git-fetch) + (uri (git-reference + (url "https://github.com/dpranke/pyjson5") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0nyngj18jlkgvm1177lc3cj47wm4yh3dqigygvcvw7xkyryafsqn")))) + (build-system python-build-system) + (home-page "https://github.com/dpranke/pyjson5") + (synopsis + "Python implementation of the JSON5 data format") + (description + "JSON5 extends the JSON data interchange format to make it slightly more +usable as a configuration language. This Python package implements parsing and +dumping of JSON5 data structures.") + (license license:asl2.0))) + +(define-public python-frozendict + (package + (name "python-frozendict") + (version "1.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "frozendict" version)) + (sha256 + (base32 "0ibf1wipidz57giy53dh7mh68f2hz38x8f4wdq88mvxj5pr7jhbp")))) + (build-system python-build-system) + (home-page "https://github.com/slezica/python-frozendict") + (synopsis "Simple immutable mapping for Python") + (description + "@dfn{frozendict} is an immutable wrapper around dictionaries that +implements the complete mapping interface. It can be used as a drop-in +replacement for dictionaries where immutability is desired.") + (license license:expat))) + +(define-public python-unpaddedbase64 + (package + (name "python-unpaddedbase64") + (version "1.1.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/matrix-org/python-unpaddedbase64") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0if3fjfxga0bwdq47v77fs9hrcqpmwdxry2i2a7pdqsp95258nxd")))) + (build-system python-build-system) + (home-page "https://pypi.org/project/unpaddedbase64/") + (synopsis "Encode and decode Base64 without “=” padding") + (description + "RFC 4648 specifies that Base64 should be padded to a multiple of 4 bytes +using “=” characters. However this conveys no benefit so many protocols +choose to use Base64 without the “=” padding.") + (license license:asl2.0))) + +(define-public python-py-cpuinfo + (package + (name "python-py-cpuinfo") + (version "5.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "py-cpuinfo" version)) + (sha256 + (base32 + "0045y6832gqjg63jmw0qj2jwyypgjwr7sfdq3lfv49b6fxpl5xic")))) + (build-system python-build-system) + (home-page "https://github.com/workhorsy/py-cpuinfo") + (synopsis "Get CPU info with Python") + (description + "This Python module returns the CPU info by using the best sources of +information for your operating system.") + (license license:expat))) + +(define-public python-canonicaljson + (package + (name "python-canonicaljson") + (version "1.1.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "canonicaljson" version)) + (sha256 + (base32 "09cpacc8yvcc74i63pdmlfaahh77dnvbyw9zf29wml2zzwqfbg25")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six) + ("python-frozendict" ,python-frozendict) + ("python-simplejson" ,python-simplejson))) + (home-page "https://github.com/matrix-org/python-canonicaljson") + (synopsis "Canonical JSON") + (description + "Deterministically encode JSON. + +@itemize +@item Encodes objects and arrays as RFC 7159 JSON. +@item Sorts object keys so that you get the same result each time. +@item Has no insignificant whitespace to make the output as small as possible. +@item Escapes only the characters that must be escaped, U+0000 to + U+0019 / U+0022 / U+0056, to keep the output as small as possible. +@item Uses the shortest escape sequence for each escaped character. +@item Encodes the JSON as UTF-8. +@item Can encode frozendict immutable dictionaries. +@end itemize") + (license license:asl2.0))) + +(define-public python-signedjson + (package + (name "python-signedjson") + (version "1.1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "signedjson" version)) + (sha256 + (base32 "0280f8zyycsmd7iy65bs438flm7m8ffs1kcxfbvhi8hbazkqc19m")))) + (build-system python-build-system) + (propagated-inputs + `(("python-canonicaljson" ,python-canonicaljson) + ("python-importlib-metadata" ,python-importlib-metadata) + ("python-pynacl" ,python-pynacl) + ("python-typing-extensions" ,python-typing-extensions) + ("python-unpaddedbase64" ,python-unpaddedbase64))) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm))) + (home-page "https://github.com/matrix-org/python-signedjson") + (synopsis "Sign JSON objects with ED25519 signatures") + (description + "Sign JSON objects with ED25519 signatures. + +@itemize +@item More than one entity can sign the same object. +@item Each entity can sign the object with more than one key making it easier to +rotate keys +@item ED25519 can be replaced with a different algorithm. +@item Unprotected data can be added to the object under the @dfn{\"unsigned\"} +key. +@end itemize") + (license license:asl2.0))) + +(define-public python-daemonize + (package + (name "python-daemonize") + (version "2.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "daemonize" version)) + (sha256 + (base32 "1hwbl3gf9fdds9sc14zgjyjisjvxidrvqc11xlbb0b6jz17nw0nx")))) + (build-system python-build-system) + (home-page "https://github.com/thesharp/daemonize") + (synopsis "Library for writing system daemons in Python") + (description "Daemonize is a library for writing system daemons in Python.") + (license license:expat))) + +(define-public python-pymacaroons + (package + (name "python-pymacaroons") + (version "0.13.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pymacaroons" version)) + (sha256 + (base32 "1f0357a6g1h96sk6wy030xmc1p4rd80a999qvxd28v7nlm1blsqy")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six) + ("python-pynacl" ,python-pynacl))) + (home-page "https://github.com/ecordell/pymacaroons") + (synopsis "Python Macaroon Library") + (description + "Macaroons, like cookies, are a form of bearer credential. Unlike opaque +tokens, macaroons embed caveats that define specific authorization +requirements for the target service, the service that issued the root macaroon +and which is capable of verifying the integrity of macaroons it receives. + +Macaroons allow for delegation and attenuation of authorization. They are +simple and fast to verify, and decouple authorization policy from the +enforcement of that policy.") + (license license:expat))) + +(define-public python-ldap3 + (package + (name "python-ldap3") + (version "2.7") + (home-page "https://github.com/cannatag/ldap3") + (source + (origin + (method git-fetch) + (uri (git-reference (url home-page) + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0xw9fkqld21xsvdpaqir8ccc2l805xnn9gxahsnl70xzp3mwl0xv")))) + (build-system python-build-system) + (arguments + '(#:tests? #f ;TODO: Tests need a real LDAP server to run + #:phases (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "nosetests" "-s" "test")) + #t))))) + (native-inputs + `(("python-nose" ,python-nose))) + (propagated-inputs + `(("python-gssapi" ,python-gssapi) + ("python-pyasn1" ,python-pyasn1))) + (synopsis "Python LDAP client") + (description + "LDAP3 is a strictly RFC 4510 conforming LDAP V3 pure Python client +library.") + (license license:lgpl3+))) + +(define-public python-boltons + (package + (name "python-boltons") + (version "20.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "boltons" version)) + (sha256 + (base32 + "0lrr40qqj3ch8xarvyzbnbjs79pz5aywklllq53l347h1b8xnkg4")))) + (build-system python-build-system) + (home-page "https://github.com/mahmoud/boltons") + (synopsis "Extensions to the Python standard library") + (description + "Boltons is a set of over 230 pure-Python utilities in the same spirit +as — and yet conspicuously missing from — the standard library, including: + +@itemize +@item Atomic file saving, bolted on with fileutils +@item A highly-optimized OrderedMultiDict, in dictutils +@item Two types of PriorityQueue, in queueutils +@item Chunked and windowed iteration, in iterutils +@item Recursive data structure iteration and merging, with iterutils.remap +@item Exponential backoff functionality, including jitter, through +iterutils.backoff +@item A full-featured TracebackInfo type, for representing stack traces, in +tbutils +@end itemize") + (license license:bsd-3))) + +(define-public python-eliot + (package + (name "python-eliot") + (version "1.12.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "eliot" version)) + (sha256 + (base32 "0wabv7hk63l12881f4zw02mmj06583qsx2im0yywdjlj8f56vqdn")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'remove-journald-support + (lambda _ + (for-each delete-file + '("eliot/tests/test_journald.py" + "eliot/journald.py")) + #t)) + (add-after 'remove-journald-support 'remove-eliot-prettyprint-tests + ;; remove command-line tool's tests. TODO eliot-prettyprint should + ;; be installed and these tests should pass. + (lambda _ + (delete-file "eliot/tests/test_prettyprint.py") + #t))))) + (propagated-inputs + `(("python-boltons" ,python-boltons) + ("python-pyrsistent" ,python-pyrsistent) + ("python-six" ,python-six) + ("python-zope-interface" ,python-zope-interface))) + (native-inputs + `(("python-black" ,python-black) + ("python-coverage" ,python-coverage) + ("python-dask" ,python-dask) + ("python-flake8" ,python-flake8) + ("python-hypothesis" ,python-hypothesis) + ("python-pytest" ,python-pytest) + ("python-setuptools" ,python-setuptools) + ("python-sphinx" ,python-sphinx) + ("python-sphinx-rtd-theme" ,python-sphinx-rtd-theme) + ("python-testtools" ,python-testtools) + ("python-twine" ,python-twine) + ("python-twisted" ,python-twisted))) + (home-page "https://github.com/itamarst/eliot/") + (synopsis "Eliot: the logging system that tells you why it happened") + (description + "@dfn{eliot} is a Python logging system that outputs causal chains of +actions: actions can spawn other actions, and eventually they either succeed +or fail. The resulting logs tell you the story of what your software did: what +happened, and what caused it.") + (license license:asl2.0))) + +(define-public python-pem + (package + (name "python-pem") + (version "20.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pem" version)) + (sha256 + (base32 + "1xh88ss279fprxnzd10dczmqwjhppbyvljm33zrg2mgybwd66qr7")))) + (build-system python-build-system) + (native-inputs + `(("python-certifi" ,python-certifi) + ("python-coverage" ,python-coverage) + ("python-pretend" ,python-pretend) + ("python-pyopenssl" ,python-pyopenssl) + ("python-pytest" ,python-pytest) + ("python-sphinx" ,python-sphinx) + ("python-twisted" ,python-twisted))) + (home-page "https://pem.readthedocs.io/") + (synopsis "Easy PEM file parsing in Python") + (description + "This package provides a Python module for parsing and splitting PEM files.") + (license license:expat))) + +(define-public python-txsni + ;; We need a few commits on top of 0.1.9 for compatibility with newer + ;; Python and OpenSSL. + (let ((commit "5014c141a7acef63e20fcf6c36fa07f0cd754ce1") + (revision "0")) + (package + (name "python-txsni") + (version (git-version "0.1.9" revision commit)) + (home-page "https://github.com/glyph/txsni") + (source + (origin + (method git-fetch) + (uri (git-reference (url home-page) (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0imfxx4yjj1lbq0n5ad45al3wvv4qv96sivnc1r51i66mxi658z8")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pyopenssl" ,python-pyopenssl) + ("python-service-identity" ,python-service-identity) + ("python-twisted" ,python-twisted))) + (synopsis "Run TLS servers with Twisted") + (description + "This package provides an easy-to-use SNI endpoint for use +with the Twisted web framework.") + (license license:expat)))) + +(define-public python-txacme + (package + (name "python-txacme") + (version "0.9.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "txacme" version)) + (sha256 + (base32 "1cplx4llq7i508w6fgwjdv9di7rsz9k9irfmzdfbiz6q6a0ykf1d")))) + (build-system python-build-system) + (propagated-inputs + `(("python-acme" ,python-acme) + ("python-attrs" ,python-attrs) + ("python-eliot" ,python-eliot) + ("python-josepy" ,python-josepy) + ("python-pem" ,python-pem) + ("python-treq" ,python-treq) + ("python-twisted" ,python-twisted) + ("python-txsni" ,python-txsni))) + (native-inputs + `(("python-fixtures" ,python-fixtures) + ("python-hypothesis" ,python-hypothesis) + ("python-mock" ,python-mock) + ("python-service-identity" + ,python-service-identity) + ("python-testrepository" ,python-testrepository) + ("python-testscenarios" ,python-testscenarios) + ("python-testtools" ,python-testtools))) + (home-page "https://github.com/twisted/txacme") + (synopsis "Twisted implexmentation of the ACME protocol") + (description + "ACME is Automatic Certificate Management Environment, a protocol that +allows clients and certificate authorities to automate verification and +certificate issuance. The ACME protocol is used by the free Let's Encrypt +Certificate Authority. + +txacme is an implementation of the protocol for Twisted, the event-driven +networking engine for Python.") + (license license:expat))) + +(define-public python-pysaml2 + (package + (name "python-pysaml2") + (version "5.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pysaml2" version)) + (sha256 + (base32 + "1h8cmxh9cvxhrdfmkh92wg6zpxmhi2fixq1cy4hxismmaar7bsny")))) + (build-system python-build-system) + (propagated-inputs + `(("python-cryptography" ,python-cryptography) + ("python-dateutil" ,python-dateutil) + ("python-defusedxml" ,python-defusedxml) + ("python-pyopenssl" ,python-pyopenssl) + ("python-pytz" ,python-pytz) + ("python-requests" ,python-requests) + ("python-six" ,python-six))) + (home-page "https://idpy.org") + (synopsis "Python implementation of SAML Version 2 Standard") + (description + "PySAML2 is a pure python implementation of SAML Version 2 Standard. +It contains all necessary pieces for building a SAML2 service provider or +an identity provider. The distribution contains examples of both. + +This package was originally written to work in a WSGI environment, but +there are extensions that allow you to use it with other frameworks.") + (license license:asl2.0))) + +(define-public python-click-plugins + (package + (name "python-click-plugins") + (version "1.1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "click-plugins" version)) + (sha256 + (base32 "0jr6bxj67vg988vkm6nz8jj98v9lg46bn49lkhak3n598jbrkas6")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-click" ,python-click))) + (synopsis "Extension for Click to register external CLI commands") + (description "This package provides n extension module for Click to +register external CLI commands via setuptools entry-points.") + (home-page "https://github.com/click-contrib/click-plugins") + (license license:bsd-3))) + +(define-public python-diceware + (package + (name "python-diceware") + (version "0.9.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "diceware" version)) + (sha256 + (base32 + "0klb0ysybzlh2wihvir82hgq62v0jjmlcqklwajyms7c0p529yby")))) + (build-system python-build-system) + (native-inputs + `(("python-coverage" ,python-coverage) + ("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner))) + (home-page "https://github.com/ulif/diceware/") + (synopsis "Generates memorable passphrases") + (description "This package generates passphrases by concatenating words +randomly picked from wordlists. It supports several sources of +randomness (including real life dice) and different wordlists (including +cryptographically signed ones).") + (license license:gpl3+))) + +(define-public pyzo + (package + (name "pyzo") + (version "4.10.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyzo" version)) + (sha256 + (base32 "1zplxcb78qy8qibifmnsx5i9gnlfmw9n6nr4yflsabpxw57mx4m1")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'fix-home-directory + (lambda _ + ;; Tests fail with "Permission denied: '/homeless-shelter'". + (setenv "HOME" "/tmp") + #t))) + ;; Tests fail with "Uncaught Python exception: invalid literal for + ;; int() with base 10: 'test'". + #:tests? #f)) + (propagated-inputs + `(("python-pyqt" ,python-pyqt))) + (home-page "https://pyzo.org") + (synopsis + "Python IDE for scientific computing") + (description + "Pyzo is a Python IDE focused on interactivity and introspection, +which makes it very suitable for scientific computing. Its practical +design is aimed at simplicity and efficiency. + +It consists of two main components, the editor and the shell, and uses +a set of pluggable tools to help the programmer in various ways. Some +example tools are source structure, project manager, interactive help, +workspace...") + (license license:bsd-2))) + +(define-public python-osc + (package + (name "python-osc") + (version "1.7.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-osc" version)) + (sha256 + (base32 + "0cnh0z5lnng7fh48nmfaqqn8j25k13gkd4rhxd3m6sjqiix9s3vn")))) + (build-system python-build-system) + (home-page "https://github.com/attwad/python-osc") + (synopsis "Open Sound Control server and client implementations") + (description + "@code{python-osc} is a pure Python library with no external +dependencies. It implements the @uref{http://opensoundcontrol.org/spec-1_0, +Open Sound Control 1.0} specification.") + (license license:unlicense))) + +(define-public python-voluptuous + (package + (name "python-voluptuous") + (version "0.11.7") + (source + (origin + (method url-fetch) + (uri (pypi-uri "voluptuous" version)) + (sha256 + (base32 + "0mplkcpb5d8wjf8vk195fys4y6a3wbibiyf708imw33lphfk9g1a")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/alecthomas/voluptuous") + (synopsis "Python data validation library") + (description + "Voluptuous is a Python data validation library. It is primarily +intended for validating data coming into Python as JSON, YAML, etc.") + (license license:bsd-3))) + +(define-public python-cmd2 + (package + (name "python-cmd2") + (version "1.0.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cmd2" version)) + (sha256 + (base32 + "1f18plbc9yyvhn0js3d2bii9yld8zfl775gxsaw9jza5pmlg9ss2")))) + (build-system python-build-system) + (propagated-inputs + `(("python-attrs" ,python-attrs) + ("python-colorama" ,python-colorama) + ("python-pyperclip" ,python-pyperclip) + ("python-wcwidth" ,python-wcwidth))) + (native-inputs + `(("python-codecov" ,python-codecov) + ("python-coverage" ,python-coverage) + ("python-doc8" ,python-doc8) + ("python-flake8" ,python-flake8) + ("python-invoke" ,python-invoke) + ("python-mock" ,python-mock) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-mock" ,python-pytest-mock) + ("python-setuptools-scm" ,python-setuptools-scm) + ("python-sphinx" ,python-sphinx) + ("python-sphinx-autobuild" ,python-sphinx-autobuild) + ("python-sphinx-rtd-theme" ,python-sphinx-rtd-theme) + ("python-tox" ,python-tox) + ("python-twine" ,python-twine) + ("which" ,which))) + (home-page "https://github.com/python-cmd2/cmd2") + (synopsis "Tool for building interactive command line applications") + (description + "Cmd2 is a tool for building interactive command line applications in +Python. Its goal is to make it quick and easy for developers to build +feature-rich and user-friendly interactive command line applications. It +provides a simple API which is an extension of Python's built-in @code{cmd} +module. @code{cmd2} provides a wealth of features on top of @code{cmd} to +make your life easier and eliminates much of the boilerplate code which would +be necessary when using @code{cmd}.") + (license license:expat))) + +(define-public python-pytidylib + (package + (name "python-pytidylib") + (version "0.3.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "pytidylib" version)) + (sha256 + (base32 + "1wqa9dv5d7swka14rnky862hc7dgk2g3dhlrz57hdn3hb7bwic92")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-before 'build 'qualify-libtidy + (lambda* (#:key inputs #:allow-other-keys) + (let ((libtidy (string-append (assoc-ref inputs "tidy") + "/lib/libtidy.so"))) + (substitute* "tidylib/tidy.py" + (("ctypes\\.util\\.find_library\\('tidy'\\)") + (format #f "'~a'" libtidy))) + #t)))))) + (inputs `(("tidy" ,tidy))) + (home-page "https://github.com/countergram/pytidylib") + (synopsis "Python wrapper for HTML Tidy library") + (description + "PyTidyLib is a Python package that wraps the HTML Tidy library. This +allows you, from Python code, to “fix” invalid (X)HTML markup.") + (license license:expat))) + +(define-public python2-pytidylib + (package-with-python2 python-pytidylib)) + +(define-public python-mujson + (package + (name "python-mujson") + (version "1.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "mujson" version)) + (sha256 + (base32 + "0wbj6r8yzsdx2b0kbldlkznr1a9nn33za2q9x3g0hbg420dwzn97")))) + (build-system python-build-system) + (home-page "https://github.com/mattgiles/mujson") + (synopsis "Use the fastest JSON functions available at import time") + (description "This packages selects the fastest JSON functions available +at import time.") + (license license:expat))) + +(define-public python-bashlex + (package + (name "python-bashlex") + (version "0.14") + (source + (origin + (method url-fetch) + (uri (pypi-uri "bashlex" version)) + (sha256 + (base32 + "1z9g96fgsfpdwawp4sb5x6hbdhmda7kgmcrqlf9xx4bs1f8f14js")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'build 'pregenerate-yacc-tables + (lambda _ + ;; parser.py caches tables, which attempts to write to site lib + ;; see https://github.com/idank/bashlex/issues/51 + (invoke "python" "-c" "import bashlex")))))) + (home-page + "https://github.com/idank/bashlex") + (synopsis "Python parser for bash") + (description "@code{bashlex} is a Python port of the parser used +internally by GNU bash. + +For the most part it's transliterated from C, the major differences are: + +@itemize +@item it does not execute anything +@item it is reentrant +@item it generates a complete AST +@end itemize +") + (license license:gpl3+))) + +(define-public python-jinxed + (package + (name "python-jinxed") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jinxed" version)) + (sha256 + (base32 + "1n7vl03rhjd0xhjgbjlh8x9f8yfbhamcwkgvs4jg7g5qj8f0wk89")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-before 'check 'set-environment-variables + (lambda* (#:key inputs #:allow-other-keys) + (let ((ncurses (assoc-ref inputs "ncurses"))) + (setenv "TERM" "LINUX") + (setenv "TERMINFO" (string-append ncurses "/share/terminfo")) + #t)))) + #:tests? #f)) ; _curses.error: setupterm: could not find terminal + (native-inputs + `(("ncurses" ,ncurses))) + (home-page "https://github.com/Rockhopper-Technologies/jinxed") + (synopsis "Jinxed Terminal Library") + (description + "Jinxed is an implementation of a subset of the Python curses library.") + (license license:mpl2.0))) + +(define-public python-blessed + (package + (name "python-blessed") + (version "1.17.8") + (source + (origin + (method url-fetch) + (uri (pypi-uri "blessed" version)) + (sha256 + (base32 + "1wdj342sk22hfrg0n91x2qnqsbzbiyq9y009v3pxnvfzn9bx0wbn")) + (modules '((guix build utils))) + (snippet + '(begin + ;; Don't get hung up on Windows test failures. + (delete-file "blessed/win_terminal.py") #t)))) + (build-system python-build-system) + (propagated-inputs + `(("python-jinxed" ,python-jinxed) + ("python-six" ,python-six) + ("python-wcwidth" ,python-wcwidth))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest))) + (home-page "https://github.com/jquast/blessed") + (synopsis "Wrapper around terminal capabilities") + (description + "Blessed is a thin, practical wrapper around terminal styling, screen +positioning, and keyboard input.") + (license license:expat))) + +(define-public python-readme-renderer + (package + (name "python-readme-renderer") + (version "26.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "readme_renderer" version)) + (sha256 + (base32 + "13fnrv7z3y0yfafzcjbl55cqxncvbxadr72ql4l29pgyvrqxpsfb")))) + (build-system python-build-system) + (propagated-inputs + `(("python-bleach" ,python-bleach) + ("python-docutils" ,python-docutils) + ("python-pygments" ,python-pygments) + ("python-six" ,python-six))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest))) + (home-page "https://github.com/pypa/readme_renderer") + (synopsis "Render README files in Warehouse") + (description + "Readme Renderer is a library that will safely render arbitrary README +files into HTML. It is designed to be used in Warehouse to render the +@code{long_description} for packages. It can handle Markdown, reStructuredText, +and plain text.") + (license license:asl2.0))) + +(define-public python-lazr-delegates + (package + (name "python-lazr-delegates") + (version "2.0.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "lazr.delegates" version)) + (sha256 + (base32 + "1rdnl85j9ayp8n85l0ciip621j9dcziz5qnmv2m7krgwgcn31vfx")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "python" "setup.py" "nosetests")))))) + (native-inputs + `(("python-nose" ,python-nose))) + (propagated-inputs + `(("python-zope-interface" ,python-zope-interface))) + (home-page "https://launchpad.net/lazr.delegates") + (synopsis "Easily write objects that delegate behavior") + (description + "The @code{lazr.delegates} package makes it easy to write objects that +delegate behavior to another object. The new object adds some property or +behavior on to the other object, while still providing the underlying interface, +and delegating behavior.") + (license license:lgpl3))) + +(define-public python-lazr-config + (package + (name "python-lazr-config") + (version "2.2.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "lazr.config" version)) + (sha256 + (base32 + "11xpddgyhyj7sf27wbmrq5lnqk21wnprx3ajycgwlxjamh6sgffd")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "python" "-s" "-m" "nose" "-P" "lazr")))))) + (native-inputs + `(("python-nose" ,python-nose))) + (propagated-inputs + `(("python-lazr-delegates" ,python-lazr-delegates) + ("python-zope-interface" ,python-zope-interface))) + (home-page "https://launchpad.net/lazr.config") + (synopsis "Create configuration schemas and process and validate configurations") + (description + "The LAZR config system is typically used to manage process configuration. +Process configuration is for saying how things change when we run systems on +different machines, or under different circumstances. This system uses ini-like +file format of section, keys, and values. The config file supports inheritance +to minimize duplication of information across files. The format supports schema +validation.") + (license license:lgpl3))) + +(define-public python-flufl-bounce + (package + (name "python-flufl-bounce") + (version "3.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "flufl.bounce" version)) + (sha256 + (base32 + "01lg1b0jpf8605mzaz9miq3nray6s7a7gc8n4wzg5nsxl8fglcp4")))) + (build-system python-build-system) + (propagated-inputs + `(("python-atpublic" ,python-atpublic) + ("python-zope-interface" ,python-zope-interface))) + (native-inputs + `(("python-nose2" ,python-nose2))) + (home-page "https://fluflbounce.readthedocs.io/en/latest/") + (synopsis "Email bounce detectors") + (description "The @code{flufl.bounce} library provides a set of heuristics +and an API for detecting the original bouncing email addresses from a bounce +message. Many formats found in the wild are supported, as are VERP and +RFC 3464.") + (license (list license:asl2.0 + license:lgpl3)))) ; only for setup_headers.py + +(define-public python-flufl-i18n + (package + (name "python-flufl-i18n") + (version "3.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "flufl.i18n" version)) + (sha256 + (base32 + "1flwpn1xhgc957zj3zxw92dhdjh0lsy0hdvzq32dzqpsajfsvq1r")))) + (build-system python-build-system) + (propagated-inputs + `(("python-atpublic" ,python-atpublic))) + (home-page "https://flufli18n.readthedocs.io") + (synopsis "API for Python internationalization") + (description + "This package provides a high level, convenient API for managing +internationalization translation contexts in Python application. There is a +simple API for single-context applications, such as command line scripts which +only need to translate into one language during the entire course of thei +execution. There is a more flexible, but still convenient API for multi-context +applications, such as servers, which may need to switch language contexts for +different tasks.") + (license license:asl2.0))) + +(define-public python-flufl-lock + (package + (name "python-flufl-lock") + (version "4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "flufl.lock" version)) + (sha256 + (base32 + "055941zyma3wfx25jhm8wcsghpv3jc3iwi1gdrdjhzcnfhn62lxq")))) + (build-system python-build-system) + (propagated-inputs + `(("python-atpublic" ,python-atpublic) + ("python-psutil" ,python-psutil))) + (home-page "https://flufllock.readthedocs.io") + (synopsis "NFS-safe file locking with timeouts for POSIX systems") + (description + "The @dfn{flufl.lock} package provides NFS-safe file locking with +timeouts for POSIX systems. It is similar to the @code{O_EXCL} option of the +@code{open} system call but uses a lockfile. Lock objects support lock-breaking +and have a maximum lifetime built-in.") + (license (list license:asl2.0 + license:lgpl3)))) ; only for setup_helpers.py + +(define-public python-flufl-testing + (package + (name "python-flufl-testing") + (version "0.8") + (source + (origin + (method url-fetch) + (uri (pypi-uri "flufl.testing" version)) + (sha256 + (base32 + "1nkm95mhcfhl4x5jgs6y97ikszaxsfh07nyawsih6cxxm6l62641")))) + (build-system python-build-system) + (native-inputs + `(("python-nose2" ,python-nose2))) + (home-page "https://gitlab.com/warsaw/flufl.testing") + (synopsis "Collection of test tool plugins") + (description + "This package contains a small collection of test tool plugins for +@code{nose2} and @code{flake8}.") + (license license:asl2.0)))